result

Gene information

Detail information of AfisC3G05244

Location

Gene	Chr	Start	End	Strand
AfisC3G05244	chr3	938727316	938728852	+

Sequences

CDS

Protein

Gene

>AfisC3G05244
ATGGCGCGTGAAGTTCTGATTCACATCGACCATATTTTCTATGAAATTTTGATTCAAGTGAGAGGTTCAACGAGGTTGTTGGAAGTCCATATTACATGGCGCCTGAAGTTCCAAAAAGAAATTATGGATGTATGGAGTGCTGGGGTGATTTTATACATATCGTTGTGTGGTGTTCCTCCATTTTGGCAGGTAATCTTAAATGTTACTGGTTAATCTTTAGTAACATGCTTTTGATGGAAGGAGATATTGTTTTAAATTGCAGAAACCGATGAGGGAATTGCACAAGCAATTGTTAGGTCAGAAATTGGTTTTGAGAGGGAGCCATGGCCAAAGGTGTTAGAGAATGCGAAGGATCTTGTGAAACGTATGCTTGATTTGAACCCTTTTACAAGGCTAACAGCTAAAGAAGTTCTCAGTGAGTTCATCTTCATGTTTATATCAAAAGTCGAAGCCTGAAAATAACAGCTACTCTTTTCTTTGAAGAACATCCATGGATGCAAAATGCAAATACAGCTCCAAACATTCCACTTGGAGAAACAGTGAGATGCAGGCTGAAATAGTTCTCAGTAATGAACAAGTTCAAGAAGAAAGCATTGCCAGTAATTAGCTCTGAACCTTTGGCGGCTTTATGAAATACTGGAGCCTTATTATCAAAAAGCTGATATATGCTCTTGTATAGGTTGTAGCCGAGCATTTACCTGTAGAAGAAATAGCAGGATTCAAGGAGATGTTTCATATGATGGATAAAGATAAAAATGGAAATTTAACGCTTGAGGAACTCAAAGAGGGATTGCAAAATATGGGATCACCTATAGCAGACCCTGATGTTCAGATGTTAATGGAAGCAGTAAGTGCCCCTTGTCGTCCTGCCTCTATTGATGGTCAATATAATTTCTCCGATAATGCAGGAAACACACTTCAGATACAAATTGCATTTTAATTCCACTTCTGTACAACATCGGATCAGGATAGTTTAATGCATAAATCTGCTAAATTGTAGTTCATATGCAAAAATCATGTTCTTCATAGGCTCACATATTTCACGATGCAAACAAGATAAATGATTTCCTTCATATGTAACTATGACAGGCAGATGTTGATGGGAATGGTACACTAGACTGCGGTGAATTTGTACTGTATCAATTCACCTCAAAAAGATAAATAGTGAAGAGCATTTGTCAAAAGCTTTTAGATATTTTGATAAAGATGGGAATGGTTATATCGATATCCATGAACTGGGAGAAGCTTTGGCAGAGGGAGATCTTGGTCCTAATGAACAATTAATTAATGATATTATTTCTAATGTGAATGTTGATAAGGTATGTATGCATAAGTAAATTTTGCTACATTTACAAATAACTATCTTTTATTGGCATTACTTCCTTTGTAGGATGGTCGAATTAGTTATCCAGAATTTCAAATGATGATGGAAGCAGGAGTTGATTGGAAAAACACCTCATGCCAATACTCACGGGTTGTGTTTAACAACCTTAGTCACCGCATGTTTACAGTTGGATCTTTGAACAGACATGTAAAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK56846.1	9.7e-77	uncharacterized protein A4U43_C10F13710
Swissprot	Q2QVG8.1	1.7e-65	Calcium-dependent protein kinase 29
trEMBL	A0A5P1E768	7.0e-77	Calcium-dependent protein kinase 24

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G31500.1	47.04	9e-67	250	CPK24	calcium-dependent protein kinase 24

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G05244	AT2G31500.1	287	97	4	42	273	247	533	47.04	9e-67	250
AfisC3G05244	AT5G12480.1	290	100	4	42	278	240	529	47.24	2e-65	246
AfisC3G05244	AT5G12480.2	290	100	4	42	278	146	435	47.24	3e-65	245

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	42	110	31.6	9.1e-08
PF00036.29	EF-hand_1	Domain	138	164	28.6	5.4e-07
PF13499.3	EF-hand_7	Domain	185	247	44.3	1.6e-11

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0004698	F	calcium-dependent protein kinase C activity
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0009536	C	plastid
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth
GO:1901979	P	regulation of inward rectifier potassium channel activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network