result

Gene information

Detail information of AfisC3G07098

Location

Gene	Chr	Start	End	Strand
AfisC3G07098	chr3	1270694771	1270696921	+

Sequences

CDS

>AfisC3G07098
ATGGATACTTCATTCTTTGGTTTTCTTAATGGTAGTGAAGATGATTATAACATGTGCAGCAACTATGATACCCGTAATGGAATTCCAAAATTTAAAACTATCACCCCTCCATCTCTTCCTATATCAACTTCCTTATCATCTTATTTTGCTACTTTATCTGACCTCAGCCCCACCGAGCTTTTACAATCCCCTATTCTTCTTACTTCCTTCAATAATGGCCTTCCATCTCCGACCACAGGAGCAATTCCATATCGATCTTACGATCCAAAGCCAAATCCTACAAATAACACAAACCCTCAACAAAGCATCAAAGAAGAAGAAAATATGACATTCAACGACTTTTCGTTCCAAATAACACATAGAAACAATACATATGAGCAGAGCAATGACTTATATTATGAGGCAGAAACAACCAATATTCCTCAAATATTGAAAGAGCAAAAGGGTGCAAATGATGGATACAACTGGAGAAAATATGGACAGAAAGCAGTGAAAGGAAGCGAAAATCCAAGGAGCTATTACAAGTGCACTTTTCCAAAGTGCCCAATGAGGAAGAAAGTAGAGAGAAGTGCGGATGGTCAAATAACTGAAATCATATATCGTGGAACTCATACTCATCCAAAGCCTCAACCTTCTAGAAGAAATTCAGGCATCTCTCATTTGATTATGAATAACCAAGCTCAACTTGAAGCATCTGAAAGTTCCTTTAGTGCACTATCTGGCACACCTGAAAACTCTTCTGTATCATTTGCTGATGATGACGGTGATGTTGATGCAAGTTCTAAGAGGAGCAATTTGGGTGTAGATAGTATTGATGAAGGTGAACATAATGCTAAGAGAATAAAGAAAGAAGGCGATAATGAGAGAATAAATATAAACGGGACTCGAACAGTAAGAGAGCCTAAAGTGGTGGTTCAAACAACAAGTGATATCGATATACTTGACGATGGATATAGATGGAGGAAATATGGACAAAAAGTTGTGAAAGGAAACCCTAATCCAAGGAGCTACTACAAATGCACAAGTGCTGGCTGTGCTGTGCGGAAGCATGTAGAAAGAGCTTCGCATGATATAAGGGCTGTGATAACAACTTATGAAGGCAAACATAACCACGATGTGCCACAAGGTCGAGGCAGTGGTGCGGCAAATAGATCATCAACAATTAACAACAGTGCTATTATAAGACCTTCTGTCATTTCTAAACACCAGGATAATCAAGCTCCTTTTACATTGGAAATGCTTCAAGCTCCTGATAGTTATAGCCATGGTTCTATATATTCTGGATATGGAAACTCAAATTATAACATGTATTCTAGAACCGGTAATGAACCAATAGGGGACTCTTTTGTGGATTCGTTGCTGCTTTGA

Protein

Gene

>AfisC3G07098
CTTTGCTCTATAATAACCTACCTATATATGCACAAACAAACATTACTATCCTATATGTAATTCTCCCTTACTTTTCTCTAATGGATACTTCATTCTTTGGTTTTCTTAATGGTAGTGAAGATGATTATAACATGTGCAGCAACTATGATACCCGTAATGGAATTCCAAAATTTAAAACTATCACCCCTCCATCTCTTCCTATATCAACTTCCTTATCATCTTATTTTGCTACTTTATCTGACCTCAGCCCCACCGAGCTTTTACAATCCCCTATTCTTCTTACTTCCTTCAATAATGTAAGTAACTCAGTTTTTTTAATCATATTTTGATTCTAACCATTTGATGACTAATTAATTAAACTTAATTATATGGGTATTGTTCGTGTATGTTATGAATAGAAATTAATACACATGTAAAGATTATGTTTGAATGGTTGCTAGTTTCATAATCATCCTATCTACATCTTTAGAAGGAAAAGGAAAAATAGCTTACTTGGTTTCTATATGTTAAACAGGGCCTTCCATCTCCGACCACAGGAGCAATTCCATATCGATCTTACGATCCAAAGCCAAATCCTACAAATAACACAAACCCTCAACAAAGCATCAAAGAAGAAGAAAATATGACATTCAACGACTTTTCGTTCCAAATAACACATAGAAACAATACATATGAGCAGAGCAATGACTTATATTATGAGGCAGAAACAACCAATATTCCTCAAATATTGAAAGAGCAAAAGGGTGCAAATGATGGATACAACTGGAGAAAATATGGACAGAAAGCAGTGAAAGGAAGCGAAAATCCAAGGAGCTATTACAAGTGCACTTTTCCAAAGTGCCCAATGAGGAAGAAAGTAGAGAGAAGTGCGGATGGTCAAATAACTGAAATCATATATCGTGGAACTCATACTCATCCAAAGCCTCAACCTTCTAGAAGAAATTCAGGCATCTCTCATTTGATTATGAATAACCAAGCTCAACTTGAAGCATCTGAAAGTTCCTTTAGTGCACTATCTGGCACACCTGAAAACTCTTCTGTATCATTTGCTGATGATGACGGTGATGTTGATGCAAGTTCTAAGAGGAGCAATTTGGGTGTAGATAGTATTGATGAAGGTGAACATAATGCTAAGAGAATGTAAGTGTTCAAGCAATCCAATATTTTTTTTTACAAATGGTAGGGTTATATTTGTTATCAAAATATAGAATGCATCTAAATATTGTTTGTTATGATTAATTCAGAAAGAAAGAAGGCGATAATGAGAGAATAAATATAAACGGGACTCGAACAGTAAGAGAGCCTAAAGTGGTGGTTCAAACAACAAGTGATATCGATATACTTGACGATGGATATAGATGGAGGAAATATGGACAAAAAGTTGTGAAAGGAAACCCTAATCCAAGGTTAGGAGCTCACCGAAGTTTTCCTATAGAATTTACAAACGTAATACAATAGTTTTGTGCAATCTAACCAAGTTTCTTCAACAATTAGATACTGACAAGATTTAATATTTCTTGATTTCTCAGGAGCTACTACAAATGCACAAGTGCTGGCTGTGCTGTGCGGAAGCATGTAGAAAGAGCTTCGCATGATATAAGGGCTGTGATAACAACTTATGAAGGCAAACATAACCACGATGTGCCACAAGGTCGAGGCAGTGGTGCGGCAAATAGATCATCAACAATTAACAACAGTGCTATTATAAGACCTTCTGTCATTTCTAAACACCAGGATAATCAAGCTCCTTTTACATTGGAAATGCTTCAAGCTCCTGATAGTTATAGCCATGGTTCTATATATTCTGGATATGGAAACTCAAATTATAACATGTATTCTAGAACCGGTAATGAACCAATAGGGGACTCTTTTGTGGATTCGTTGCTGCTTTGATTCCCTTCTGGGTTAGATGTACTGGTATAGAGTATAGTTTTGTGCATATTTATACTTGTTGAAGATATTGTTTTATTTTTTGTAGTCCTTTTTACAGTGAAAGATAAACAAAACACATCTCTGTAATCTGTATACTTTTGTAAAACTACATTATATACAAAGATATAATAGTATTTGTATTACGAATGTTGTGATTACATTCAATCCAACGTCATCAGTGTCTTTAAAAGATTAATTCAAGCTCATGGTATGAAGAAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008809977.1	4.4e-111	WRKY transcription factor WRKY24-like
Swissprot	Q6B6R4.1	1.5e-95	WRKY transcription factor WRKY24
trEMBL	A0A7S8F9L2	1.6e-123	Abiotic stress-related transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38470.1	45.80	6e-86	314	ATWRKY33;WRKY33	WRKY DNA-binding protein 33

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G07098	AT2G38470.1	441	171	8	28	414	40	466	45.80	6e-86	314
AfisC3G07098	AT4G26640.2	254	83	5	141	379	206	445	55.91	2e-72	270
AfisC3G07098	AT4G26640.2	71	33	1	140	209	370	440	52.11	1e-14	77.8

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	151	207	89.2	1.5e-25
PF03106.12	WRKY	Domain	315	372	88.1	3.3e-25

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001101	P	response to acid chemical
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0007165	P	signal transduction
GO:0005634	C	nucleus
GO:0030010	P	establishment of cell polarity
GO:0009409	P	response to cold
GO:0009555	P	pollen development
GO:0009651	P	response to salt stress
GO:0009941	C	chloroplast envelope
GO:0009942	P	longitudinal axis specification
GO:0010033	P	response to organic substance
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0043167	F	ion binding
GO:0070370	P	cellular heat acclimation
GO:1901700	P	response to oxygen-containing compound
GO:1990837	F	sequence-specific double-stranded DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13424	WRKY33; WRKY transcription factor 33	EC:-	MAPK signaling pathway - plant	ko04016
K13424	WRKY33; WRKY transcription factor 33	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network