Detail information of AfisC3G05230
| Gene | Chr | Start | End | Strand |
|---|
| AfisC3G05230 | chr3 | 935287363 | 935292682 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020674728.1 | 5.2e-51 | nuclear transcription factor Y subunit B-3-like |
| Swissprot | Q9SFD8.2 | 9.8e-47 | Protein LEAFY COTYLEDON 1 |
| trEMBL | A0A835UQL1 | 1.5e-52 | CBFD_NFYB_HMF domain-containing protein |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT5G47670.1 | 61.78 | 2e-50 | 196 | L1L;NF-YB6 | nuclear factor Y, subunit B6 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC3G05230 | AT5G47670.1 | 157 | 46 | 3 | 76 | 232 | 53 | 195 | 61.78 | 2e-50 | 196 |
| AfisC3G05230 | AT5G47670.2 | 157 | 46 | 3 | 76 | 232 | 24 | 166 | 61.78 | 2e-50 | 196 |
| AfisC3G05230 | AT1G21970.1 | 152 | 55 | 2 | 61 | 211 | 41 | 190 | 61.84 | 1e-49 | 193 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00808.20 | CBFD_NFYB_HMF | Domain | 85 | 149 | 91.8 | 2.2e-26 |
| Accession | Ontology | Name |
|---|
| GO:0003700 | F | transcription factor activity, sequence-specific DNA binding
|
| GO:0044212 | F | transcription regulatory region DNA binding
|
| GO:0045893 | P | positive regulation of transcription, DNA-templated
|
| GO:0016602 | C | CCAAT-binding factor complex
|
| GO:0019760 | P | glucosinolate metabolic process
|
| GO:0032993 | C | protein-DNA complex
|
| GO:0043565 | F | sequence-specific DNA binding
|
| GO:0046982 | F | protein heterodimerization activity
|
| GO:0070491 | F | repressing transcription factor binding
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K08065 | NFYB, HAP3; nuclear transcription Y subunit beta | EC:- | Antigen processing and presentation | ko04612 |