Detail information of AfisC3G07708


Location
GeneChrStartEndStrand
AfisC3G07708chr313665494051366550010+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKNA24596.11.2e-25hypothetical protein SOVF_014220
SwissprotQ9C6P5.16.0e-25RAV1-like ethylene-responsive transcription factor At1g50680
trEMBLA0A0K9RYJ98.9e-26AP2/ERF domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G50680.137.672e-26 115AP2/B3 transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag531221.t1
Allium fistulosumAfisC3G07708
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family6416366.71.2e-18

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0009536Cplastid
GO:0009725Presponse to hormone
GO:0009908Pflower development
GO:0010073Pmeristem maintenance
GO:0010358Pleaf shaping
GO:0044212Ftranscription regulatory region DNA binding
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0019760Pglucosinolate metabolic process
GO:0043565Fsequence-specific DNA binding
GO:0080113Pregulation of seed growth
GO:0080167Presponse to karrikin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09287RAV; RAV-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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