Detail information of AfisC3G05003


Location
GeneChrStartEndStrand
AfisC3G05003chr3890415508890434683+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020267466.11.7e-119ubiquitin-like-specific protease 1D
SwissprotQ2PS26.13.1e-78Protein OVERLY TOLERANT TO SALT 1
trEMBLA0A5P1EQZ11.2e-119ULP_PROTEASE domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G60220.149.122e-80 296OTS1;ULP1DUB-like protease 1D

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag224189.t1; g70919.t1
Allium fistulosumAfisC3G05003
Allium sativumAsa2G04218.1; Asa2G05009.1; Asa3G03324.1; Asa6G02363.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g53630.1; LOC_Os12g41380.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02902.16Peptidase_C48Domain283483127.36.7e-37

Gene Ontology
AccessionOntologyName
GO:0004175Fendopeptidase activity
GO:0009651Presponse to salt stress
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0016926Pprotein desumoylation
GO:0016929FSUMO-specific protease activity
GO:0044428Cnuclear part

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16287ULP1C_D; ubiquitin-like-specific protease 1C/DEC:3.4.22.68 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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