result

Gene information

Detail information of AfisC3G04986


Location
GeneChrStartEndStrand
AfisC3G04986chr3887080210887080971+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF3319913.17.0e-25GATA transcription factor 19-like protein
SwissprotQ9ZPX0.21.6e-18Protein HAN-LIKE 1
trEMBLA0A833QGA75.1e-25GATA transcription factor 19-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G18380.148.288e-24 106GATA20;HANL1GATA transcription factor 20

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Ortholog group
SpeciesGenes
Allium cepag147983.t1; g393953.t1
Allium fistulosumAfisC3G04986
Allium sativumAsa2G04200.1
Arabidopsis thalianaAT2G18380.1; AT4G36620.1
Oryza sativaLOC_Os01g47360.1; LOC_Os05g49280.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00320.24GATADomain9813264.35.1e-18

Gene Ontology
AccessionOntologyName
GO:0000977FRNA polymerase II regulatory region sequence-specific DNA binding
GO:0001085FRNA polymerase II transcription factor binding
GO:0001228Ftranscriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0003682Fchromatin binding
GO:0006366Ptranscription from RNA polymerase II promoter
GO:0005634Cnucleus
GO:0005667Ctranscription factor complex
GO:0006355Pregulation of transcription, DNA-templated
GO:0007623Pcircadian rhythm
GO:0008270Fzinc ion binding
GO:0009416Presponse to light stimulus
GO:0009735Presponse to cytokinin
GO:0009740Pgibberellic acid mediated signaling pathway
GO:0009910Pnegative regulation of flower development
GO:0010187Pnegative regulation of seed germination
GO:0010380Pregulation of chlorophyll biosynthetic process
GO:0030154Pcell differentiation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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