result

Gene information

Detail information of AfisC3G04886

Location

Gene	Chr	Start	End	Strand
AfisC3G04886	chr3	869312379	869315059	-

Sequences

CDS

>AfisC3G04886
ATGGCGCTTTCAACCTCAAGCACACTCAAAACTTTTCTCCTCCTCCTCTTCTTCTTCAGCATCTCCTACGCGTTAAAAGACCAAGTTACCCTCAACCACTCCATTACTGGCTCCGAAAAGCTCGCATCCAAAGGTGGCAAATTTGAACTAGGATTTTTCCAACCAGGCAAATCTCGATATTACTATCTTGGAATACGGTACAGTCCTAACCTCGTATCTCAACAAACTTCAGTTTGGGTTGCCAACAGAGAAACTCCCTTAACTGATATTTCCAAAACAAATATTGCAATATCCGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCATAATACTCGTAAAGTAGTAGCTGTTCTTCTTGATAATGGTAACTTAGTTTTAAGAGATGCGTCAAATCCAAACGTTACTTTATGGCAGAGCTTCGACCATCCAACTCACACTTGGTTACCAGGCGCCAAGTTTGGACTAAACAAAGTAACCAAAGAGTTGCAAAGATTAATTTCCTGGAAAAATGAAGATGATCCTGCTCCTGGAATTTTCAGTTACCAAGCTGATCCGAACGGTACAAGTCAGTACTTCATACTCTGGAACAACTCCATCAAATGCTGGACCAGCGGCCTCTGGAATGGTCGTATTTTCAGTATGGTCCCTGAAATGAGTGATCCTTCCATTTCCGAATTCACTTATGTTTCCAATGACAGAGAAAACTACTTCATGTACACGATGGATAGCAACTACCCACTCATGACTAGGTTCGTAATGGACTTATCTGGCCAGACCAAGCAGTTTACTTGGGTGACCAACAGTAGTTGGCTCCCGCAGTGGATCCAACCTAGAAAACAATGTGATGTTTATGCTTTATGCGGTCCGTTCGGTGTCTGCAACGAGGTCGGTTTGCCATTTTGTAATTGTATCAGGGGGTTTAGCCAAAATTCTCCATCAGATTGGGCTTTGAGCGACTGGACAGGAGGCTGTGTTAGAAATACAAAACTGCAGTGTGAAAGCAGTGAAAAGGGTGAAAAAGATCGGTTCTTTATGATGCCCAACACTAGAATGCCTGCTGATCCTCGAAGTGTACAAGCTGAAAGTGCTTCTGATTCTGATTGTGAGTCTAATTGTTTGAACAACTGTTTGTGTACTGCCTACACTTATAATTCCAGCGGTTGCTTTGTTTGGCATGGCCCTTTGCTTAATCTACAAGATAGGTACAATGGTCCTAACGGAGACATTCTCTTTGTTCGTCTTGCCGCCTCTGAACTTCCTATTATACATAATAGCAAAATAGTTATAATCATTTCTGTAGTAGGCGGTGTTTTCAGTTTCTTAGTATTACTCGTTGCATGGTTGGTATATTGTTGGGGAAAAAGAATTTTACATGGGGCAAACGTTGTGGAAGGTGGTTTGATTGCATTTAGATACAATGAACTGCGACGGGCGACTAGGAATTTCTCAGAAAGACTAGGAGGAGGAGGTTTCGGATCAGTTTTCAAAGGAGTATTATCCGACTCATCATCTAGTGAGATGATAGCTGTGAAGCAACTAGAAGGAGTTAGACAAGGAGAAAAACAATTCAGAACGGAGGTGAGTACAATAGGAACAATACAACATGTGAATTTATTTCGACTACGTGGATTTTGCTCCGAGGGTCTGCACAAATTGTTAGTGTATGAGTACATGCCCAATGGTTCTTTAGATAGCAAACTGTTTGGTGATGATATCTGTTTAGATTGGAAAACAAGATACCAGATAGCGCTAGGAATGGCACGAGGATTGACTTATCTACATGAGAAATGTAGGGATAGCATTGTGCATTGTGATATAAAGCCTGAGAATGTACTTCTGGATGCTTCATTTGTGCCGAAAGTAGCGGATTTTGGAATGGCAAAATTAATAGGAAGGGATTTTAGTAGGGTATTGACTACGATGAGAGGGACAATAGGTTACCTTGCTCCGGAATGGATATCGGGAGTGGCAATAACAGCAAAGGCTGATGTATACAGCTATGGGATGATGCTTTTTGAGATACTTTCAGGTAAGAGAAATTTAAAAAAACCGCAAGGGCAGAAAATAAGCTATTTTCCTTTAGTGGCGGTGAGTAAAATGATGGAAGGGGATGTGATGACTTTGGTAGATGAGAAACTAGAACGGCGAGAGATTTTAGAAGAAGAAGTAATTAGGATTTGTAAAGTTGCATGTTGGTGCATACAAGAAGAAGAAGACTGTAGACCCTCGATGAGTCAAGTATTTCAAATGTTGGAGGGTGTTATGGAAGTTAGCATGCCACCCATTCCAAGAATGTTGCAGATACTTGCAGAAAATCCGGAAAATATTGATTTTTTTTTTCCAGGCTTTTCTGGAATAATGCAGGTAGTAACTACGTGA

Protein

Gene

>AfisC3G04886
CGAGATTATATACAGATATCATCTCATTTTCATCACTGAACCTTCATCACCCACGTATCAAATTCATGGCGCTTTCAACCTCAAGCACACTCAAAACTTTTCTCCTCCTCCTCTTCTTCTTCAGCATCTCCTACGCGTTAAAAGACCAAGTTACCCTCAACCACTCCATTACTGGCTCCGAAAAGCTCGCATCCAAAGGTGGCAAATTTGAACTAGGATTTTTCCAACCAGGCAAATCTCGATATTACTATCTTGGAATACGGTACAGTCCTAACCTCGTATCTCAACAAACTTCAGTTTGGGTTGCCAACAGAGAAACTCCCTTAACTGATATTTCCAAAACAAATATTGCAATATCCGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCATAATACTCGTAAAGTAGTAGCTGTTCTTCTTGATAATGGTAACTTAGTTTTAAGAGATGCGTCAAATCCAAACGTTACTTTATGGCAGAGCTTCGACCATCCAACTCACACTTGGTTACCAGGCGCCAAGTTTGGACTAAACAAAGTAACCAAAGAGTTGCAAAGATTAATTTCCTGGAAAAATGAAGATGATCCTGCTCCTGGAATTTTCAGTTACCAAGCTGATCCGAACGGTACAAGTCAGTACTTCATACTCTGGAACAACTCCATCAAATGCTGGACCAGCGGCCTCTGGAATGGTCGTATTTTCAGTATGGTCCCTGAAATGAGTGATCCTTCCATTTCCGAATTCACTTATGTTTCCAATGACAGAGAAAACTACTTCATGTACACGATGGATAGCAACTACCCACTCATGACTAGGTTCGTAATGGACTTATCTGGCCAGACCAAGCAGTTTACTTGGGTGACCAACAGTAGTTGGCTCCCGCAGTGGATCCAACCTAGAAAACAATGTGATGTTTATGCTTTATGCGGTCCGTTCGGTGTCTGCAACGAGGTCGGTTTGCCATTTTGTAATTGTATCAGGGGGTTTAGCCAAAATTCTCCATCAGATTGGGCTTTGAGCGACTGGACAGGAGGCTGTGTTAGAAATACAAAACTGCAGTGTGAAAGCAGTGAAAAGGGTGAAAAAGATCGGTTCTTTATGATGCCCAACACTAGAATGCCTGCTGATCCTCGAAGTGTACAAGCTGAAAGTGCTTCTGATTCTGATTGTGAGTCTAATTGTTTGAACAACTGTTTGTGTACTGCCTACACTTATAATTCCAGCGGTTGCTTTGTTTGGCATGGCCCTTTGCTTAATCTACAAGATAGGTACAATGGTCCTAACGGAGACATTCTCTTTGTTCGTCTTGCCGCCTCTGAACTTCCTATTATACATAATAGCAAAATAGTTATAATCATTTCTGTAGTAGGCGGTGTTTTCAGTTTCTTAGTATTACTCGTTGCATGGTTGGTATATTGTTGGGGAAAAAGAATTTTACATGGGGCAAACGTTGTGGAAGGTGGTTTGATTGCATTTAGATACAATGAACTGCGACGGGCGACTAGGAATTTCTCAGAAAGACTAGGAGGAGGAGGTTTCGGATCAGTTTTCAAAGGAGTATTATCCGACTCATCATCTAGTGAGATGATAGCTGTGAAGCAACTAGAAGGAGTTAGACAAGGAGAAAAACAATTCAGAACGGAGGTGAGTACAATAGGAACAATACAACATGTGAATTTATTTCGACTACGTGGATTTTGCTCCGAGGGTCTGCACAAATTGTTAGTGTATGAGTACATGCCCAATGGTTCTTTAGATAGCAAACTGTTTGGTGATGATATCTGTTTAGATTGGAAAACAAGATACCAGATAGCGCTAGGAATGGCACGAGGATTGACTTATCTACATGAGAAATGTAGGGATAGCATTGTGCATTGTGATATAAAGCCTGAGAATGTACTTCTGGATGCTTCATTTGTGCCGAAAGTAGCGGATTTTGGAATGGCAAAATTAATAGGAAGGGATTTTAGTAGGGTATTGACTACGATGAGAGGGACAATAGGTTACCTTGCTCCGGAATGGATATCGGGAGTGGCAATAACAGCAAAGGCTGATGTATACAGCTATGGGATGATGCTTTTTGAGATACTTTCAGGTAAGAGAAATTTAAAAAAACCGCAAGGGCAGAAAATAAGCTATTTTCCTTTAGTGGCGGTGAGTAAAATGATGGAAGGGGATGTGATGACTTTGGTAGATGAGAAACTAGAACGGCGAGAGATTTTAGAAGAAGAAGTAATTAGGATTTGTAAAGTTGCATGTTGGTGCATACAAGAAGAAGAAGACTGTAGACCCTCGATGAGTCAAGTATTTCAAATGTTGGAGGGTGTTATGGAAGTTAGCATGCCACCCATTCCAAGAATGTTGCAGATACTTGCAGAAAATCCGGAAAATATTGATTTTTTTTTTCCAGGCTTTTCTGGAATAATGCAGGTAGTAACTACGTGACAACAAGGATCGAAGGCTTTTCTTCTAGTTCCATGTTTTGATATCTAAGTATGTGTGACTAGAGTACTCAAAATATGTATTTGATTATTGTTTCTATCTTATCATTCACATACGAAATTGCTTGTATATATCGCGTATGTTAATTAGCACAAAGTTTGATATTCATTATTCTCCTTTTTGTGAGATTTTTTTAGTGAGAGTATG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	2.4e-290	uncharacterized protein LOC109834727
Swissprot	O64477.1	2.2e-203	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A6P5FFS0	6.5e-253	uncharacterized protein LOC109714840

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	52.29	0.0	763		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04886	AT2G19130.1	807	343	22	8	790	6	794	52.29	0.0	763
AfisC3G04886	AT4G00340.1	775	405	22	35	780	27	777	40.90	9e-145	511
AfisC3G04886	AT4G27290.1	775	445	19	3	758	1	733	34.71	1e-126	451

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	75	181	118.9	8.3e-35
PF00954.17	S_locus_glycop	Domain	213	321	99.0	1.9e-28
PF08276.8	PAN_2	Domain	348	408	54.6	7.3e-15
PF00069.22	Pkinase	Domain	494	760	163.9	4.2e-48

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0004672	F	protein kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0007154	P	cell communication
GO:0016310	P	phosphorylation
GO:0033993	P	response to lipid
GO:0051704	P	multi-organism process
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network