result

Gene information

Detail information of AfisC3G04847

Location

Gene	Chr	Start	End	Strand
AfisC3G04847	chr3	862997591	862999450	-

Sequences

CDS

Protein

Gene

>AfisC3G04847
ATGACATTGATCGCAAAACTACAGCATAGAAATTTAGTCAGATTAGTCGGTTGCTGTGCACATGAAAATGAGAAGATGTTGATATATGAATACATGCCAAATAAGAGCTTGGATTCATTCCTTTTTGGTATGTAAAACCATCATTTTTCCATATATTTACTATGTTATTATCAACAAATTATATGAAACTTTTGGATAGATCCTGCAAAGCAACCTCTACTGGATTGGAACAAGCGATTCAGTATAATAGAAGGGATCGCCCGAGGGCTAGTTTATCTACATCGAGATTCGAGATTCAGAATCGTTCATCGTGACCTTAAAGCCAGCAACATTCTGCTTGATGTTGATATGAACCCTAAAATTTCTGATTTTGGTATGGCTAGAATTTTTGGGAGTGATCAGAATGAGCTGAACACTCGTAGGGTTGTTGGTACATTGTAAGTATAACCAAATACAAATCAACTCCATTAGGTTAAATAAAGTTTTTTTAAAAGAATAAATATGGTATATTATACGAGCATAACACTTATTAATCTTTGGAACCTCGGTGTAGTCTTATACCACTTGTTAGTTAAGCTAGTGTGTTTTATTTTTAGTGGAAATTAGTGACATATCCTTATTTTATAAACTTATTTGTTTTATACCCTACCCTTTTAGAAACTATTTTTGACATCTTTTTTTTATTCTTTCCTTTTTACTTCTTTCGCTTCCAAATTTAAAAGCGACCACTACGACGTGTCTTATGGCGATTCTGATTTATGAACTTATACCATAATAGCACATATTTAGGTTAGTAAAATTACCCAAATACCCACGTGAATTTCATTTTGTATTTTGAAAATATGGATGTGATTTATAAAAGAAAATTGGGAGGGAGATAATGCTAACTTTTTATACTCATAAGGATGTATGTCAATTTTTTTTATTTAAGTGAATGACTCATTATCTACATTGTGATTGCAGTGGATATATGTCACCTGAGTATGTAATGGGAGGTTTTTTCTCTTTCAAGTCCGATGTGTACAGCTTTGGAATACTGCTTCTGGAACTGGTGTGTGGAAGGCGTAACAACAGCTTCCGTCGTGTGCCTAACACACTCAACATTGTTGGCTATGTAAATAGTAAACTGAACTCTTTATAATTGCTTCAGGAACTTCCTTTTTCAGTAAATATACTTTCAAATTGTAAATTTGTATCCATCCTTTATTTTCAGTTTTGATAAACGAAAAACCTACATAAAACATTTTTGAATTATACTTCTAAAATTACTTTTGATAAAAAAAAATACTCTTCTTTTTCTTAAGTTAAGTCTAAACTTGATTGTTTCTAATGCCAAAACCTTTTTTTTGAATTTTTTTGGGGAAAAGTGACATCATTTGCAGTTTTATTGGAAATATTTGTGCTTTTTAAAACTACAAACTCTACAAATATGTACGTTTTAATTGAAACTAAAAACATTAATGTTTTTTAAAATTTTGTTTCTAAGAAGTGCTGACTATTTCGAAAACTTAACAAATGATGTTTTACAAAAGTTCTATTTTCATATTTTAGGCATGGAAATTGTGGGACAAGCAAAGAGCTGCTGAAATGATTGATCCTACGATTCTCGAATCATGCTCGATTCCTCAGGTCTTTCGATGCATACAGATCGGGTTATTGTGTGTGCAAGATACAGCGAATGATAGACCTGATATGCATTCTGTTGTTCTCATGTTAGCAAGGGATAGTTCTACACTTGCAATACCAAATGCACCATTGTTTATCATGGAAAATAGTCCTGTTCAACCTCCTTTGTTTTATGACATGGATGAAATCTGCTCTATTAATAATGTAACTATTACAGAACTTCGGGCAAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256478.1	4.3e-114	G-type lectin S-receptor-like serine/threonine-protein kinase B120
Swissprot	O81906.1	2.2e-91	G-type lectin S-receptor-like serine/threonine-protein kinase B120
trEMBL	A0A8B9A8X9	7.2e-103	uncharacterized protein LOC103696826

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21390.1	61.37	1e-94	343	B120	S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04847	AT4G21390.1	277	103	3	1	274	574	849	61.37	1e-94	343
AfisC3G04847	AT1G11330.1	274	123	0	1	274	567	840	55.11	3e-93	338
AfisC3G04847	AT1G11330.2	274	123	0	1	274	569	842	55.11	3e-93	338

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	3	224	133.2	8.8e-39

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000302	P	response to reactive oxygen species
GO:0042742	P	defense response to bacterium
GO:0005773	C	vacuole
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0005634	C	nucleus
GO:0012501	P	programmed cell death
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009751	P	response to salicylic acid
GO:0009875	P	pollen-pistil interaction
GO:0031625	F	ubiquitin protein ligase binding
GO:0046777	P	protein autophosphorylation
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network