Gene | Chr | Start | End | Strand |
---|---|---|---|---|
AfisC3G08244 | chr3 | 1465307532 | 1465313831 | + |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_008785104.2 | 2.2e-109 | transcription termination factor MTERF8, chloroplastic-like |
Swissprot | Q9FK23.1 | 1.8e-95 | Protein PLASTID TRANSCRIPTIONALLY ACTIVE 15 |
trEMBL | A0A8B8ZT22 | 2.5e-110 | transcription termination factor MTERF8, chloroplastic-like |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT5G54180.1 | 53.43 | 1e-99 | 360 | PTAC15 | plastid transcriptionally active 15 |
Species | Genes |
---|---|
Allium cepa | g110425.t1 |
Allium fistulosum | AfisC3G08244 |
Allium sativum | Asa2G06793.1 |
Arabidopsis thaliana | AT5G54180.1 |
Oryza sativa |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF02536.11 | mTERF | Family | 99 | 400 | 153.3 | 6.6e-45 |
Accession | Ontology | Name |
---|---|---|
GO:0003727 | F | single-stranded RNA binding |
GO:0005739 | C | mitochondrion |
GO:0006351 | P | transcription, DNA-templated |
GO:0008380 | P | RNA splicing |
GO:0009507 | C | chloroplast |
GO:0009508 | C | plastid chromosome |
GO:0009658 | P | chloroplast organization |
GO:0019843 | F | rRNA binding |
GO:0032502 | P | developmental process |
GO:0042255 | P | ribosome assembly |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
K15032 | MTERFD; mTERF domain-containing protein, mitochondrial | EC:- | - | - |