result

Gene information

Detail information of AfisC3G06286

Location

Gene	Chr	Start	End	Strand
AfisC3G06286	chr3	1117488665	1117491095	+

Sequences

CDS

>AfisC3G06286
ATGGAGAGTCTCCGAGGAGTCATTAATTCTTATTTCTATAGGGAGGAAATGGAGTTGTCTTTTCTGCAAATGCTCAATGGCACAATTACTCCCTACCAAGAAGAAACAGACATGGTACAAGAAGATAAACAACAGCTGGAAGAACAAATTCTCCAGCATTTGCAGCAAGAATATAACTTGTGCGCTCATTTGAAAATGCAAGAATGCTATAACAACACCATGAGAAGTAGCAGTTCAACAGCTGTTAATGAGCAGCTAGATAGCTGCATTACTCTAAAGGATACAAATACAGTTAATGTCTGCCCTACCAAGACAAGGAAGAAGCGTAAAAGGGCACGTGTTCCTCAGCCTACTACAGCCAAGAACCCTGAAGAAATGGAAAGTCAAAGGATGAACCACATTGCAGTGGAGAGAAATAGAAGGAAATTGGTCAACAGTCATCTAAATGCACTTCGTTCCATTATGCCTTCATCATTTGTTCAACGTAATGATCAAGCATCCATAGTAGCAGGAGCCATAGACTTCATCAAAGAACTCGAACAACATCTCCAGTTTCTCAAGGCCAAGAAAAGGCATCGAGCAAACAAAGAAGAAAACATGGCATCATGTACAGCATCATCTTCTTGCACAAACAATGAGGAAGCTATTCAAGCGACTGCGAAGACAATGACAGATTTCTTTATTTCACCACAATACATGTCCTACACAGAAAGTAAATGTGGGGTTGATGTGGAAGCTACAGTAGTTCAAGGTCATGTTAATCTGAAAATTGTAGGTAAAAGGAATAGAGGGCAAATGGTTAGGGCAATTTCTGCATTCGAGCAGATTGGGCTTACTGTCATGCATCTTAATATTAACACTTTGGACGCTTCTTCCATCCTTTACTCGCTAAATCTCAAGATAGAAGAAGAGAGCAAGATGCGGTCAGCAGATGAGATAGCAAGTGTGGTGCATCAGATATTCAGCTACATCATCAGCACATGCTGCGATTGA

Protein

Gene

>AfisC3G06286
GTATAAGCCAAGCACGTGGCCAGATCAAAAGATATACTGTTTAGCCAAGTTTGTTCAAATCTAGCCTTTAACCTGTAATCCGATAAGCTATAAACCCTTGAATATATCCTCCTTCGCATGGCAGCATTCCTATTTATATACACTCTGCAAACCATTAATTCTCTCCATTTTATTTTCTAAAATTACTTACAGAGAACTACAACAATAGTTGCTATTGAGAACTAAAGGCTGCAATCAATGAGCTACATTTGACCTCTGCTTCCATTTATTGCTCTGAGTTAGTTCGAGAGAGAATTTGAAAGAGTAGTTTTTAAAGCAAAAAGTGGTCGCAGAATATTTCTGCTGTCCATCAAATTTATTGATGGAGAGTCTCCGAGGAGTCATTAATTCTTATGTATGCCTTTACATTCCCAACTTTTTGATTTTCCCCCCCCCCCATTTTCTATTCTAAGCCTCTGCACTGTGCCAGTTTTAAATTTTTCTACAAATTTGAACTGGTACTTTTGTTTCGTGGCTCTTGGGTTATTTCGTTTGCAAATTCAGTTGTAAAAATCTCATAGTTTTGCTTAAATTTCAGTTCTATAGGGAGGAAATGGAGTTGTCTTTTCTGCAAATGCTCAATGGCACAATTACTCCCTACCAAGAAGAAACAGACATGGTACAAGAAGATAAACAACAGCTGGAAGAACAAATTCTCCAGCATTTGCAGCAAGAATATAACTTGTGCGCTCATTTGAAAATGCAAGAATGCTATAACAACACCATGAGAAGTAGCAGTTCAACAGCTGTTAATGAGCAGCTAGATAGCTGCATTACTCTAAAGGATACAAATACAGTTAATGTCTGCCCTACCAAGACAAGGAAGAAGCGTAAAAGGGCACGTGTTCCTCAGCCTACTACAGCCAAGAACCCTGAAGAAATGGAAAGTCAAAGGATGAACCACATTGCAGTGGAGAGAAATAGAAGGAAATTGGTCAACAGTCATCTAAATGCACTTCGTTCCATTATGCCTTCATCATTTGTTCAACGTGTATGTTTCTTAATTTTTAAATATTGCATTTTCACTGTCCATAAACTCCTGAACAAACCAAATAGCATATAGACTGTAGACCATTTTATTGATATTAAATCGAAAGTTGTACTTTTTTTTTGTTTGTTTATTTTTTCTTTTGTACTAAAAGATCTTTCAAACGCAGAATGATCAAGCATCCATAGTAGCAGGAGCCATAGACTTCATCAAAGAACTCGAACAACATCTCCAGTTTCTCAAGGCCAAGAAAAGGCATCGAGCAAACAAAGAAGAAAACATGGCATCATGTACAGCATCATCTTCTTGCACAAACAATGAGGAAGCTATTCAAGCGACTGCGAAGACAATGACAGATTTCTTTATTTCACCACAATACATGTCCTACACAGAAAGTAAATGTGGGGTTGATGTGGAAGCTACAGTAGTTCAAGGTCATGTTAATCTGAAAATTGTAGGTAAAAGGAATAGAGGGCAAATGGTTAGGGCAATTTCTGCATTCGAGCAGATTGGGCTTACTGTCATGCATCTTAATATTAACACTTTGGACGCTTCTTCCATCCTTTACTCGCTAAATCTCAAGGTATGTTATTTCTCACTTTAATCCTTTTCCTGTTTGATTTGAAATATAATATTAAATGAATTACATATACAATGTATATGACTCATGATCCACAAACTGGAGTTGGATTTTTGATGGTTCTTGAGTTTGGATTTAAACATATATAGCAATATTGCAAGTAGTTTGTTTCTAACTTGTAGTTTTTAAACATGTCATAATCTTATAAGGTGATTTTATTTATACATGCAAAAGTACATATATAAATTCATGAAGAATCTTTTTCCATAAGTAAACTGTTTGCAGTGATATACTGAAATACTAAAAGAAAGCCACTTGTTATTAAATATTAGCTCATAACCATTCAATAAAGCCCATGCTGTATGTAAAATAAAAATAAAAATGGTGATATATGAATATGAATGAACAGATAGAAGAAGAGAGCAAGATGCGGTCAGCAGATGAGATAGCAAGTGTGGTGCATCAGATATTCAGCTACATCATCAGCACATGCTGCGATTGATATATCATTGTTTGCTTGTATCAATCAAAGTATTAGGTGGTCCTCTTTATCTTTCTCTTTCTGTACTCCGCTGCATCCTTACCAGCAATCAATTATTTGCAGACCTGCACCCTCTTTTTTATTAAACTGTAACTTTCGTAGCAGAATCAGAATTTGGATTTTCCTTTTCCTCTTCTTTTTTACCTTTTATTTTTCCTTTGTTCGAAGTAATATTACTTTCTTATTTTTGTTTGTTACCTTTTAGTTTTAGAGGTTGTTGTTTAGCTTGGCTATGTTTTTTCGTTATTTTTTTTTGCAATTTGTGTTCTTGTATATGCTTTTG

Functional annotation

Database	accession number	e-value	annotation
nr	QDF82401.1	4.8e-51	transcription factor bHLH57-like isoform X1
Swissprot	Q700E4.1	2.9e-37	bHLH transcription factor bHLH067
trEMBL	A0A4Y6JKQ8	3.5e-51	Transcription factor bHLH57-like isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G46810.1	47.26	9e-44	174		basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G06286	AT2G46810.1	201	90	3	122	321	184	369	47.26	9e-44	174
AfisC3G06286	AT4G01460.1	207	100	3	121	324	105	303	46.38	3e-43	172
AfisC3G06286	AT3G24140.1	240	121	6	93	324	164	396	43.33	1e-41	167

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	129	180	43.7	1.8e-11

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0009913	P	epidermal cell differentiation
GO:0010377	P	guard cell fate commitment
GO:0010444	P	guard mother cell differentiation
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045597	P	positive regulation of cell differentiation
GO:0051782	P	negative regulation of cell division
GO:0061086	P	negative regulation of histone H3-K27 methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network