Detail information of AfisC3G07154


Location
GeneChrStartEndStrand
AfisC3G07154chr312768367611276845363-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008787249.11.4e-122transcription termination factor MTERF2, chloroplastic
SwissprotF4IHL3.12.4e-90Protein EMBRYO DEFECTIVE 2219
trEMBLA0A8B7BX971.0e-122transcription termination factor MTERF2, chloroplastic

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G21710.154.170.0 630EMB2219Mitochondrial transcription termination factor family protein

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Ortholog group
SpeciesGenes
Allium cepag460402.t1
Allium fistulosumAfisC3G07154
Allium sativumAsa0G03834.1; Asa2G05924.1
Arabidopsis thalianaAT2G21710.1
Oryza sativaLOC_Os07g04230.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02536.11mTERFFamily18929526.13.6e-06
PF02536.11mTERFFamily284562189.09e-56

Gene Ontology
AccessionOntologyName
GO:0003727Fsingle-stranded RNA binding
GO:0005739Cmitochondrion
GO:0006351Ptranscription, DNA-templated
GO:0008380PRNA splicing
GO:0009506Cplasmodesma
GO:0009507Cchloroplast
GO:0009658Pchloroplast organization
GO:0009793Pembryo development ending in seed dormancy
GO:0019843FrRNA binding
GO:0042255Pribosome assembly

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15032MTERFD; mTERF domain-containing protein, mitochondrialEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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