result

Gene information

Detail information of AfisC3G07534

Location

Gene	Chr	Start	End	Strand
AfisC3G07534	chr3	1339150841	1339151849	-

Sequences

CDS

Protein

Gene

>AfisC3G07534
ATGGTAAACAAATAACATAAACACTCACGTTTTGATTACTATAGAAAATTAATAATCAGATCGAGCCCAAACCGGATGACTTTCTGATAAAACCGAATCCGACTCTAATAGTAACCGGATCAGGCCTGAGTGGGACCAGGGTAGTTAGAGAAAAACTCATACCACTACAAGAAAACCTACTTTTGGTTGCAATTATTGGTAGCGTTTGTAGTGTAAGTGCTACCAATACTATATATGTATTTTTTTTAATGTTTTGCGGTGTAATTTTATGGTTTGGCTCTTGTCACATTTTTTAGGAATGTTTCCCTCCCGTGTTTCCTTTTTCCCTCCAACGTTTCACTTTTTCCCTCTTTCCCTCAAAATTTCCCTCTTTCCTCAAAATTTCCCTCTTTCCTTCAGAGATCGCCTCTGTCAATCTCCCCTCCGCTGGTTTGAATATCGATCAAATCTCCCCTCCGTTGTTTGAATATCGATCGAAACTCCCTTCGCTGGTCAATGGAGATCCCCAAAATCAACCACTAGATCGAATCTGTTGCTGCTGATCATCAGCATCTCCTCGGTGGAATCTCCTCTTCGCTTTGTTCACAAGGCCTGACTCTACAAATACAAGTATTTGTTGGTAAATTCAGATAATTTCTTTTCTGGTTTATAAAGCTCTTGAGTTTCACATTCAAACCTGATTCTCGTTTACAAACTTCGAAGTCCCTTCCATCATGAGATGAACTGATTTGTCTATTTGTTATTGTTTTAGGTTATTGCGATTAAGCAATTGAACAGAGATGGAATTCAAGGAAGCAAAGAGTTTTTAGTGGAAGTTCTTATGTTGAGCATGCTACATCATCCAAATCTGGTTACATTGCACGGATATTGTGCCGAAGGAGACGAGAGGTTATTAGTTTATGAATACATGCCTAAGGGCAGCTTGGAAGATCATTTATTCGGTAACTTTTCTGCTGACCTAATGACTAGTTCTCTTCATCATATACTTATTGTATTCATTGTTCTGAAG

Functional annotation

Database	accession number	e-value	annotation
nr	OAY75998.1	2.0e-25	Serine/threonine-protein kinase CDL1
Swissprot	Q9LDZ5.1	1.6e-24	Protein ALTERED SEED GERMINATION 5
trEMBL	A0A199VG60	1.4e-25	Serine/threonine-protein kinase CDL1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G18610.1	77.42	3e-26	114		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G07534	AT5G18610.2	62	14	58	119	108	169	77.42	3e-26	114
AfisC3G07534	AT5G18610.1	62	14	58	119	108	169	77.42	3e-26	114
AfisC3G07534	AT5G13160.1	68	19	52	119	105	172	72.06	4e-26	113

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	58	131	44.3	1.2e-11

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016021	C	integral component of membrane
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0040007	P	growth
GO:0007166	P	cell surface receptor signaling pathway
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0010183	P	pollen tube guidance
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0046777	P	protein autophosphorylation
GO:0071323	P	cellular response to chitin
GO:0090404	C	pollen tube tip
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network