Detail information of AfisC3G07149


Location
GeneChrStartEndStrand
AfisC3G07149chr312760522221276057481-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241968.13.2e-58protein Dr1 homolog
SwissprotP49592.14.1e-55Negative cofactor 2-beta homolog
trEMBLG3MR929.2e-60CBFD_NFYB_HMF domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G23090.478.179e-62 232NF-YB13nuclear factor Y, subunit B13

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Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00808.20CBFD_NFYB_HMFDomain127662.43.3e-17

Gene Ontology
AccessionOntologyName
GO:0000122Pnegative regulation of transcription from RNA polymerase II promoter
GO:0001047Fcore promoter binding
GO:0001075Ftranscription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly
GO:0001129FRNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003682Fchromatin binding
GO:0003713Ftranscription coactivator activity
GO:0003714Ftranscription corepressor activity
GO:0004402Fhistone acetyltransferase activity
GO:0005671CAda2/Gcn5/Ada3 transcription activator complex
GO:0017025FTBP-class protein binding
GO:0017054Cnegative cofactor 2 complex
GO:0042766Pnucleosome mobilization
GO:0043966Phistone H3 acetylation
GO:0045898Pregulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:0046982Fprotein heterodimerization activity
GO:0050775Ppositive regulation of dendrite morphogenesis
GO:0050965Pdetection of temperature stimulus involved in sensory perception of pain
GO:0061408Ppositive regulation of transcription from RNA polymerase II promoter in response to heat stress
GO:1900446Pnegative regulation of tRNA transcription from RNA polymerase III promoter

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K21751DR1, NC2-beta; down-regulator of transcription 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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