Detail information of AfisC3G06842


Location
GeneChrStartEndStrand
AfisC3G06842chr312209293121220932184-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020275080.15.0e-61LOB domain-containing protein 15-like
SwissprotQ8L5T5.23.6e-56ASYMMETRIC LEAVES 2-like protein 11
trEMBLA0A5P1EEI33.6e-61LOB domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G30340.176.421e-55 212LBD13LOB domain-containing protein 13

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag441966.t1
Allium fistulosumAfisC3G06842
Allium sativumAsa2G05613.1; Asa2G05618.1
Arabidopsis thalianaAT2G40470.1
Oryza sativaLOC_Os01g60960.1; LOC_Os05g07270.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03195.11DUF260Family19115139.72.9e-41

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0016020Cmembrane
GO:0005739Cmitochondrion
GO:0005654Cnucleoplasm
GO:0009536Cplastid
GO:0009799Pspecification of symmetry
GO:0009944Ppolarity specification of adaxial/abaxial axis
GO:0009954Pproximal/distal pattern formation
GO:0009965Pleaf morphogenesis
GO:0010199Porgan boundary specification between lateral organs and the meristem
GO:0010311Plateral root formation
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0048441Ppetal development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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