result

Gene information

Detail information of AfisC3G07175

Location

Gene	Chr	Start	End	Strand
AfisC3G07175	chr3	1278982469	1278984463	-

Sequences

CDS

>AfisC3G07175
ATGTCACTCGTGTCCTTAAAATTCATCCTCTTCATCCTCCTCCTCCCATACACACCTTCCAAAGCCGATAACTTCACTTTCAACGGATTCACGGGAGCAAATCTAACCCTCCAAGGCGTAGCGACAATCACATCCAACGGCCTCCTCGCTCTAACAAACAAAACATCCAACAGATTCGGTCACGCCTTCTACCCAGCTCCCATAAAATTCAAATCCCCAACAAATAAAACTCTTTCTTTCTCCACCACCTTCGCCTTCGCCATCCTTCCAGAAGTCTCCTCGCTCGGCGGCAATGGCATAGTTTTCTCCATCTCACCAACAACTGACTTCTCCACCGCCACTCCAAGCCAGTATTTTGGTTTGTTCAATGAAACCAGCAACGGCAATTCAAATAATCACATATTTGCAGTCGAGCTGGACACCGTTCTAAATCCCGAGTTCCAAGACATCAACGACAATCACATCGGCATCGACTTCAATGGCTTGCATTCCATCAACTCCACCAGCCCTGGCTACTACGACGACGATGATTTTGGTACATTCAAAAACTTGACTCTCATAAGCGGTGACGCCATGCAAGTTTGGATCGACTATGATGCACAATACACAAAACTTGATGTCACCATGTCTCCGTTGGGCATGAATAAACCGAAAAATCCACTTCTATCGATTGTTTACGATCTATCCACCATTATGGAGGATTTCATGTACGTTGGGTTCTCGTCCGCCAACGGAGGATTTCACACTTCTCACTATGTCCTCGGATGGAGTTTTATCATGAATGGAACGAATGCGCCGTTACTCGACTACGCGTTGCTTCCTTCTGTCCCCGTTGTTAAAATAAAAGGCGGGTCAAAGGCTTTGGCAATATGGTTCCCAATCGCGTCATTGACTTTCATATCAATAGTTGTTATATCCATAATATGCGTGAGGAGGAGGAGGAAGTATGCGGAGTTGCTAGAAGACTGGGAGCAGGAATACGGAACGCATCGCTTTTCATACAAAGACCTGTTCCGAGCAACCAAAGGATTCAAGGAAAAAGAGCTACTCGGATCCGGAGGATCCGGCAGAGTCTACAAAGGCGTACTTCCCAGCTCGAAATTAGAAGTTGCAGTAAAGAAAGTGTCGCATGAATCAAGGCAAGGCATGAAGCAATTCGTAGCAGAAGTGGTCAGTCTAGGCCAACTTCGCCATAGAAACCTGGTTCAGCTACTTGGCTATTGTCGCCGCAGAGGCGAACTTTTACTGGTGTACGATTTCATGCCGAATGGCAGTTTGGATAAGTTTCTTTACGATAGGTCGAGGCCTACGTTGAATTGGAGACTGAGGTTTAAAATCATAAGAGGTGTGGCCTCGAGTCTTCTGTACTTGCACGAGGATTGGGAGCAGGTTGTGGTGCACAGGGATATCAAAGCTAGCAATGTGTTGCTTGACAGTGAGTTTAATGGAAGGTTGGGAGATTTCGGGCTTGCAAGGTTGTACGATCATGGAACGGATCCGCAGACGACGCATGTGGTTGGGACTATGGGCTATCTTGCACCTGAACTTGTAAGGATTGGGAAGGTGACTACTGCGACTGATGTGTATGCTTTTGGAGCTTTTTTGTTGGAAGTTGCTTGTGGAAGGAGGCCGGTTGATCTCAGTGCGGGTGTAGAAGAACATATGCTGGTGAGCTGGGTACTCAAGTGTTGGCAACGAGGGGCAATTTTGGAAGCAAGGGACTCCAGGTTGGGGGACGATTATGATGCGTTCCAGCTGAGTTTGGTTTTGAAGTTGGGGTTGTTGTGCTCCAACCCGGTGCCAGCGGCCAGACCCAGTATGAGGCAAGTGGTTCAGTACATTGAAGGAGATTTGACGCTCCCTGAATTGCCTCTCAGTTTTTCCAGCTTCAATGTGATTTCGCCTTTAACTAACGAAGGGTTAAGTAGTTCCTCAGTTAAAAATTCTTCTTTTTCATCCGTGTCGAGTCTTTCTAGCCTATCTGGGGGTAGGTAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256335.1	6.3e-260	L-type lectin-domain containing receptor kinase IV.1-like isoform X1
Swissprot	Q7XUN6.2	4.7e-212	Protein SALT INTOLERANCE 2
trEMBL	A0A8B8J9J8	6.1e-249	L-type lectin-domain containing receptor kinase SIT2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	57.10	0.0	744	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC3G07175	AT3G53810.1	655	264	10	24	664	26	677	57.10	744
AfisC3G07175	AT2G37710.1	658	261	11	20	664	22	675	57.75	733
AfisC3G07175	AT4G02410.1	658	277	9	20	664	24	674	54.86	709

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	23	265	270.9	9.3e-81
PF00069.22	Pkinase	Domain	344	612	155.2	1.9e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002229	P	defense response to oomycetes
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network