result

Gene information

Detail information of AfisC3G06267

Location

Gene	Chr	Start	End	Strand
AfisC3G06267	chr3	1115144680	1115146895	+

Sequences

CDS

Protein

Gene

>AfisC3G06267
AAGCATCGATCATATATACGAAGTAAAATGGAAAGATACGAATCAAAACTGGACTTACCAGGATTCAGGTTCCACCCAACAGAAGAAGAGCTACTCGACTTCTATCTCAAGCACAAAGTAAACAATAGGAATCACAGCTTCAACATCATAGGAACCATTAATCTCTACAGTTATGATCCATGTGAGCTTCCAGGTTTAGCAAAAATAGGAGAAAGGGAATGGTACTTTTTTGTGCCAAGAGACAGGAGACAGTCTAGCGGAGGAAGGCCAAACAGAACAACCAAACGCGGGTTCTGGAAAGCTACAGGGTCTGATAGGCCTGTTCGTAGTGCCGCAGATCCTAAACGGGTTATCGGGTTGAAGAAGACCTTGGTCTATTATACGGGCAGGGCACCACGTGGATCCAAGACTGATTGGGTCATGAACGAATATCGCCTTCCTGGTTCTTCCAATTCCTCAGTTCCTCCTCCACATGTAAGAACAAATTTCATGCAGTAATGTCTTACTAAAGTATAATGTATGGTAGTGTATGCACGATGAAACTGATATATGATAAATGATGTGCAGGAGGACATAGTATTGTGCAAAATATATAAGAAGGCAACACCATTAAAAGAGCTTGAGCACCGTGCAGCTATAGCAGAGGCAAGAAGTAGAATAAATAACAACATGTTATCAGCAGAAAATGCATCATCAAGCAGTCAGATTGATTACAAGTTTGATACAGAGAATAGTTCAAATGATGCAGATGATATTGAACTATTGATGAATCAAGATGGAGCATCTGGGAATGAGATTGAGATATTTGCTCCACCGAGCTCAGCAGTTGTTCAGCCGGTGAATGTACCAGAGCTTCAGATTCCGAATAATGGATTTGATTATTGGATGCAAGATGTAACTCTATGGTCTCCATATGCTAACCTTCTTAACTTCTAACTAGGCCACTTTGAATTCTGTACATTGTTGACAACCGTTATATACAGTCTGTTATTTGCAAGAACACGAAAATGAAAACTGATTAAATGTAACAGAAGCTAATCTCATAAAACAAACTTAAATGCATGTACTATTCATACATTAATGAATTAATTGCGTTTCAACTCAGAGTGTAGGGGGATTGGAAGCGGTAAGGCTTTCTGTGCCTAAGTAGGCAGTTCAAAGATTAACTATGAATGGAACTTGGGCAAATAATTGATAGATGGAACAGAACATACAAATCAATTGTATTCAATTTTAACAGCTTTCACATAAATTAGAAGCCACTGTTACATGATTTCCAAATCAATGTATACATAATTTAACCGTCAACATGAAAAGCGTGGATCCTGATCTTTTTCTTCAATGCCAGGAATAGGGTTGTTATAACTTAATTCAGGTGATCTTGGAACTTCAAATCCCACACCACAGTCACCACTGCTTCCTGCAAAATTGATTCCACATCTAAGAACATAGGTTGTAAGTTACTATTATGTAAGTTTCATATCTAAGAACATATGATTTTTCATCACAAATGTTGAAATCTCATGGGTGAGATTCATGGTACTGAAATGTGCAAGTTACTCTGTTTTGGAGGCAATTTCTCTTAAGACTGAATATGCAGTGCAGCAAAATATGCATAACAGCATAAACACTAAATTGCCTTCTAAACTATGAAAAAGCAACACATTAAAGCTATTTCATGATGTTGTATAAGATAATCTCAGTTTTTTGCATCACAAAGTAATCCAGGTAACCAGATCAATCAGTTATATAATCATAAAATGAATTAACTTGGCTTACGGGATCATCACTACTTGGACCATTCACGATGCAGGCCCAAATAAAGGTGTTCAAATGGGGACAGGAATGGAGAAAAAAGTGATCAAATGGCTGCAGCCTGGCTCGGATTTGTAAATAATGATTATGTATTACAAGCAGTGATGAAACCAGAAATTTCATTTGTGTGATTGGGCAAAGTCCGATTAAAAAAAAACGGAAGAAGAAGAAGAAGCAAGCTTGCATACACATAAACTAAATCCCATCGATATAGACAATTGAGGCAAACTCGCGATATATATTGCCAAAGCAAGCAAATAGAGTGGGATGGAGGAGAGAACTATAGTTGACGGAATCAAAATGAATTTTTAATGGTTATGTTGATTTTGATATGTTTGTTACTTGTTTATTTGGGTTTTAAAACCTATATTTTTGTAGAATGGATACTTTAACTTTATAAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010918221.2	3.6e-81	NAC domain-containing protein 22
Swissprot	Q10S65.1	1.0e-72	NAC domain-containing protein 22
trEMBL	A0A6I9R5T1	2.6e-81	NAC domain-containing protein 22

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G17040.1	49.64	4e-67	251	anac036;NAC036	NAC domain containing protein 36

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G06267	AT2G17040.1	276	105	9	8	260	5	269	49.64	4e-67	251
AfisC3G06267	AT2G02450.2	151	64	2	10	160	52	198	54.97	3e-48	188
AfisC3G06267	AT2G02450.1	151	64	2	10	160	52	198	54.97	5e-48	187

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	11	137	92.2	2.4e-26

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005992	P	trehalose biosynthetic process
GO:0006561	P	proline biosynthetic process
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009644	P	response to high light intensity
GO:0009718	P	anthocyanin-containing compound biosynthetic process
GO:0009723	P	response to ethylene
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0009962	P	regulation of flavonoid biosynthetic process
GO:0010029	P	regulation of seed germination
GO:0010120	P	camalexin biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0042538	P	hyperosmotic salinity response
GO:0042542	P	response to hydrogen peroxide
GO:0042803	F	protein homodimerization activity
GO:0043068	P	positive regulation of programmed cell death
GO:0043565	F	sequence-specific DNA binding
GO:0045770	P	positive regulation of asymmetric cell division
GO:0045995	P	regulation of embryonic development
GO:0046982	F	protein heterodimerization activity
GO:0048103	P	somatic stem cell division
GO:0048317	P	seed morphogenesis
GO:0048527	P	lateral root development
GO:0048829	P	root cap development
GO:0051091	P	positive regulation of sequence-specific DNA binding transcription factor activity
GO:0080060	P	integument development
GO:0090400	P	stress-induced premature senescence
GO:1900056	P	negative regulation of leaf senescence
GO:1900057	P	positive regulation of leaf senescence
GO:1902074	P	response to salt
GO:1904250	P	positive regulation of age-related resistance

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network