result

Gene information

Detail information of AfisC3G08446

Location

Gene	Chr	Start	End	Strand
AfisC3G08446	chr3	1503851609	1503853346	-

Sequences

CDS

Protein

Gene

>AfisC3G08446
CTTACAACAAATAAGACACTTAAGAAAATGAAGAGAAGCGAAGCAGAATGGGAACAACTTCTCCATGTATATCTATTTCTTCTTCTCATTCATACAAATATGCTGTATGTTGTTATATGATTATATCTATGTGGCATAGTTTATATATTTCAAATCATATATAACAGGCTATGAATGACAATATAAGTGGAGTGGCAGGAGGTAGACATAGAGCTGCTTTGTCCAGGAATTTATTGTCAACTCCAAAGCAACAATACTCGAGCATTCCAGGTACAATGGAGTCACAGTCTTCTTTGTGTAGCATGAACATATAAGCTTTTCTTTAGTTAAAATTTACTCTATCTTCTTTTATTAAGCTTTGTTATATTTTAAAAGAAAGGAAGAGTCCTGTTGATATGGCGTCCAGATCAGAAAGATATAGTTGTCTAAATCAGCTGATAAATTCTTTTTTGATTTTTTTTAATCTTGGTAGAGGATGATTAATTCAATTTCTTTGTTCATGCATGTTATAGAAATTCACATGTGGAATAATACAGAAAACTGCTGATATATCTTGTATTTGGTCGATAGCCTTTGTTATAATGCATCGACGCATGATTGTTTTTCTTCTTTCTTTTTTGGCTAAATTCAATACAAAACTTCAGCTGTAAACTGCAAGCCAACTAAAGTGGTAGGTGCAAAGAAAGCCAAATTAGCAGGTGGATGCAGAGTTACTAGCGGTTCTGATGGCCAATCTGATGACAACGACGATGAACTATTCGAATTCGAAAATGGATTATCTGATCCTAACATCATCGACGTAAAACGCATGAGAAGGTATCTAATATATTTTCTACATATTTACGTTGAATAAAATATACCTGATGTTTCTTTATAAATTTAAGCAACATGGCTGTAACTTTATTATATTGAAGGATGATTTCGAACCGTGAATCTGCCAGACGATCTAGAACGAGGAAGCAAGCTCAACAAATAGATCTTGAACTACAGGTCATAAAAAAGAGATCTTATCATTGTGTTATACACACACAATATCCCAAAAGTTACCTATTTATACACAGAATAAAACATACATATTATCATATACATGTTACCAGGTTGATCAACTAAGAGGAGAAAGTGCAGCACTATACAAACAATTCACAGATGCTAACCACCAATTCACGGTTGCAGTTAACGACAACAGAGTTCTCAAATCAAATGTAGAAGCCATTAGAATCAAGGTAACAGTTTTCCATTTACTGAAAAATGATTCGAATAGGTAGTAAATAAAATATATGTATATATATAATGCATGAAACAAATGTACAGGTAAAGATGGCTGAAGATATGCTGACTAGAGGTTCTTTACCGTGTGGCCTCGATATGGTAGACATGAATATCATGGATCAAATACAAGAAAATGGAGGGTGTAGTGGTAATTTTCAAGGGGGTGATATGGGTGTGGGTATGAATGCTGGCTTTGACAATTTGCACAGTGTGATTTCAAGCGAGATCACGAGCTGCGAAACCGATGTTTGGTCCTGGGGTTCTCCTACTGCTGATGTTATATCCAAGCCGCAAATTATCTAAGTTCTTTTATAGTTCACTGTTTAGTGTGTTATACTAGTAGGTGGCATGTATGTGATTGTAATGTTATAAGCTATGTATAATGTTGTGTATTGGTGGCTAAGGATCTATGTCATATTAAGATATTTCTGTACTTAAAAGGAATTTAAATCAGATTATCAGAATGTGG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269862.1	1.2e-36	basic leucine zipper 9
Swissprot	Q6ETX0.1	4.0e-34	bZIP transcription factor 20
trEMBL	A0A835Q581	3.5e-35	BZIP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G24800.1	42.79	4e-31	131	ATBZIP9;BZIP9;BZO2H2	basic leucine zipper 9

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08446	AT5G24800.1	208	89	8	57	242	77	276	42.79	4e-31	131
AfisC3G08446	AT5G28770.2	126	62	1	57	182	115	234	46.03	9e-15	77.4
AfisC3G08446	AT5G28770.1	126	62	1	57	182	108	227	46.03	9e-15	77.4

Ortholog group

Species	Genes
Allium cepa	g229292.t1
Allium fistulosum	AfisC3G08446
Allium sativum	Asa2G06963.1
Arabidopsis thaliana	AT5G24800.1
Oryza sativa	LOC_Os02g07840.1; LOC_Os02g07840.2; LOC_Os02g16680.1; LOC_Os02g16680.2; LOC_Os06g45140.1; LOC_Os06g45140.2; LOC_Os06g45140.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00170.18	bZIP_1	Family	100	144	47.5	1.3e-12

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0042803	F	protein homodimerization activity
GO:0046982	F	protein heterodimerization activity
GO:0071215	P	cellular response to abscisic acid stimulus
GO:0071333	P	cellular response to glucose stimulus
GO:2000693	P	positive regulation of seed maturation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network