result

Gene information

Detail information of AfisC3G05939

Location

Gene	Chr	Start	End	Strand
AfisC3G05939	chr3	1053149911	1053150495	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008778297.1	4.5e-49	transcription factor HEC2-like
Swissprot	Q9SND4.1	5.7e-41	bHLH transcription factor bHLH037
trEMBL	A0A6I9QXF4	1.5e-46	transcription factor HEC1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G50330.1	66.22	1e-38	156	HEC2	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

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Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	112	151	26.3	4.8e-06

Gene Ontology

Accession	Ontology	Name
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0001228	F	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0006366	P	transcription from RNA polymerase II promoter
GO:0005739	C	mitochondrion
GO:0005634	C	nucleus
GO:0046983	F	protein dimerization activity
GO:0009555	P	pollen development
GO:0009733	P	response to auxin
GO:0010500	P	transmitting tissue development
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0048462	P	carpel formation
GO:0048766	P	root hair initiation
GO:0048767	P	root hair elongation
GO:0080126	P	ovary septum development
GO:2000012	P	regulation of auxin polar transport

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network