result

Gene information

Detail information of AfisC3G05654

Location

Gene	Chr	Start	End	Strand
AfisC3G05654	chr3	1008493267	1008497285	+

Sequences

CDS

>AfisC3G05654
ATGTTCAGTATGAATCAAGAAAAGGATGAGTACCCTGAGTTTGTAGAGGTTGATCCTACAGGCAGATATGGCAGGTATAGTGAAATCCTAGGCAAGGGTTCTTCAAAAATTGTGTATAGAGCTTTTGATGAATATGAAGGAATAGAAGTAGCTTGGAATCAAGTAAAACTGTATGATTTTCTACAGAGCCCAGAAGATTTAGAAAGATTGTACTGTGAGATTCATTTGTTGAAGACTCTAAAACATAAGAACATAATGAAGTTTTATACTTCTTGGGTCGATACATCAAAGAGGAACATTAATTTCGTTACTGAGCTTTTCACTTCTGGTACTCTCAGACAGTATAGGCAAAGACATAAGAGAGTTAGCATTAGAGCATTGAAGCATTGGTGCAGGCAAATTCTGAAAGGACTTCTTTATCTTCATAGTCATGATCCTCCTGTAATTCATAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATCAAGGTGAAGTTAAAATTGGAGATCTTGGTCTTGCAGCTATTCTCAGAAAATCCCATGCTGCTCATTGTGTTGGAACACCGGAATTTATGGCACCTGAAGTATACGAAGAAGAATACAATGAATTGGTCGACATATACTCGTTTGGAATGTGTGTTTTAGAAATGGTGACTTTAGAGTATCCTTATAGTGAATGCACACACCCTGCTCAAATCTACAAAAAAGTTGTTTCGGGGACAAAACCAGAATCACTGTACAAAATAAAAGATCCCGAAGTCAGAAAATTTGTAGAGAAATGTTTAGTAACCGCATCAAAGAGACTTCCAGCAAGAGAGCTTTTAAAAGATCCTTTTCTTCAATTAGATGATCATACTCCAGTTCGCAATGAAGTAGAAGTTTACGATATTGGGTCCATCTTTAGACAACCTTCTCTTAATCATCTGAGCGCAAATGGTGTTTCGAACGGATATATGAATGATTATGACAACCAAAGAGAAGTCGTTAGTGGATGGGATTACGATGTAGCTGATATTTCTACACATGGGATGGACCTCTTCAATAATCATGAAGATGAACATAAGCAAAATGTCGATATCACGATCAAAGGTAGACGGAAAGAAGATGGTGGGATTTTTCTTCGCCTTAGGATTGCCGATAAAGATGGTCGGGTAAGGAACATATACTTCCCATTCGACATCGAAACGGACACGGCCCTAAGTGTGGCGACCGAGATGGTAGCGGAACTGGACATAACGGACTACGAAGTGACCCGAATCTCAGAAATGATCGACGAAGAGGTCTCCTCCCTAGTACCCGAATGGGAACCCGGACCCGGTATACCCGAAACCCCAAGACACCACCCCTACACCGGCCTATGCAACCATTGCGTGTCCCACGTGTCCTCCTCCTCCCTCCTCGACTACCTCTCCAAATCCCAATCCCTTACCCACTCCCAACAATCCTCCTCCTCCCACTGCTTCAACTGCATGGCCGTGCACGGTCGGTTCGAGCAAAACATCACCTACCAAGAAGAGCAAAACGTCATGGACGGCGCACCGGGTCTCTCCACCAGCCAATCCGACGAAGACTTCGAAAACGACGACAAACTAAAGCAGATCAACAACGCACGCCGTACCCGAATGGGCAAGTCTATGGGGGACCTCAACATCAGCTTCGACGTACCCGAATACTACTGGATGAACTTATCCGACGAGTCCGAGAACGAGATTAGGCAAGAGCTCAGATGGCTCAAGGCCAAGCATCAAAAAGAGCAAAGAGAGTACAAAGAATCGAGCCGGGTCCTTCATCCTTCTCCCGACCATCATCAAAGTTCGTCGATGAACGACACCTACTTTCAGATCATGGAGAATTTGGAAGGTTTGGATGTTTTCGCCGGCAATGTCTTTTACAACGACGGTTTGGTGCCTAATGGGCTTGCTAGAACCAAGTCACTGCCTGTAGATGCTGCTGAGGTTTGA

Protein

Gene

>AfisC3G05654
GGGCCATACAAAAAAGAAACATCAGAAATTATATATATGTGGTCATTTTACAGCTCCATGTGACAGTGATTAACTATAAAGTTAGTAAATATATAAAATACATAATATAATAAAAAAATTGGTCCTATCATCCAATTGTCCTCTCTTTGTACTCATTTTTTGCCTTCAGATTTAGACTTTTTAGAAATCTAAGTAAACAATAACATCTTTCTCTTCCTTTTTAGCATTTGTATTTCTCTGTACTTTCTTTCATTGTTTTTTAGCTCCTTTGAGCTTCATTTCCATTTTCATTTCATGCTCTTCATTTGAGTATATATGTTCAGTATGAATCAAGAAAAGGATGAGTACCCTGAGTTTGTAGAGGTTGATCCTACAGGCAGATATGGCAGGGTAGTTAATTAAGCTTTCAATCACTTGCTAATCTCCAATTTGATAAATGGGTGTTTGCTAATTCACTTAAATTTTGCTTCTTTTGCAGTATAGTGAAATCCTAGGCAAGGGTTCTTCAAAAATTGTGTATGTTATCACACTTCCGAAATGACCAAACTTGATAATTATATCATCTGGCTTTTACTTATTTTTCTGCTTATTTTTTCAGGTATAGAGCTTTTGATGAATATGAAGGAATAGAAGTAGCTTGGAATCAAGTAAAACTGTATGATTTTCTACAGAGCCCAGAAGATTTAGAAAGATTGTACTGTGAGATTCATTTGTTGAAGACTCTAAAACATAAGAACATAATGAAGTTTTATACTTCTTGGGTCGATACATCAAAGAGGAACATTAATTTCGTTACTGAGCTTTTCACTTCTGGTACTCTCAGACAGTAAGATCTCAAATTCCTTCTTCCCTTTTTTCTTTTCAGATATTTTTGTTACCGACCATTTTAAACTAATACTGATTAAATCCATATAGGTATAGGCAAAGACATAAGAGAGTTAGCATTAGAGCATTGAAGCATTGGTGCAGGCAAATTCTGAAAGGACTTCTTTATCTTCATAGTCATGATCCTCCTGTAATTCATAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATCAAGGTGAAGTTAAAATTGGAGATCTTGGTCTTGCAGCTATTCTCAGAAAATCCCATGCTGCTCATTGTGTTGGTAGGTTTACATTATTATTTTTCAATGTCAATTCCCAATATCTTCATGCACAATTTCGGACCATATTCAAATATGAATCTTGTTCATTGTTTTGAAAAATGTTGTTGTGACATCAGTCTAACATGCAGTTAGTTTACATAGATACCATCTGTAAAAAGCAGATGATGCTTAGATTGTTATTATTTTTGGCAGGAACACCGGAATTTATGGCACCTGAAGTATACGAAGAAGAATACAATGAATTGGTCGACATATACTCGTTTGGAATGTGTGTTTTAGAAATGGTGACTTTAGAGTATCCTTATAGTGAATGCACACACCCTGCTCAAATCTACAAAAAAGTTGTTTCGGTAAGATCTCTATTACATAAAACCTTCAAAATTGTTGCTCTTAGGCTACATGTTATTTTGTAGGGATACACCTATGTATGTACACCATCACATTTGTAAACCTATGTATCATGATTTTGGTATTCCACGACAGTAGATGATCTTCATCTTGATTCTTAAACCTTAGCAAATTTAAAACTATATCAGTAGAATGATAGTGTTATTGTAATTCAGGGGACAAAACCAGAATCACTGTACAAAATAAAAGATCCCGAAGTCAGAAAATTTGTAGAGAAATGTTTAGTAACCGCATCAAAGAGACTTCCAGCAAGAGAGCTTTTAAAAGATCCTTTTCTTCAATTAGATGATCATACTCCAGTTCGCAATGAAGTAGAAGTTTACGATATTGGGTCCATCTTTAGACAACCTTCTCTTAATCATCTGAGCGCAAATGGTGTTTCGAACGGATATATGAATGATTATGACAACCAAAGAGAAGTCGTTAGTGGATGGGATTACGATGTAGCTGATATTTCTACACATGGGATGGACCTCTTCAATAATCATGAAGATGAACATAAGCAAAATGTCGATATCACGATCAAAGGTAGACGGAAAGAAGATGGTGGGATTTTTCTTCGCCTTAGGATTGCCGATAAAGATGGTAAGATCAAAACCTCCTTGTTTCCATAATGAGAAAACTGAATACTTTTGTGCATTTTCAACAGTTTTGTTATAGATAGCTATAGCTAATTTTTACATCTCCTCTGATTCAAGACTAGAACACGGATACACTAACAAAGTTAGACACTCTACTTTGTTATTGATGGTATGATCCTCTAGTTCAAAACTAGAGTGGTGGTGCTCTGGCTTTCTTTGAATGCAATGCACCAGATATTTAGAGCAATTAGATTGATGATCTAATGGCCCTCTAAAATAACCAAAGCACCAGTACTTTGGTTTTTGAACTAGGGTATATGATCTAATTCCATGTTCCATTAGATGGTCATGAACAACCAGGTGCATTTTAGCAGATTAAAAAGATGCGAAAATGCACCGGTTCCGGGTTTTTCATGAACATTAGACTCATCAACATGCGTTTGTTAGTGTACCCCTGCTCAAATGATCTGATTCTAGTTGTTGTACCATATAATACGACGTGGAAATTAGGATCCGTTTCTTATTTTCAAACTTAAAACACGAAAAACTCATCTTAAACACATGTTTAAATTACAACTTTAAAATTATTTTCAACAATTTTATTTGTTTTTTTTCGCATATCAATTTTGCAGTCATCGTAAGTTTCTACGACCGAAATTAAACTTTTATAATTTTTTTGAATTTTGTTTCAAAAACACAAATATTTGCGGTGCAGTTCAACAAACTGCAAATTTTGTTGTTTATACTTCAACTATTTTTTGTTTACATCGTAAATATTTGCAATAGTTTGACTGAAACTAGAAATAATTGTGTTTTTTAAAGCATGTCTTTGGAAGGGCAGCTTTTGTATTTTGAAACTCAGAAATGATGTTTTACAAAAGTTCTCTAAAACAACTTCTAGCTAACCCGATAATACCCTTCTATAGGTCGGGTAAGGAACATATACTTCCCATTCGACATCGAAACGGACACGGCCCTAAGTGTGGCGACCGAGATGGTAGCGGAACTGGACATAACGGACTACGAAGTGACCCGAATCTCAGAAATGATCGACGAAGAGGTCTCCTCCCTAGTACCCGAATGGGAACCCGGACCCGGTATACCCGAAACCCCAAGACACCACCCCTACACCGGCCTATGCAACCATTGCGTGTCCCACGTGTCCTCCTCCTCCCTCCTCGACTACCTCTCCAAATCCCAATCCCTTACCCACTCCCAACAATCCTCCTCCTCCCACTGCTTCAACTGCATGGCCGTGCACGGTCGGTTCGAGCAAAACATCACCTACCAAGAAGAGCAAAACGTCATGGACGGCGCACCGGGTCTCTCCACCAGCCAATCCGACGAAGACTTCGAAAACGACGACAAACTAAAGCAGATCAACAACGCACGCCGTACCCGAATGGGCAAGTCTATGGGGGACCTCAACATCAGCTTCGACGTACCCGAATACTACTGGATGAACTTATCCGACGAGTCCGAGAACGAGATTAGGCAAGAGCTCAGATGGCTCAAGGCCAAGCATCAAAAAGAGCAAAGAGAGTACAAAGAATCGAGCCGGGTCCTTCATCCTTCTCCCGACCATCATCAAAGTTCGTCGATGAACGACACCTACTTTCAGATCATGGAGAATTTGGAAGGTTTGGATGTTTTCGCCGGCAATGTCTTTTACAACGACGGTTTGGTGCCTAATGGGCTTGCTAGAACCAAGTCACTGCCTGTAGATGCTGCTGAGGTTTGAAAAGTATAATTAATAGCATGCAAGTAAAAAAAAGAGGAAACTGCTTCACTGTTCATTTGGTTTATTGTTGTAAATCTTTTTATCTTTATTGTTGTCGATATGAAAAGAAATGAGTTAGCTTGCCAACTGTGTAACGTTCTACATGGCACATGG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257226.1	3.4e-258	probable serine/threonine-protein kinase WNK9
Swissprot	A2YMV6.2	6.1e-204	Protein kinase with no lysine 1
trEMBL	A0A5P1FAF8	2.4e-258	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G04910.1	57.61	0.0	739	ATWNK1;WNK1;ZIK4	with no lysine (K) kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G05654	AT3G04910.1	696	233	16	10	651	10	697	57.61	0.0	739
AfisC3G05654	AT3G04910.2	668	228	16	38	651	15	674	56.59	0.0	691
AfisC3G05654	AT3G22420.1	579	182	13	14	584	14	524	55.44	4e-172	602

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	27	281	169.3	9.3e-50

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007623	P	circadian rhythm
GO:0042802	F	identical protein binding
GO:0009911	P	positive regulation of flower development
GO:0046777	P	protein autophosphorylation
GO:0048573	P	photoperiodism, flowering

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08867	WNK, PRKWNK; WNK lysine deficient protein kinase	EC:2.7.11.1	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network