result

Gene information

Detail information of AfisC3G08111

Location

Gene	Chr	Start	End	Strand
AfisC3G08111	chr3	1443439191	1443445672	+

Sequences

CDS

>AfisC3G08111
ATGGAAACATTGTTAAAAGCGTCATCTCAAAGTTACAGTGAAGACAACGAAGACGAAGGTCGTGAGACAAATACAGAAAAAAGCGAAAAGGATGATCAACTACAGTCAAACTTAAGTGAAATGAAAGAAGAGAATGAAAGACTAAAGATGATGATATCGCGAATCATGAATGATTATCAGTTGTTGCAGACGCGAATATCAAAAATTGCTTCAAGTGAACAATCTAAAATGGATATTAAAAACATTACTAGTCATATAAGCCACCAAGAGCCTCATGAATTTGTCACACTGAGTCTTGGTACAACGTACGTTGAGGGTAGAAAAGAAAAATTAAAGTCACTTAAATCAAAGGAAGACGCAAGCACTGTTGACGAAAGTTTAACTCTTGGACTTGATGAATTTGTAAATGCTAAAACGCAATATGTTTCAAGTTCTAGTCTTGAGGAAACTAAAAACCATGAAAATAAGGAGACATGGCCTCCTAGCAAAGTAGCCACATTGAGAAGTGAAGATGATGAAAGTAATGCTCTGTTGAACGATTCTGCAAAGAGAGCTAGAGTTTCTGTTAGAGCAAGATGTGATGCCTCAACTATGAACGATGGATGTCAATGGCGAAAATACGGGCAAAAGGTATCAAAGGGAAACCCCTGTCCTCGAGCTTACTATCGATGCACAGTTGCACCAAATTGTCCAGTAAGAAAGCAGGTGCAAAGATGTAAAGAGGACGAGTCTGTACTGATAACTACATATGAAGGCACACACAACCATGCACTTCCAGTCTCAGCAACGGCCATGGCTTCCACCACAGCTGCTGCTGCTTCAATGCTGTCTTCTGGCTCCATTGTCTCAAGGCAAAATGCTGCATTTTCCTTTGCATCCGAAGTTGCTTCGACGAGTAGTAGCTTTCAGAACATGGGTCAGAATCAGTTTTACTTGCAAAATCAGTTGATGACTCCATCTTCTTTGCATCCTACGGTCACTTTGGACCTCACCACTCCAAGGCAAAGTACATACAACAAGAACCCTACATATCCATGGAACCTGAGCTATTGGCAAAGACATGCTAACACGCCTCTCAACTCCAGCAACCTCAACATACCAAACGACATCATTGCAAAAGCAATCACATCAGATCCCAGTTTCCAATCAGTACTGCATACAGCTATATCTTCATATGTCACAGCAGGCAGTAACAATGGAGTTCAGGAAACTAGCACATCCCAGAAACTCACAAATTCATTCACATTTGATCAAGGCAATGAACACAAATGA

Protein

Gene

>AfisC3G08111
ATGGAAACATTGTTAAAAGCGTCATCTCAAAGTTACAGTGAAGACAACGAAGACGAAGGTCGTGAGACAAATACAGAAAAAAGCGAAAAGGTACAGTTCATCTTTCCCTTATTATTAGCTACTTGGACCGTAATGATATAATTGTTTCTACTGAAATTTCTCATATTATGAGCTTCTTAACAGGATGATCAACTACAGTCAAACTTAAGTGAAATGAAAGAAGAGAATGAAAGACTAAAGATGATGATATCGCGAATCATGAATGATTATCAGTTGTTGCAGACGCGAATATCAAAAATTGCTTCAAGTGAACAATCTAAAATGGATATTAAAAACATTACTAGTCATATAAGCCACCAAGAGCCTCATGAATTTGTCACACTGAGTCTTGGTACTTTTTTTTTTTTGTACGAACATAGATTGTGGACTTAAATTAATGGAACTTGCAATATATTTTTCCAGGTACAACGTACGTTGAGGGTAGAAAAGAAAAATTAAAGTCACTTAAATCAAAGGAAGACGCAAGCACTGTTGACGAAAGTTTAACTCTTGGACTTGATGAATTTGTAAATGCTAAAACGCAATATGTTTCAAGTTCTAGTCTTGAGGAAACTAAAAACCATGAAAATAAGGAGACATGGCCTCCTAGCAAAGTAGCCACATTGAGAAGTGAAGATGATGAAAGTAATGCTCTGTTGAACGATTCTGCAAAGAGAGCTAGAGTTTCTGTTAGAGCAAGATGTGATGCCTCAACTGTATGCACCATTTACTTCTTTTTTTCTTTTTGGTGCATGTGAGTTCATGTGCATGCATGGAGTTTCATTAGTTTTAGGCAATTATAGCTATGTTATAGAGTTCTTCTATGTTTCAGACGGAAAGTATAATGGTCATCTGCATCCTAGCTCATTTTGATTATGAATTTTATGATATATTTGTCTTGAACTTTATGAACAACCTTTGATTTGTATTTGGGGATATATCAAAGAAAGATAGAAAATTATTGGTTAATATGTTCATTCAGTATAATAGTACATTGAAAGTTCAGATTATATATGGCTCATAAACTGATAAACAGATTTTATATTTTGAAAAACTTTACAGATGAACGATGGATGTCAATGGCGAAAATACGGGCAAAAGGTATCAAAGGGAAACCCCTGTCCTCGAGCTTACTATCGATGCACAGTTGCACCAAATTGTCCAGTAAGAAAGCAGGTAATAATCTTTACACAAATTATACGTTCAAATCCTTTTTCAAAGCTTGTTGCTTAATATTCATGATACGGTACTTTTTACAGGTGCAAAGATGTAAAGAGGACGAGTCTGTACTGATAACTACATATGAAGGCACACACAACCATGCACTTCCAGTCTCAGCAACGGCCATGGCTTCCACCACAGCTGCTGCTGCTTCAATGCTGTCTTCTGGCTCCATTGTCTCAAGGCAAAATGCTGCATTTTCCTTTGCATCCGAAGTTGCTTCGACGAGTAGTAGCTTTCAGAACATGGGTCAGAATCAGTTTTACTTGCAAAATCAGTTGATGACTCCATCTTCTTTGCATCCTACGGTCACTTTGGACCTCACCACTCCAAGGTATTTTAACATCGAGTCCATGTTTAGCTGTAGTTTAGTATCTTTTATCATTTATATATAAAATTTATATATTTGCTGGTTCTCCGCAAATATCTGTAAAATTTCCGCTAATATGCTGAAACTTAAAAAAATGGTCTCCTCAACTATTTATGGAGAAATATGCAAATATTTGTATAAACTCTACGGATATTGCAGGCTTTTGGATTGCAAATATTTGCATAGTTCTCTTTTGTCTTGATTATATAAAAATATACTATTGATGTATAGATTTGATTTTTAAAAAATGTAGAAAAAAACATTTGCGAAGGTTTTTCACTTAATAAAACTGAAAATAAGAGACGAACCAAAATTTCAACTTCTATAAAATACTACGCAAGAAGTTATACATGTGAAGTCAAAACTCACAAGTGTAATGGTAAGTATTCTAGTTTTAAACTTGAATGTTTGAAAAATGTTCACATTTGCTACTAGCTAGCAACAAACTAGTTGCAGAAGACTTTTAAAGCATATGTGCTAGTAGCTCCAAAACGAAAAAGGATAAATCTAACACACAGCTATAAGTGCACAGTAGAAGTTTGGAAGCCAGATTTAGGTTGATCATATATACTACATATTTACATAGACATGCATTTCATTCATTGGGCACGGATTGTTAAGGTTTAACTGCGAAAAACCTATCAGATGAAAGAGGTTGCCGAAACGTTTTTTTCTAAGATTTTATATCACCTATAGTTTCGGATAAAAATAACATGACAACCCACAAAACAACTATTATGATGAATTTCAAACAAACAAATCCAGCACAAGCAAAAAATTTACCCAGCCAATTCTTTTATGTTTTTTTATTGGTTCTCAACAATTATTTATGATTAATATACCAAACATAAGTAGACGACCAATAAGCGGATCATCAATTGGAAGAAAAGATTAACAAATGAGTCGTATCGGTAATCTAGATTGAGAACGAAACTTATACGTTGTGGCAGTGGCTTATTTTGTTGGGAGATTGTAATTTGAGTTCCCACGTCTGAGTTGATAATATAGCAAGATATATATTAAGTAGAGAAAATACAAGTACACAAATGCGTATCATAGTTTTGAGTCAAATTCTATTTAAACACACCAACACGCTGAATAGCCCTCCAAACCTTGAAAAAAACGAAAACAACTCTCGTTTTGCTGAATTGTCTCCTATTCCAAAAAAAAATTTCAAAAAATACCATTTCACGTAATGGCTCTACGTGTTGCTCTGAAAGCACCACGTAGAGCCGCTGCGTGGTACGTTTAGAGTACCACACAAATCCACTGTGGGTTAACGGAAAATTTGAAAAAAAAACATAAATTTAAACAAAAATAATCAAGGGGTATTTTTTCCTTCAATTTTTTGTAAACATAGAGGGTCGCTCAGCAAGTTGCAGGGTTTAAATAGAATTTGCCTAGTTTTGAAGATCAAATCGTAAGTCAAACTATGTTGGTGCAAAGTCAAAAGTTTTGGTGGTTGATCATTATTTTCTATTTCTCCTATTTAAATGTAAAATTATTTTAATTAATATTAAAATTTAACCAATTATAATTAATATATTGAACTTTAAAACAATTATTCTTAAACAGTTCATAACAAGTATTAACTGAAATAATTCTATAATAATTTTTTTACCGCAAATTATAAATTTTCTTATTTTTTGAAATGAAAGTGGTTCGGTTCAGTAATGATTCATAAAATGTACGCGCTGATAATGTATAATGTTGTCCAAAATTGATAAAATAATCCAATAATTTTGTGGCTCAAGTTACGAAATTATCTATTAATTTGATTATGTGAAAAAATATAGAGTGAAGCTATAGTTTTTCCTCAAAATTGAAGAACCGTGTGATTTAAAGAGGTTGATGCAGAGGTTATTTTTAAGATTTTAAGATTAGACCGTCGGTTTATGCACGCACAATGCTATTTTTTTTCTAGAGCCGTAGTGCTCTGGGATTAAATATTAACCGTGATCGAACCGATGTTGGATTGGGTAATGTTTCTACTCTGAATTTTGTGTCAATACGCATACATTAATACTTCCCTTTAACACAAAATCACATGTTTAGTACCCACTACTTTAGTGGAATGACACTACACTCGTTCATAACTCGATTTAAGCTCACTGCGATCATCATTGATACTTTGAGCATCATATCGAAAACATGGCCATCAGCAAGATCAAAGCGATGCTCACGTTAATCTATTTATCTAATTGTGAACTAGCCTCTCCAACCGTGATTTGCTTTCCAGTGTTGGATCCCATAACTTACAAATCTATAAGAGAAATCCATCCACTGCTTCTCAAATCACAACACAACCTTTTTTTTTTACGTCACAAAGTTCTACTTCGAGTCTCGTTGGTGCAACCACGGTGATTCAATTGACCAACATAAATTAGTTTATAAGAACTAGTCAGCACGTCTCATGTCCGAGGCTCTCTACCCACACCATCACGTTGACAAATTCGAACATATACAATACCACAAGGAATATGGAAACTTATACTCTGGTTGCATTTACGACGAAAGAAAACGGGGTATTTGAACGGGGAAATTTAGTGAATGAGGAATGTGTTTGCGGCTACGAATGAGGTATTTGAGTGGGACATTTAAGTTGTGATTTTTAATTTAATTGATTTATAGTTTATTAATTAATTATTTATCTTTTAATAAATAATACGTAACAATAGTTTGCAAAAATAAATAAATTGAAAATTATAAATTGTTCAGATTCAATTCAAACCAACTTTATAATGTAGAGCACTTTGATACGGTTGCAACGCAAAAATCCGGGTTTCAAATGGATCTCATTTGTACAAGCTATTAGTTTAAGAAATTTATAAAAATATAAATTTTATTAATTAACGTACTTAAAGCAACGAACGTAGCAGAAATCATCATTCAGCAAAACGGTGAATTAGGCCCGTTTACCTTCGTGACGCGTCACCAAGGTAAACGGGCTAAAATTTTCGTTCGAACGCATCCTCTATATGTTGTTTTTGACAAAAAAAACCAAAACAAAGCAAAATTTGATTTGTGATTGCATTTAATTTTCACGCACTATATTAAGGTGCATATAATACAGTAATCCATCTTTGTTAAACTTTGTGAGCCACAGAGTTTACGGGGAATCACATTGTTTTTGGGGACAAATTTTAGGTTTAGGCTCAAGAAAAGAAACATATTTCAACCTTAGGTCTTATTCCAAACCTATTACAAAAATAGATTCAAATTCTGATATGGAGAAAAATAGACTTATTTTTGCAATAAGTTTTTAACGAGGTCTAAAGTTGAAATATGTTATTTTCTCGATTTAATCCAGTAGGCATCCAAAGTTTTTTTTATTTTTCCTTATATCTCCTATTTTACTTTTGGACAAATTTTGTTATAGGTAGAAAAGAAAAAAAAAACATTTTCAACTTTAGACCTCAAACAAAACTTATTATAAAAATAGGTCTAGTTTTGTACAATTCAAATTTGTACAAGTATATGTGTGTATACACACACACACACAACCGCGCACTTGTGCAATTCAAATTTACTCCAACCCAATTTTTTTTTAAATTACACTTGCGCAATCCAAATGTTGTTATATGCAAAAGAAAATATATTTTTATAATAAGTTTTAAACGGGACCTAAAGTTGAAATAGGTTATTTTTTGTACTTGTAAGAAAATTTTGTCTTTTTAATTTTTCCTCTAACATCAATATTTTTCCAAACTATTACAGGCAAAGTACATACAACAAGAACCCTACATATCCATGGAACCTGAGCTATTGGCAAAGACATGCTAACACGCCTCTCAACTCCAGCAACCTCAACATACCAAACGACATCATTGCAAAAGCAATCACATCAGATCCCAGTTTCCAATCAGTACTGCATACAGCTATATCTTCATATGTCACAGCAGGCAGTAACAATGGAGTTCAGGAAACTAGCACATCCCAGAAACTCACAAATTCATTCACATTTGATCAAGGCAATGAACACAAATGATTAGCAGAAAAATCTAAAGAGATGCCAACTCCATTATACTTCTAATTTACATAGTTCATACTTAGATCGTCGTAAAAGATTGCAAATACTAAGATTGTTGTGCAAGATAGAAGTTGCTCAATGACTTCACATTCAAACATGTATATGATTCATATAAAAACTTCCATTGGATAATTTTCATACTCATTTGTAATATATGTGGAGCATAATAAGCAATTTACAATTTTTTTTTCTTTTTACTTTTTTTACAAATAAAAGATCTAAAATCCAGAATTATGATTACATATACACAATTGCAATATTCGAGATATCTCAGCAACAACTCCTCGATATGCCTTTGTATCGATAAGTGCCACTATACTGTATTTGAGAAGAAACCAAACTTTGAGAAGACGGTCATTGTTGCCCCCATCCTAGAAATGCATGGTAAGTAGTATTATCAGGATTGCAACTGTGCAAATCAGTGCCTGCAGATAATTGACAAAGGAAAGTAATTTAGTTTAATTTTTGTAGAAATTCAGACAGTTCAGTAGCAGAATGCTCATCGCATCAGCTGTAGTTTATCCCCTTAATTGATGTTCATATTTTCCCCAAACAGAACTGTTATATGCATTTCTTCCTGTGCTCCTGCATTTCACTTTCTTGAATTACTTAATGTGTAAAGCATAGAAAGTGGAGCATGGGAGTAAAACGTAAAAGAACATATCCCTTTCGCAAAATGCCTTGATTTTACTTTTTGCTCCTCTCGTTGAATAATATTATTCCTAGTGATATGTACATGGATGAACAAGAATGTATTGCACTATTGCATAAAACATATTTTTGAAGTAAATGAAAACAAGCCAAAATTAAAATAACACTGGA

Functional annotation

Database	accession number	e-value	annotation
nr	OAY77765.1	5.5e-60	putative WRKY transcription factor 72
Swissprot	A0A3Q7GFB5.1	3.0e-50	WRKY DNA-binding protein 72A
trEMBL	A0A199VM11	4.0e-60	Putative WRKY transcription factor 72

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G15130.1	38.46	8e-65	244	ATWRKY72;WRKY72	WRKY DNA-binding protein 72

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08111	AT5G15130.1	494	212	17	1	414	1	482	38.46	8e-65	244
AfisC3G08111	AT4G04450.1	354	177	11	4	331	84	416	36.72	5e-49	192
AfisC3G08111	AT1G68150.1	250	104	7	33	276	96	312	42.80	9e-47	184

Ortholog group

Species	Genes
Allium cepa	g458925.t1
Allium fistulosum	AfisC3G08111
Allium sativum	Asa2G06691.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	199	256	92.2	1.7e-26

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0002237	P	response to molecule of bacterial origin
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0009611	P	response to wounding
GO:0009685	P	gibberellin metabolic process
GO:0009751	P	response to salicylic acid
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0016036	P	cellular response to phosphate starvation
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding
GO:0050691	P	regulation of defense response to virus by host
GO:0080169	P	cellular response to boron-containing substance deprivation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network