Detail information of AfisC3G06028


Location
GeneChrStartEndStrand
AfisC3G06028chr310672661181067277655+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020261322.13.8e-132two-component response regulator-like APRR2 isoform X1
SwissprotQ6LA43.24.9e-84TOC2 protein
trEMBLA0A5P1F1L22.7e-132Two-component response regulator-like APRR2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G18020.143.783e-90 329APRR2;PRR2CheY-like two-component responsive regulator family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag114959.t1; g408431.t1
Allium fistulosumAfisC3G06028
Allium sativumAsa2G04995.1
Arabidopsis thalianaAT4G18020.1; AT4G18020.2; AT4G18020.3; AT4G18020.4; AT4G18020.5; AT4G18020.6
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00072.21Response_regDomain2012627.03.5e-06
PF00249.28Myb_DNA-bindingDomain26831729.36.2e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0007165Psignal transduction
GO:0006355Pregulation of transcription, DNA-templated
GO:0006996Porganelle organization
GO:0009735Presponse to cytokinin
GO:0009908Pflower development
GO:0042440Ppigment metabolic process
GO:0048522Ppositive regulation of cellular process
GO:0048580Pregulation of post-embryonic development
GO:0048831Pregulation of shoot system development
GO:0051093Pnegative regulation of developmental process
GO:0051241Pnegative regulation of multicellular organismal process
GO:0099402Pplant organ development
GO:2000241Pregulation of reproductive process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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