result

Gene information

Detail information of AfisC3G05559

Location

Gene	Chr	Start	End	Strand
AfisC3G05559	chr3	990856505	990863854	+

Sequences

CDS

>AfisC3G05559
ATGGGTTGCTATCACAGCATAATCAGTATAAACCCAAATCATCAAATTGAGAAAATACCAAAAAATGAGGTAGAGGAAACCGAGAAAGCAAAATACAGGAAAATGGTGTTGGGTTTCAGCCTAATCATGGCCGCAATCAAAAGCAAGAGCTGGAAAATGAAAAGAAAAGGAAAAGGAGATAATAACAGTTCATGGCTTCTTGCTGAGAGTAAAAAAGATAGCATCTTGATCCTCGAAAACGACGAAGAAGAAGAAGGTGAAGATGAGCTGCAGTCAGTGCATTCTTCTTTCAGGTTCAGTTTTGGTTCTCAGGTCGAGTCTAACGAAAATGCGGGTCCCACATCTGGCGATGTGGGGCCTACAGTGTTCCTTTTGGTGAATTTGGAGGAGGAAGAAGATGATATGGAGAGGCGAAGGTGGAGGAGACTGGAATCTTTGGAGAGAGGCATTTCGCCTGTTTCGGGCTTGCTTCTCAGATTCACATTTTCTCAGATCAAGGCGGCTACTAGAGATTTTTCTAAAGGTAGGGAGCTTGGCAGAGGAGCGCTTAGTCGAGTATACAAAGGGAGAATAGGGGTGGGTCGAAACAGTTCTGTAGCAATAAAGAAAGTGATTGGAAATGATAGAGAGAGCGCCAAAGCATTTTGTAGAGAACTCATGATTGCATGCTCTCTTTGTCATTCGAACGTTGTTCCTCTTATTGGATACTGTGTCGACACTCAAGGCATCTTCCTCGTCTACAAGTATGTTTCTGGGGGTAGTTTGGACCAACACCTCCATCCTAGTGCAAAAACTAAGGTGTTATCTTGGGATGTCAGATATAAGGTTGCAGTAGGAGTAGCAGAGGCAATTGGATATTTGCATAACGGTACGAGCAAGTGTGTAGTGCACAGGGATATCAAGCCATCCAACATTCTTCTCTCCTCCAACAAAATTTCCAAATTATGCGACTTTGGGTTGGCTACATGGACTCATGGACCATCATTACCATTTCTTTGCAAATCCGTTAAAGGGACTTTTGGTTATTTGGCACCTGAATATTTTCAACATGGGAAGTTGTCGGATAAGACCGATGTATATGCATTTGGTGTGGTACTGCTTGAATTGGTTACAGGAAGAAAGGCGATTGACCGCTGTAAGCCTTTAGGAGAAGAAAACTTGGTGTTGTGGGCGAAACCCTACATGGAACAGGGAGAAACAGCCATGGAAAAACTAATCGATCCAAGACTAAGGCCAAAGTCATACAGATTCGATGAAGTGAGCAGAGTAGTACGTACAGCTTCAGCATGTTTACATAACGAAGATTCATTAAGGCCGAGCATCGATCAAGTGATAGATATGTTGCAGGCAGAAGAAGAGTTCAGTTGCAGCACCGACTGGTCAGTTTTTGCCAATAGTGGTAGATGTCTTTTGCCCATGCAGTTCGGTTCTCAGTTGCACGGGCGAAGCCCGGAAAAGGATGAGGTCATGAAGGGTCACTTGGCGCTAGCAATGCTTGGTGTTTCTGATGATGAAGATGAGTGA

Protein

Gene

>AfisC3G05559
CAAGCAAAGTTAACAGGAAAAGACTGCAAAAAGCACAAGCTTTTCCTTTTCTTCCAGATTATTATAGTTTAAAAAATAACTATCTACCAAAATCTCAACTTTTTTGATTCCTACTCTTTTCAGCCAAATGGGTTGCTATCACAGCATAATCAGTATAAACCCAAATCATCAAATTGAGAAAATACCAAAAAATGAGGTAGAGGAAACCGAGAAAGCAAAATACAGGAAAATGGTGTTGGGTTTCAGCCTAATCATGGCCGCAATCAAAAGCAAGAGCTGGAAAATGAAAAGAAAAGGAAAAGGAGATAATAACAGTTCATGGCTTCTTGCTGAGAGTAAAAAAGATAGCATCTTGATCCTCGAAAACGACGAAGAAGAAGAAGGTGAAGATGAGCTGCAGTCAGTGCATTCTTCTTTCAGGTTCAGTTTTGGTTCTCAGGTCGAGTCTAACGAAAATGCGGGTCCCACATCTGGCGATGTGGGGCCTACAGTGTTCCTTTTGGTGAATTTGGAGGAGGAAGAAGATGATATGGAGAGGCGAAGGTGGAGGAGACTGGAATCTTTGGAGAGAGGCATTTCGCCTGTTTCGGGCTTGCTTCTCAGATTCACATTTTCTCAGATCAAGGCGGCTACTAGAGATTTTTCTAAAGGTGAAATGTTATTTGTTTTCTGGATAATCAGATTTAGCTTCAAACTGTTCTTAAGCTCTTGAAAAAAATATGCATTAACACATAATGTATGTTGAGTAATTAGCAAGGAACTTTAGTACATTTAACTGGGATTTTGGTGCTTTTTTGGTAAAAAGATGAAATATTTGTATCAAAATTTTATATTTGAGTTGCTTTTAGGTGCATGTTTGTCCACTACTTCTGAGCAGTTAAAACAATCTGCAGCATATTTGTTGTTGATTGTGTTATTACAAATTGCTTAAACAGGTGATATAAGGTGCTTAAAAGTTGATAAGTCATATAAGCAAAAAAATACTTCCTGACATATTTGACTTTACAGCTAAATTTTGTTACAATTTCAACTCATTTATCCGAATGCTTTCACCATTTAAACTATTCACAACTACATTTGGTTTGGGTATTTATAAGATTAGTTGTTCCCATAAATACTCTACATATATAGTTGAATAAGAAATGTTGTTGGCTTTGTTGTGTATTCGTCTATGGCAAGAACAGGCATGTCTGTATACTTTCAGCAAAATATGTATTAACACACAATGATGTATACTGAGTTTTAGCAAAGAAATTTACTGCTTGAAATTTGGTCTTCCCACGTTTTGTTGAGATTTGATGTTTTGGTCAGATGAACTATTTTGGTGGTAGGAATGAACTGTTTATATGGAAATCTTATGTTTAAGTTGCTTTTACATATATAGTTGAACAATAAATGCAGTTGGTTTCATTGTGCTTTCCTCTTTTGCTTCATTTATACTTTGAACGACAAAAGCTGATTGAGAATTTAAATCACATCAGTGTGGTTAGAGGAGCACATTGATGGAGGATGATCAATTTATGTGACTAGCATCAGATTTGAACAAATTGTGTTTTAAGTGATTGTGCATATTATTATTATTATTATTATTTTTTTTTTTTTTTTGAAGTTTTCATGGATCAAATTCAAAATATAAATATTAAATGCAATTAGGTAGGGAGCTTGGCAGAGGAGCGCTTAGTCGAGTATACAAAGGGAGAATAGGGGTGGGTCGAAACAGTTCTGTAGCAATAAAGAAAGTGATTGGAAATGATAGAGAGAGCGCCAAAGCATTTTGTAGAGAACTCATGATTGCATGCTCTCTTTGTCATTCGAACGTTGTTCCTCTTATTGGATACTGTGTCGACACTCAAGGCATCTTCCTCGTCTACAAGTATGTTTCTGGGGGTAGTTTGGACCAACACCTCCATCCTAGTGGTATATTATTAGTCTCTCCTTCCCTTTTATTTATTTATTTTTTAAAAAACATTTGGTCTTCGATACCTAGATAAATCTAGCACTGTTAGCAAACTCGTAAAAAATATGAATTAGTTTCACAACACATGCATAGATGATTAGTATACGGATTTGTTGTGATCAATGTGATTTGACCCTTATAATGCTTTGGCTATATGTGCTATCTATTATTCGTATGGTTTATATGCTTTTTATATCCAAGTAAGTAGAACATTGTTCAAACCCCGAAGATATATACACAATGATCTCACAATACATACTTTCGGTTATTGTATAGTTTTTACGTCATTGTCAAGCTTCGATCATTCTACCACAACACAACCCGGATAGCTTGCAATGGAATTTACTGTCTTTTTTTTTTGTGTGTGACCCACCAAGGTATTTCTTGTAAACTGTAGGAAGTAAGCATCATACACACCTGGGTATGTCACATGGATAATGTAGCCAGTGTCATCATTGTGATTGTAGACACTTGCTTTTTTTCTTTTCTTTTTTTGCTAAATGGGCTATCATCCTTTAGGGGAAATTCTATTTGAACACAAAATGGGACACGAGATCTTGATCATTAGATCCCCTCCTGAATTCCACCTTCCATGTAAAGACAAAAAGATTCAATGGACAATACTTATTGTGTCTAGTTTTGTGTTTTATTTTGTGTCCCAACAGACGTTCCCTTCATTTAGGATTTCATATGCTGTTTTCTATTTTAGTATCAATAGGACATTATTTGTAAACTTCTAAAAGTATATATATACATGATCGTTCAGATTAGTATCAACCGTTGTGCCTCTGACTCTGTATTTAAATATTTCTGTACTTCTGATTTGGAATTTCAATATTTTTGGTCAGATTAGCTACTTATTGGGTATGTTCTATGGAAAAGAACCTTATTTCCCATTTGCATGTACATCAAATATTATCATAGCCTTTAAACTCAGCTCTCAAACATTCATATCTTCGCTTAACTTGACCAAAACATTTTTTTTAACTCAATCAAAAATTTAAAACTAAACTTGAAGCACAACTACTTATGCAGCAAAAACTAAGGTGTTATCTTGGGATGTCAGATATAAGGTTGCAGTAGGAGTAGCAGAGGCAATTGGATATTTGCATAACGGTACGAGCAAGTGTGTAGTGCACAGGGATATCAAGCCATCCAACATTCTTCTCTCCTCCAACAAAATTTCCAAAGTAAAAGATAATTTTTCCTTCAGCTTATTTTTCAAATTGAAGTTCACTCACTCATGGTAAATAAAACGACCTTTTTTTTCATATTGCCACCAGTTATGCGACTTTGGGTTGGCTACATGGACTCATGGACCATCATTACCATTTCTTTGCAAATCCGTTAAAGGGACTTTTGGGTAATGATTGGAAAATACAATTGTCAACTTAAAAGCTCTATGGCTATGCCTTTTGTGAGACTTATTTTTGGTTTTGAACATGCAGTTATTTGGCACCTGAATATTTTCAACATGGGAAGTTGTCGGATAAGACCGATGTATATGCATTTGGTGTGGTACTGCTTGAATTGGTTACAGGAAGAAAGGCGATTGACCGCTGTAAGCCTTTAGGAGAAGAAAACTTGGTGTTGTGGGTAAGCAATAAACTCTCTAATATGATAGCTCTCTGTGCTGATGATGTCTATTATATATGGTTAGGTTAATCAAACCAAGACCTTTTAGTTACTTAAATATGTCCCTTACTGCTATTATCAGTAATACCGGTATTATTTTTGATTTAACATTAGACATTATCAGTAATATGCTTAGGTGAATCAAACAAAGACTTTTTGTTACTCAACCAAGTTGTCGGATAAGATGGATGTATATGCATTGTCGGTAATACCATTATCATTTCAATTTACTGTACAGTGTTTTATTTGTTGCTATGTACGTAGTTAATATTGACAATATTAGTACGAACATAATTTTTGTAAGAAATCGGAGAAAATATGGATTCATGATTTTTTTATCCATATATTGGTGAGAGATTAGACCAATATTTGATGCAAATTTCCATGAAAATAGTTATATTTCGTCATTTTATGGATACTACACAAATACCTTATATCTTAAAGATTTTTTTAATATAAGTCACTTTTAAAAACTTGTTACGCAAATATGCAAGTTTCAAAATTATTTATAAGTATAGACCATTTTTTACCATGTCAGCGCCACGCTGGCGAAAATGCACATGTTGGTGACATTTCAAAATGCGCCAATATGTTAAAAATTTATATACTGATGCCTTTTCAAATGCCGTCCTCTTTCTGTCTTTATAAAATATTAAACAAAATTGGCGACTTTTGAAAAAAAAATCAATGTTATTTTCTAAAACAACAGTGGCGCCTTTTCAAATATTGCTAGTATGATTTAAAAAAATAAAATAAACTGACGACATTTCAAATGATGCCGTTACATTTTTGCCAACGTGACCGGTGACATGTCCAAAAGTGGCACATATTTGTAAATAAATATGTGTGTGTATAAAATTTGAACACAAATCGATGTCATAATTGGTAACATTAGATTTCAACCATTAGATCTCTCCTTGATTTCAATCTCATGTGGAATAATAAAATCCAACAATGATCGTTATGTCACATTTTGTGGCCAATTCATTTTTGATGTAAAAAATCATTGGAATTTGATATTTTTTGCATATGTGGGTTAATTGTCATGGGCATCATTTTTGCAAAAAATTACCTTTTTCCTATATCACGTAAATGCCTATTTTAAAAAAAATCAATGGTTATAATAAGTATTTTATGTAAATAACATATTGCATAATTAATTTTAAAGTTTTTATTTTTTATTTTTTGAAAACTTAGAAGAACCCGGTGGGCCGGTAAACTCCTGAAGAGAGTATAGTAAAGTCGTCCGCTGATCCAAACCCCTATACCCTTGATAAATTTATATAGTATAAGGAGGCGCATGGTAAGAATCAAACCTGAGTCTTTTTACCAAAACTCAAACCTCATTTCCACTGCGCCGCACCCGTGGACTAATTTTAAAGTTTTAAAGGCATCGGAATAATGTAAATTTTTGCAGGATGACGTCGATGATAAGTAAATCACAGATGAAAAAAAAAACTCAAATTCTACTGATCATGAGTACATAAAAGAAAATAAAAATCACATACAAATCAAAGATGCAAGAAAAGTTGGGATATGGATATTTGTACAACATATTTTTCACATATTTTGTGACGTAGGACCACTCCATTTTCAACCGTCGCTCCATTTCCAATGCATGCGAGACAGCCCTAACCCAAATAGTCGTATGATATTATTATTTCTTGGTTTCATATACTATATTTATTAGTTATAAGAATTTAAGATTCTTCACATTTGAAGTACTATAAATTAGCCATTGCTAAACTCAAGTATTCATACTAAATTCAGCATTAAAATTTTCTCCTTTTTTTAGTGGTATGTAGTTTATTTCTGTAATATGCATGTAGTAGCATCATCATATCCAATTTCAAGGTTTTTTTTATTTTGGTGGTGAAGTCATTCACTTAACTTCCATATTGGCTTAAATAGTTCAAAATGCCTGTTCAAAATGTTTGTCTTCAATTCAAGCCAGATCTTTGAGCAACACTCAAATGTTTCCCAGTGGGCTACATAAGTAGCACCATCGTGTTCATAAGCATTTATTCTAATCTAGTTTTTTTCTTTTTAAACTTCTACATTACTTAAATTCAAGATAGTATTAAATTTGACCCTGGAACGGAAGAACATTATGGAAGAGAAAAACTTCCATGCTTTAGTGCATGTAGTACACGGGTACTTTCGAACGTGGAAGTGCTATATGCGTATCCGAAATAATTTCGGATATCCACATCCGTGGCTATGGATGGATATCGGATAATTATCATATCCGCTAACATGGGATAAATCAAGAAACACGAATAGAAAATTTTGGTTTAACACAAATATCTTGTTAATCCCATTAATTATAAAAGTATGTAAGATCAACAAATATGATGATAATAAATAGTTTTGAGTAGTTAACCTGCATGAAATGCATATAATGTAAACTGTTAACTTAGTTAAAAAAATACATATCTTTCATTATGCTGAACTACACATAAAATAAATTGTATCTTGGCAAAAACCACACTTCGTATCCATGTTCGTATCCGTTTTTTTGGATATCGAATATTTATTTGTTTTTCGGATACGAATGCGGATGGATTTCGAATTTTTCGGGTATCCATTGACAGCCTTAAGTGCATGATGTAAACGCCCTACATTTACTGACCGTAACATGATTGTTCATTCACTTTATTCTGAATTAGCTTAAATAGTTTATCATCAATTTAAGCTAGATCTTTATGCAATACTCTAAATGTTGCAAAAAGGGCTACATAAATAGTATCATTATGGATCCGTTCTTTACGAAACAAGCGGGGCATTTGAGCGAGGAAGTTAGCTGAAAGGGGAATGTGTTTGATGATGCGAAAGGGATATTTTAGTGGAGTATGAAAAGGCTAAACGCATCGGACGCAATCCCCCAACCCACCATTTCCTCTTGTTCCCTCAACCGGCCGGTTGTGGGAAATGGTCCGTTGCCGCATCCGACGTGTGGGGAACGGGAACGGTGTAGAGGAATATCATTTTCTATTTCTTCTTTTTATTATTCTACATTACTATTATTTCAATATAGCTATTAAAATTGACTATAGAACATAAGAATATTAAGGTGCTACATAAAGTTTTAAAATATACTTTATTATCAAAATTCAAATAATAAACATTTGGTCTAATAATATCATGTTTAATTATTATTTTGAAATTTGTATATCGTCGTCGTCAAAACACCATGATGTAACATGATTGTTCATTCATAAATACAGGCGAAACCCTACATGGAACAGGGAGAAACAGCCATGGAAAAACTAATCGATCCAAGACTAAGGCCAAAGTCATACAGATTCGATGAAGTGAGCAGAGTAGTACGTACAGCTTCAGCATGTTTACATAACGAAGATTCATTAAGGCCGAGCATCGATCAAGTGATAGATATGTTGCAGGCAGAAGAAGAGTTCAGTTGCAGCACCGACTGGTCAGTTTTTGCCAATAGTGGTAGATGTCTTTTGCCCATGCAGTTCGGTTCTCAGTTGCACGGGCGAAGCCCGGAAAAGGATGAGGTCATGAAGGGTCACTTGGCGCTAGCAATGCTTGGTGTTTCTGATGATGAAGATGAGTGAAAATGGTGATGGATGGTTGCTAACTATACTTTGATTGGTGTTCTAATTTAGTTCAGGTTGTATATTGTTTCTTTTTTTTTAAAAAGGAAAAACAAAAAAACTTGTTTCTTGAAAAAGAGAAGTTGTAATTTTAATGATTTTTTTTATATTATTAATTGGTATTTAGCTTTATTTACG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020275232.1	3.5e-170	probable serine/threonine-protein kinase PBL7
Swissprot	Q5XF57.1	6.0e-58	Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBL	A0A5P1EKU5	7.9e-164	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G66460.1	52.45	2e-124	442		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G05559	AT1G66460.1	469	185	11	55	505	14	462	52.45	2e-124	442
AfisC3G05559	AT5G37790.1	471	181	10	64	507	97	546	51.38	9e-124	440
AfisC3G05559	AT1G77280.1	352	187	7	160	504	433	766	39.77	2e-67	253

Ortholog group

Species	Genes
Allium cepa	g183075.t1; g318001.t1
Allium fistulosum	AfisC3G05559
Allium sativum	Asa2G04560.1
Arabidopsis thaliana	AT1G66460.1; AT5G37790.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	173	445	152.7	1.1e-44

Gene Ontology

Accession	Ontology	Name
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005634	C	nucleus
GO:0009623	P	response to parasitic fungus
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0010068	P	protoderm histogenesis
GO:0010183	P	pollen tube guidance
GO:0012505	C	endomembrane system
GO:0019901	F	protein kinase binding
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048367	P	shoot system development
GO:0051020	F	GTPase binding
GO:0071323	P	cellular response to chitin
GO:0071369	P	cellular response to ethylene stimulus
GO:0090404	C	pollen tube tip
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network