Detail information of AfisC3G07690


Location
GeneChrStartEndStrand
AfisC3G07690chr313634626981363485006+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020249428.11.1e-122transcription factor-like protein DPB
SwissprotQ9FNY2.11.2e-97E2F dimerization partner protein B
trEMBLA0A1U7YP915.7e-121transcription factor-like protein DPB

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G03415.174.812e-110 395ATDPB;DPBTranscription factor DP

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02319.17E2F_TDPDomain10018187.92.9e-25
PF08781.7DPDomain189302131.41.8e-38

Gene Ontology
AccessionOntologyName
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0003677FDNA binding
GO:0003713Ftranscription coactivator activity
GO:0005737Ccytoplasm
GO:0005654Cnucleoplasm
GO:0005667Ctranscription factor complex
GO:0006977PDNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008134Ftranscription factor binding
GO:0008544Pepidermis development
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0019904Fprotein domain specific binding
GO:0042023PDNA endoreduplication
GO:0043276Panoikis
GO:0045944Ppositive regulation of transcription from RNA polymerase II promoter
GO:0046982Fprotein heterodimerization activity
GO:0070345Pnegative regulation of fat cell proliferation
GO:1900740Ppositive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway
GO:2000278Pregulation of DNA biosynthetic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04683TFDP1; transcription factor Dp-1EC:- TGF-beta signaling pathwayko04350
Cell cycleko04110

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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