result

Gene information

Detail information of AfisC3G05670

Location

Gene	Chr	Start	End	Strand
AfisC3G05670	chr3	1010722661	1010728084	+

Sequences

CDS

Protein

Gene

>AfisC3G05670
ATGGACCAGCATATGAATATGAATATGAGTAGTTGGCTTGGTTTCTCTCTTTCACCATTAGGTGATTCTACTGCCATTTCAAATCAAAATGAGCAAAATTTTTGCTATGAAATTAGTAGTAATGGTAATATTAACAACAATAATAACAATTCTGATGCCTCTATTTGCTTCTTGGACCCACAATTTATGACTCCTAGTCATGACCATAATGGCTCAGGTATGTAAATTTTCTTCAATGTAATTTTAATCCCATTTCTTTTGTGTATTTTTATGTAAAGGGTGTGTTCTTTTAGTTCTTGTGTCACTGACTTCAAAGGCTGCAAAAAAAATTCATCAAATGTTGTTTGCATATGTTGCGTTTCATTCTTTTGGTTTATGGGTACATGTATTAGTTGCCAAAGTTTACATGTCTTAATATCACATGCATGTTTAACCTAAAATTTTTTAATTTGAAGTTATTGATGGGTTTTTAGTAAACTTGCAGTCATGAACTGAATCAAAATTCCTGGAAACTTAAACAGGATTTGGGTCTTCAATTGCATAACCAAATTTGAAAATATTATGACCCATCCATTTACCTTCCAATATTTGAAAGTTAGTTTAGTTTTAAAGGCAGAATATTATTAGTGAGCTTCTAATTCCACCATATAGTATTCTTTTCTAACACCAAATTTGAAAAATACCATCAAAAAACAGTTGTTGTTCATTCATCCTAATGCCAACAGTATTGAAACATATATTTACCATTTTCCAATATTAATTCTCCTAGTTTACAACATAATTACTTAATTCTAAAAACACTATGATGTTTCTTTTCTTGGTCAAGAATGTAATTAGATATTTTGAGTTCTAAATCTTTTTCATACATTATATGCAAATGTATAAAAACATGGTTTTAAAACTATGAAATATGTGCAATAATTAAGACTGTTTTGAGTGAAATATGCTATAAATTTTTGTAAGTAAATATTATATAAACTGCAATGGCTTAAATATAAATCAGCCATGAATAGTTGTTAACTTGTAGGATAATTTGGTAAAAGCAGCTGTTGTGAATATAATGGAGCTCATTTTGTCCCAAGGTGGTTTCTATAGTTGATGCAATCAATTTCCTTGGATGCATGTTTAAAGTCACAAGACTTTTTCCATATATGTGCATAGATTTGAGTACTTCTGCCAGTCTTTTAAATGCCTGTCATGTAGAGTAAATTTTTATGTACCGTTGAATTGTCTCAGTCATTTTTTATTTGATATTTTTTTACTAGCTGGGAGATTCTTTCTTTCTCTGCTCTCTGATGAGGTCTTCATGTGTACATTGTACTATATATTGTTTGTTCTCGTACAGAACATCAGAAATGAAAAAAAAAAACTAATTTAGTTTCTGCTACCACACACACATCCGTGGTAAATGACAAAAATGCCTCTAACCAAAGTGTTACAAGAAAATTCTCGCTTCAGCCCTTGAGTATTTGGAAAAATATCTTCTGCTCTACTCATTTATCAACGCAGATGTCATTCAATATTATATATCATTTGCATGTGTATTTGATTATTTATATTAATCTGTCATTTAGAATCCATTTGATGTATATCTTTAATCTAAACCATCAAGTTTAAAATCGAACAACCATATTGTATATGGTTGAACCTTTACTTTAGTAAGCAAATATCTAAGTCTCTAATATTTGACACGTGAATAACTAATCATAATTTCAACCTCTCAACATTTATAATATGAGAAAAGTGTTTATGCTAAGTCTACTTGATCAACGTAAATTAAGTAGCATATATTAGATGAACTACTGTTAGAGTGTCTTGCATTGAATGTGGGTAATTGACACATATTGAAAATAATAGTCTCACGTCGTGAAATATAATAATGGTGGAGCGATATATATACGAGTTTGATCATATATAACAACAAGATATTTCTTTTGTTAAAAATTGTTGACCAAATTGTACATCCACTCGCATAGAGATGTGCAGATGGATCCTGAAATTTCAACATCTATTAGTTGTTATAATGCTAAAGGGTGTTTGTATTTTGGCCAGAAGCACTGTAGCAACTAATGGATAGCTCAAGATTAATTTAAACAGGCTTAGCATTAACACTTTTGTTCTTACATTTTCAAAACTCAATAACCTTGAGTTATGCAATTTTGACAAGTGCTGAAGTATGATAAATTTCTGCTTCAACCATATCATGAAAGATAGTTCAGATGCAATCATATAGTTCAACACAACCTTGTAACTAGTTTTACTTAAATCTTCCCATTTCATTTTATAAACATAGATTGGAGCTATGGAGGTAACTCACAAGGCACAAACTGCCCGAAGCTTGAAAACTTCTTAGACGTCTACTCTGAGAAAGCAAACGAAGACAATACCCGAACCCAAAGCCCAAGACCACTTTCCCCGATTAACGAATTTTACTATCATCAAGACCCCAGTAGCCACACTGGGATAAATGTCAATATGCCCCTAGAGCAGCAAAGTTACATACATAGTCCCTATGCTAATTACAGGCCTAATCATAATACAAATCCTGCATATAGTGATGGGCTATATGGAACAACATCCTTGTCTTGTCTTAAGTCATGGTTGAGGCAAAATCCATGCCCTACGGAGAATCGTGAGTTGGTGGTGGTTGAGCCTAGTCATGTTGTGGTAGCTGAACCTTTGCAAGCTGTTGTGGAATCTCGAAAAAGACCTTCTTCTAAGGCTTTTAATCGTGATAGTGTCCCTCGTAAGTCCATTGAGACTTTTGGGCAGAGGACCTCACAGTATCGAGGTGTTACCAGGTATCATATATTGAATTAATGATGCATACTGTTAGCAAAGTTGATGCATTTTATAATTTTTAAATATGATGGTCTGTACATGTAGTTGTACATGTACTGTGATATTCCACATTAGAGTAAGTGATCTCAATCCAAATATCCTCTACTCTACTAGAAAAGTTGAACAATGGTTCACCCAGTTCTTTGGTCCATACGATAAAATGTCTAATGGTGTAGAGCAATGGTGCACCATGCATGTTAGCAAAAGTTAAACAAAAGCTCAAAATACACTGGTTTTTTAAGACATTAGATATTTGATCAATTTGTGAATGCATGCTTTAGTTTTTAATCTGAGCAGGTGATCCAGTTTTATGAATGAGCGTGTGTTTTTCGATCATATCAAATATTTAAGAACAAATTTTCAGTTTAGGTCTCTAGAAAAAAAAACCTATTTCATGTTTAGTTCTCGTTTGAAATTTATTATGAAAATAGGTCTCCTTTTTATAATATAGCGTTTCTGTACATGCGCAATCTATAAATGAGCATGTACAAAAATTTAATCTGTACATCCGTAAATGCAAAGTGCGCAGGAATATTATTTATAAAAAAAATTGTACATGCTTATTTATGTAATGCGCATATACAAACGCGTATTATGAAAAGGAGGCATATCCATAATAAATTTCAAACAAGACCTAAACTTGAAATAGGTCTTTTTCATAGGCCTAAAATCAAAATTTATCCAATATTTAATAGTATTCTGATCAATGACTGAATACCTGTTTTGGGTTTCAACTAAAGCCTTAAATGAGCAACTACATGCAACAGTAAAACAATTAACTTGTGTCTGTGAAGGCATAGGTGGACAGGAAGATATGAAGCACATTTATGGGACAACAGTTGTAGAAAAGAAGGCCAGACTAGGAAAGGAAGACAAGGTCCGATTCGATTATCCTTTTTCTTTTTCTTTCAAAATATATTTACCTGAACTTTATTTACTTAACTAACTCTACGTTGTGTTTCATTTGCTCTGGTGAAAAAATCGTTCAGTTTATCTAGGTATGAAGTTTAATTTAATATAGTCTAACTTGAAGTTTTGGGTTTATAGTAAACTAAGCTATAAGATATGATTTAGGGGGCTATGATAAGGAGGATAAGGCAGCAAGAGCATATGATTTAGCTGCACTTAAGTACTGGGGTCCTTCAACTCATATAAATTTCCCTGTATGTATACGTATTTCTAGTTTTCAAACTATATTTTTCTCTTCATGTAAACAATTATGATTTCTGATTATATTTCTGTCTCTCAGTTGAGTACATATGAGAAAGAGCTGGATGAGATGAAGCACATGTCAAGACAAGAATTTGTAGCTCACTTAAGAAGGTTTGTTATAACTGAAAATTTTCATTATCATACACTGAACCTCTTCATTTTTTTTCATAAGTTCACAGACATCCATTGTAACTTGTTATGATAAGTATGCATTAAATAATACATAAGGGGACTTCTTGATTATATTTAACAGGAAAAGCAGTGGATTTTCAAGAGGGGCATCAGCATACAGAGGAGTGACAAGGTTCTGCCATGGCCCTTACTTCTTCAGCATATAAACCCATCAATTTTTTTTATCACTATGCAAAACTAAAAAATATCTCATCATAATATAATCTTTTTAATTATATTATCTTCCACTAGGCATTTGATTATTATAACTATATTGTATGTGTGAAAACTAGGCATCACCAACATGGGAGATGGCAAGCGAGAATTGGAAGAGTGGCAGGAAACAAGGATTTGTATCTTGGAACATTCAGTGAGTTCTTTATTCATTTTTTAATTTTTTAATATCTACATGCTTACAGTAGACTATGATAATTTAGTTGTATAGGAACGTGGATATGATTGTTAAGTAGTTTTATAGTGAACATAAACTTCTAAATAATTTTGGGTGAATATTAACTGATAAGTAATTTTGAGTGAACGATAATATAATTACATATGAATATGAATATGACTAGTAACTTTTACGTAGCTTTGAGTCGCATGTTGAAATTATGGTAAAGTCATATGAAAATTTTGAAACTTATCATAAGCAAATATGCATGACTTATCAACTTGTTTACTACTTTTAATAAAAACAAATAAGTTGTTATTAAATGCTTCAAATTTCAAAATTTGCTTGGTAACTACTTTTGCTACTTATAATCTATTGTGAAGGATCCTCCTATGCTATAATAGACATCTCAAAAATGATTTATTTATTTATTTATCATCATCATCGTTATTTTTGAAGGCACTCAAGAGGAAGCTGCAGAAGCATACGACATAGCGGCAATAAAGTTCCGGGGAGTGAACGCAGTAACCAACTTCGACATATGCAGATACGATGTCAAAAGAATATGCTCGAGCAGCCAGCTTATAAGCAGCGATCTAGCCAAGCGCTCTCCCAAGTCGACTGACACAAGCTCAAGTGGGCCAGCCGAAGTTGGGTCAGAGATGGTACTGGCTTCAAAGCCCAGCCCACAGTGCGATGAGCCTGGTTCAAGTCAAGCTGTCTTCTATTCTAAGTGTGATAATGGGTCAGGACAGTTAGCTGTTCCTGCTGCACATTCACTTCCTATGTTTTCTTTATGGAATGAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256794.1	1.1e-152	AP2-like ethylene-responsive transcription factor AIL1
Swissprot	Q1PFE1.1	5.0e-102	Protein AINTEGUMENTA-LIKE 1
trEMBL	A0A5P1FEB5	7.9e-153	AINTEGUMENTA-like 6

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G72570.1	80.62	5e-108	388		Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G05670	AT1G72570.1	227	43	1	198	424	186	411	80.62	5e-108	388
AfisC3G05670	AT5G57390.1	216	45	1	209	423	175	390	78.70	3e-101	365
AfisC3G05670	AT4G37750.1	430	165	11	26	423	59	470	50.00	6e-101	364

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	235	294	44.4	1.3e-11
PF00847.17	AP2	Domain	338	388	37.8	1.5e-09

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000723	P	telomere maintenance
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006110	P	regulation of glycolytic process
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009737	P	response to abscisic acid
GO:0009744	P	response to sucrose
GO:0009873	P	ethylene-activated signaling pathway
GO:0010022	P	meristem determinacy
GO:0010077	P	maintenance of inflorescence meristem identity
GO:0010092	P	specification of organ identity
GO:0010187	P	negative regulation of seed germination
GO:0010449	P	root meristem growth
GO:0019432	P	triglyceride biosynthetic process
GO:0040008	P	regulation of growth
GO:0045723	P	positive regulation of fatty acid biosynthetic process
GO:0048506	P	regulation of timing of meristematic phase transition
GO:1901959	P	positive regulation of cutin biosynthetic process
GO:1904278	P	positive regulation of wax biosynthetic process
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09285	OVM, ANT; AP2-like factor, ANT lineage	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network