result

Gene information

Detail information of AfisC3G06522

Location

Gene	Chr	Start	End	Strand
AfisC3G06522	chr3	1163758365	1163760067	+

Sequences

CDS

>AfisC3G06522
ATGATTCGCCTTCTTCAAAACTCTCCATTATTCAAAAGCATCGCAAAAGCAAATTACTCAGTTTCAGCGGACCCATCTGCATCGTTAACTCTTCATTTCCTGAAAAATTCATGTGGTCTTTCTCAGGAATCCGCTTTCTCCATCTCTGAAAAAGTCCATCTGAAAACAACCAAAGCACCTCATGCAGTCCTTTCTCTTCTCAAGTCATACCATTTTTCAGGACCCGATATCACAAAAGTCATTACCCGTTTTCCAAAGATCCTCCTAAGTAACGCAGACAAAACCATGAAGCCCAAATTCGATTTTCTGAGCAGCATCGGATTTTCAGGTCCTGCATTAGTCCAACTTATCACTACAGTTCCCACATTGCTCCATTTCAGCCTAGAAAACAAGCTCCTTCCAAACTATAACATCTTAAAGCAACTTCTACACACAGATGAAAAAGTGACTGCGGTGATTAAAAGCTCCAGTGCATTGCTTGTTTCTGATCTTGATAAGATATTTATGCCCAAGATTAAGATGCTAGAAGAGAATGGTGTTTCGGTCGATGTTATACTTAGGTTATTGACCATGTATAGCAATCATTTGATGGTGAGGCCTGATAAGTTTGATGAAATATTTGAACTTGTTAAGAAGATGGGGATTAGCCCGAAATGTGCAAGGTATGCAGATGCCTTTGGCGTTCTTGGTAGAATGGTGGAAAATGAATGGGAAACAAAACTTGAAAATTTTAAGAAATTGGGTTGGAGCGAAGAAGAAGTTATGTTTGCATTTGCTAGACATCCTTTTATTATGAAAGCATCAGCTGAAAAGATTGTGAAGAATTTTGAGTTTTACAAGGAGAAGTTTGGTTGGGATTCACACTATGTATCAAGAAATCCGGCATTGCTTTCGCTCAGTTTTGAAAAAAGGGTAATGCTACGGTATAGAGTTTTAAGCATTTTAGAAAGTAAAGGGCTGTTCAATGGAAAATTTGGAGCAACACAGTTGCAGATAGGGGAAAAGAGTTTTCTGAAGAAGTATGTGATGGTGCATTATAAACAAGTTCAGGAGCTGATTGATGATGATATCAGGCGTAGATTGGAGGATTTAGAGTTGTTGCAGGATACCTAG

Protein

Gene

>AfisC3G06522
GCTTATTACATGTCCATCCATCTGAATTGGCCTCGGCCTGCGTGATTATGTGTAATCACTACCCTTGAGGCACCCAACTTCCCTCTCTACTGAATATTCAGCCATAATTGCTCAGCCTTAATTCCCCACACCGTGTCGGTGATGCTCTAAATCAAATTATGAACAGTTACGCATCAACATGCTGGAGCAGAAGTTTGTATTTATTACAGTTATTTTGGCTCCTTTGAATCTTTTTCGCAGACCTGCCATTTTTGGGATCGGGATAACTTTTGTACAGGCCACGAATTTCATTCTCTAAATATCATCTGAATGGATAAATTTATATCTACGTCGCCAAATCTGTCTTCATCGGACTTCTAGACAGCCTTGCTCCATTTCTTCCAGTACCACCCTCGAAATTAAGAAAATTAAAATTGCATACAAGTCGTTCGCTGAAAAGCCCTAACAAAATCCCTTGATATGATTCGCCTTCTTCAAAACTCTCCATTATTCAAAAGCATCGCAAAAGCAAATTACTCAGTTTCAGCGGACCCATCTGCATCGTTAACTCTTCATTTCCTGAAAAATTCATGTGGTCTTTCTCAGGAATCCGCTTTCTCCATCTCTGAAAAAGTCCATCTGAAAACAACCAAAGCACCTCATGCAGTCCTTTCTCTTCTCAAGTCATACCATTTTTCAGGACCCGATATCACAAAAGTCATTACCCGTTTTCCAAAGATCCTCCTAAGTAACGCAGACAAAACCATGAAGCCCAAATTCGATTTTCTGAGCAGCATCGGATTTTCAGGTCCTGCATTAGTCCAACTTATCACTACAGTTCCCACATTGCTCCATTTCAGCCTAGAAAACAAGCTCCTTCCAAACTATAACATCTTAAAGCAACTTCTACACACAGATGAAAAAGTGACTGCGGTGATTAAAAGCTCCAGTGCATTGCTTGTTTCTGATCTTGATAAGATATTTATGCCCAAGATTAAGATGCTAGAAGAGAATGGTGTTTCGGTCGATGTTATACTTAGGTTATTGACCATGTATAGCAATCATTTGATGGTGAGGCCTGATAAGTTTGATGAAATATTTGAACTTGTTAAGAAGATGGGGATTAGCCCGAAATGTGCAAGGTATGCAGATGCCTTTGGCGTTCTTGGTAGAATGGTGGAAAATGAATGGGAAACAAAACTTGAAAATTTTAAGAAATTGGGTTGGAGCGAAGAAGAAGTTATGTTTGCATTTGCTAGACATCCTTTTATTATGAAAGCATCAGCTGAAAAGATTGTGAAGAATTTTGAGTTTTACAAGGAGAAGTTTGGTTGGGATTCACACTATGTATCAAGAAATCCGGCATTGCTTTCGCTCAGTTTTGAAAAAAGGGTAATGCTACGGTATAGAGTTTTAAGCATTTTAGAAAGTAAAGGGCTGTTCAATGGAAAATTTGGAGCAACACAGTTGCAGATAGGGGAAAAGAGTTTTCTGAAGAAGTATGTGATGGTGCATTATAAACAAGTTCAGGAGCTGATTGATGATGATATCAGGCGTAGATTGGAGGATTTAGAGTTGTTGCAGGATACCTAGGATTTCGATGTGAGTAGTATGCTTTACACTTATTATGATATATGTTTATGCTCACTTGGTGATTTTTCCATGATTTCATAATTTATGGAGTTCAACTGTATTGTTGGAAGTTTCTTCCATTTATATGTCAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010943661.1	2.3e-54	uncharacterized protein LOC105061347
trEMBL	A0A6I9SIF7	1.7e-54	uncharacterized protein LOC105061347

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07900.1	33.13	3e-50	196		Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G06522	AT5G07900.1	329	218	2	28	354	69	397	33.13	3e-50	196
AfisC3G06522	AT1G21150.1	328	221	1	28	353	56	383	32.01	7e-41	164
AfisC3G06522	AT5G64950.1	352	240	6	12	351	20	369	27.84	4e-30	129

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	53	313	112.9	1.3e-32

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15032	MTERFD; mTERF domain-containing protein, mitochondrial	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network