Gene information

Detail information of AfisC3G04498

Location

Gene	Chr	Start	End	Strand
AfisC3G04498	chr3	806920352	806921286	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020243700.1	2.9e-70	LOW QUALITY PROTEIN: transcription factor DIVARICATA-like
Swissprot	Q8S9H7.1	4.6e-60	Transcription factor DIVARICATA
trEMBL	A0A8B7BU63	3.7e-67	transcription factor DIVARICATA isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38090.1	58.59	8e-61	229		Duplicated homeodomain-like superfamily protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04498	AT2G38090.1	198	63	3	2	180	16	213	58.59	8e-61	229
AfisC3G04498	AT5G58900.1	175	48	4	13	175	32	205	65.14	2e-59	225
AfisC3G04498	AT5G01200.1	192	68	4	4	175	19	210	54.17	4e-50	194

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	14	60	33.6	2.9e-08
PF00249.28	Myb_DNA-binding	Domain	112	156	45.4	5.8e-12

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005829	C	cytosol
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009723	P	response to ethylene
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009787	P	regulation of abscisic acid-activated signaling pathway
GO:0009908	P	flower development
GO:0010116	P	positive regulation of abscisic acid biosynthetic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0030307	P	positive regulation of cell growth
GO:0048262	P	determination of dorsal/ventral asymmetry
GO:1901001	P	negative regulation of response to salt stress
GO:1901371	P	regulation of leaf morphogenesis
GO:2000469	P	negative regulation of peroxidase activity
GO:1905615

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network