result

Gene information

Detail information of AfisC3G06510

Location

Gene	Chr	Start	End	Strand
AfisC3G06510	chr3	1161067138	1161068259	+

Sequences

CDS

>AfisC3G06510
ATGATGCGAAATCATCTGAATTCTTCCTTATTCAAAAATTTCACAAAAGTGTATTGCTCGGTTTCAACATCATCAGAACCATCAGCGTCTCTAGTTTTCCATTTCTTGAAAAATTCATGTGCTCTTTCTCAAGAATCAGCACTTACCATTTCCAAACAGATCCATTTCAAGACAACGAAAACACCTCATGAAGTCCTTTCCCTTCTCAAGTCGTACCATCTCTCCAAACTCGATATAATGAAAGTAGTGACCCGTCGTCCAAAGCTACTTTTAAGCAATGCTAACAAAACTGTAAAACCCAAGTTTGAGTTTTTAGAATATATTGGCTTTTCGGGTCCTGCGTTGATCCACCTCATCAGCTCTGAACCCAAATTGCTACGATCCAGCTTACAGAAGAGGCTCCTTCCAAACTACCAAATACTGAAAGGCGTTTTATCGACAGATGTAAATGTGAGGTCTGCAATTACAAGCTTTCCTTCATTGCTTGAGATTGATCTTGACAAGGCACTGAAGCCCAAGATAAAGGTTCTGGAAGAGAAGGGTGTTTCCACTGACGTTATGATTAAATTGTTGACCAAATACAGCAAGTATTTGATGGTGAGGGACAAGAGGATGGATGAGATATTTGATATTGTTAAAAGGGCAGGGATCAGTCCTAAAAATGCTATGTATGCGTATGCATTTGGGGTGCTTGGTGGAATGAAAGGCGACGTCTGGAAAGCGAAAGTCGAAAATTTCAAGAAATTAGGATGGACAGAGGAGGAAGTCATGGCTGCATTCAGAAAGCATCCTCATTGTATAGCCCTCTCAACTGATAAGATCATGAAGAACTTTGTGTTTTATAAAGAGAAGTTTGGTTGGAGTTCGGACTACGTATCCAGGAATTCGATTATCCTTTCCTTTAGTTTCGAGAAGAGAATCCTGCCGCGGTATGGAATTTTAAGCATGTTGGAGAGTGAAGGACTTTATAGAGGAAATGTTGTTGCAGGGCAATTGATGTTGGGAGAGAAGGAATTCTTGTTGAAATATGTGATGAAAAATTATAAACAAGTTCCGAATCTGATTGATGATAACATCAGAAGTAGATTGGAAGATCTAGGGCTCATTGACAAAAACTAA

Protein

Gene

>AfisC3G06510
ATAATGATGCGAAATCATCTGAATTCTTCCTTATTCAAAAATTTCACAAAAGTGTATTGCTCGGTTTCAACATCATCAGAACCATCAGCGTCTCTAGTTTTCCATTTCTTGAAAAATTCATGTGCTCTTTCTCAAGAATCAGCACTTACCATTTCCAAACAGATCCATTTCAAGACAACGAAAACACCTCATGAAGTCCTTTCCCTTCTCAAGTCGTACCATCTCTCCAAACTCGATATAATGAAAGTAGTGACCCGTCGTCCAAAGCTACTTTTAAGCAATGCTAACAAAACTGTAAAACCCAAGTTTGAGTTTTTAGAATATATTGGCTTTTCGGGTCCTGCGTTGATCCACCTCATCAGCTCTGAACCCAAATTGCTACGATCCAGCTTACAGAAGAGGCTCCTTCCAAACTACCAAATACTGAAAGGCGTTTTATCGACAGATGTAAATGTGAGGTCTGCAATTACAAGCTTTCCTTCATTGCTTGAGATTGATCTTGACAAGGCACTGAAGCCCAAGATAAAGGTTCTGGAAGAGAAGGGTGTTTCCACTGACGTTATGATTAAATTGTTGACCAAATACAGCAAGTATTTGATGGTGAGGGACAAGAGGATGGATGAGATATTTGATATTGTTAAAAGGGCAGGGATCAGTCCTAAAAATGCTATGTATGCGTATGCATTTGGGGTGCTTGGTGGAATGAAAGGCGACGTCTGGAAAGCGAAAGTCGAAAATTTCAAGAAATTAGGATGGACAGAGGAGGAAGTCATGGCTGCATTCAGAAAGCATCCTCATTGTATAGCCCTCTCAACTGATAAGATCATGAAGAACTTTGTGTTTTATAAAGAGAAGTTTGGTTGGAGTTCGGACTACGTATCCAGGAATTCGATTATCCTTTCCTTTAGTTTCGAGAAGAGAATCCTGCCGCGGTATGGAATTTTAAGCATGTTGGAGAGTGAAGGACTTTATAGAGGAAATGTTGTTGCAGGGCAATTGATGTTGGGAGAGAAGGAATTCTTGTTGAAATATGTGATGAAAAATTATAAACAAGTTCCGAATCTGATTGATGATAACATCAGAAGTAGATTGGAAGATCTAGGGCTCATTGACAAAAACTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010943661.1	2.1e-55	uncharacterized protein LOC105061347
trEMBL	A0A1R3L6K0	2.4e-53	Mitochodrial transcription termination factor-related protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07900.1	31.52	7e-47	184		Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G06510	AT5G07900.1	330	222	3	30	356	69	397	31.52	7e-47	184
AfisC3G06510	AT1G21150.1	329	227	3	30	355	56	383	29.79	1e-38	157
AfisC3G06510	AT5G64950.1	337	239	4	18	346	27	362	26.41	3e-27	119

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	64	143	35.7	4.2e-09
PF02536.11	mTERF	Family	147	221	34.1	1.3e-08
PF02536.11	mTERF	Family	240	322	42.1	4.8e-11

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15032	MTERFD; mTERF domain-containing protein, mitochondrial	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network