result

Gene information

Detail information of AfisC3G05774

Location

Gene	Chr	Start	End	Strand
AfisC3G05774	chr3	1028174163	1028175578	-

Sequences

CDS

>AfisC3G05774
ATGTTCGTCTTCCGTCTGAATTTTTCCTTAACCAAACACTTCATGAAATCGTACTGTTCAACTTCAATAGACCCATCATCATCTCTTACTCTTCATTTCCTAAAAACTTCATGTGGTCTTTCTCAAGAGTCCGCGCTTGCTATTTCACAAAAGGTTCATTTTAAAAGAACAACAATACCTCATTCAGTCCTCTCCCTTCTCAAGTCCTATAATTTTTCAAAATCCGATATCAAAAAAGTAGTAACCCGTGTTCCGGAACTCCTTGTAAGCAATCCAGACAAAACTTTAAAGCCCAAACTTGAATTTTTTGAAAAGATTGGTTTCTCAGGCCATGCATTGATATTCCTCATCACTTGCGTTCCCACTTTGCTCCAATTCAGCTTGGAGAACATGCTCCTTCCAAACCACAAAAAATTAAAAGCTGTTTTACGTACAGATGAAAATGTAATATCGGCCATAAAAAGTTCAAGTGCATTGCTTGTGTCAGATCTTGATAAAACTTTCTTACCCAAGGTTAAAATTCTTGAAGAGAATGGTGTTTCTGATGATGTTATACTTAAGTTGTTGACTAATTATAACAAGCAAGTGGTGCTGAAGCCTTATAGGTTTGATGAAATATTTGATTTTGTCAAAAAGATTGGGATTAGTCCAAAAAGTCCAATGTATGTCCATGCTTTTCGTGTGCTTGGTAGAATGAGAGGAAACGAATGGGAAATGAAAGTTGAAAATTTCAAGAAATTAGGGTGGACCGAAGAGGAGGTTCTGTTTGCATTCACAAAACATCCTTATTGTATGAGTGCATCAGTTGATAAAATCACAAAGAATTCGGAATTTTTCAAGGAGAAATTTGGTTGGGATTCAAATTTTGTTTCGAGAAATTCAGGTGTGCTTTCTTTTAGTTTTGAGAAAAGAGTTTTGCCGCGATACAAAATTTTAAATATATTAGAAAGCAAAGGGTTGCATAGTGGAAAAGTTGGAACTAACCATTTGAAGTTAAGTGAAAAGGATTTCTTGGTGAAATATGTTATGAAATATTACAAAGAAGTTTTGGAGGTGGTTGATGATGATATCAGGTGTAGATTGGAAGAATTAGGGTTGTTGAAGAGGAGTAACTAG

Protein

Gene

>AfisC3G05774
GCAGGTTAAGAAAAAAATCATCTACTCTTGATATTGATGAAATTAAGAGCTTAAGAATTTTTGATGAAATTGAGAGCTTGAGAAAAGAATTTGCTTGTGCAGGTGGAGAAAAAGGTTCCTTGGCATCCGACCCTTGTTTTGCGTATGTGTTGCTAATTGTTCATCAGAAGCTTTTTGCGTCGCCTTGTTCATTTCTTCCGGCAGTATTTTTATCGTGCAAAAGTTGGTATTCTAGCATCCTTTTTCAAATATTGGCACACAAGTTGTTTGATAAAATTCTCAATACGATTGAGGTAGAAAATGTTCGTCTTCCGTCTGAATTTTTCCTTAACCAAACACTTCATGAAATCGTACTGTTCAACTTCAATAGACCCATCATCATCTCTTACTCTTCATTTCCTAAAAACTTCATGTGGTCTTTCTCAAGAGTCCGCGCTTGCTATTTCACAAAAGGTTCATTTTAAAAGAACAACAATACCTCATTCAGTCCTCTCCCTTCTCAAGTCCTATAATTTTTCAAAATCCGATATCAAAAAAGTAGTAACCCGTGTTCCGGAACTCCTTGTAAGCAATCCAGACAAAACTTTAAAGCCCAAACTTGAATTTTTTGAAAAGATTGGTTTCTCAGGCCATGCATTGATATTCCTCATCACTTGCGTTCCCACTTTGCTCCAATTCAGCTTGGAGAACATGCTCCTTCCAAACCACAAAAAATTAAAAGCTGTTTTACGTACAGATGAAAATGTAATATCGGCCATAAAAAGTTCAAGTGCATTGCTTGTGTCAGATCTTGATAAAACTTTCTTACCCAAGGTTAAAATTCTTGAAGAGAATGGTGTTTCTGATGATGTTATACTTAAGTTGTTGACTAATTATAACAAGCAAGTGGTGCTGAAGCCTTATAGGTTTGATGAAATATTTGATTTTGTCAAAAAGATTGGGATTAGTCCAAAAAGTCCAATGTATGTCCATGCTTTTCGTGTGCTTGGTAGAATGAGAGGAAACGAATGGGAAATGAAAGTTGAAAATTTCAAGAAATTAGGGTGGACCGAAGAGGAGGTTCTGTTTGCATTCACAAAACATCCTTATTGTATGAGTGCATCAGTTGATAAAATCACAAAGAATTCGGAATTTTTCAAGGAGAAATTTGGTTGGGATTCAAATTTTGTTTCGAGAAATTCAGGTGTGCTTTCTTTTAGTTTTGAGAAAAGAGTTTTGCCGCGATACAAAATTTTAAATATATTAGAAAGCAAAGGGTTGCATAGTGGAAAAGTTGGAACTAACCATTTGAAGTTAAGTGAAAAGGATTTCTTGGTGAAATATGTTATGAAATATTACAAAGAAGTTTTGGAGGTGGTTGATGATGATATCAGGTGTAGATTGGAAGAATTAGGGTTGTTGAAGAGGAGTAACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250225.1	1.8e-75	uncharacterized protein LOC109827619
trEMBL	A0A1R3L6K0	1.3e-75	Mitochodrial transcription termination factor-related protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07900.1	33.83	2e-50	196		Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G05774	AT5G07900.1	334	219	2	28	359	69	402	33.83	2e-50	196
AfisC3G05774	AT1G21150.1	330	221	2	28	354	56	384	31.82	6e-40	161
AfisC3G05774	AT5G64950.1	349	234	6	13	351	26	369	28.65	9e-31	131

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	63	337	104.5	4.8e-30

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15032	MTERFD; mTERF domain-containing protein, mitochondrial	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network