Detail information of AfisC3G06671


Location
GeneChrStartEndStrand
AfisC3G06671chr311927363991192737233+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRRT60521.17.2e-26hypothetical protein B296_00012994
SwissprotQ8S9H7.11.2e-20Transcription factor DIVARICATA
trEMBLA0A426Z9875.2e-26HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G58900.135.297e-23 103Homeodomain-like transcriptional regulator

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag64837.t1
Allium fistulosumAfisC3G06671
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain13517942.45.3e-11

Gene Ontology
AccessionOntologyName
GO:0000122Pnegative regulation of transcription from RNA polymerase II promoter
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0008270Fzinc ion binding
GO:0009536Cplastid
GO:0009651Presponse to salt stress
GO:0009723Presponse to ethylene
GO:0009737Presponse to abscisic acid
GO:0009739Presponse to gibberellin
GO:0009751Presponse to salicylic acid
GO:0009753Presponse to jasmonic acid
GO:0046686Presponse to cadmium ion
GO:0030307Ppositive regulation of cell growth
GO:0048366Pleaf development
GO:2000469Pnegative regulation of peroxidase activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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