result

Gene information

Detail information of AfisC3G08542

Location

Gene	Chr	Start	End	Strand
AfisC3G08542	chr3	1521681582	1521684388	+

Sequences

CDS

>AfisC3G08542
ATGGAAGAAATTACAGCTAATACCCTTGATTCCCCCGGATCTGAGTGCAAAACCCTTCTTCACGGCCGCTACGAACTCGGCCGACTTCTAGGGCACGGAACGTTCGCGAAAGTATATTTGGCGAGAAATCTGAAGACGAATTTGAACGTCGCCATGAAAGTCGTGGCGAAAGAGAAGATTATAAGAGTAAACATGATGGAGCAGGTTAAGAGAGAGATTTCGGTGATGAAAATGGTTTCGCACCCCAATATAGTGGAGCTGCATGAAGTTATGGCAACGAAATCAAAGATTTTCTTCGCCATGGAACTTGTGAGAGGCGGAGAGTTGTTTTCAAGGATTGCAAAGCATGGGAGGCTGAAGGAGGAGTGTGCTAGGCACTATTTCAAACAGCTTGTGTCTGCCATTGATTTTTGTCATAGTCGTGGTGTTTATCATAGGGATTTAAAACCCGAGAATCTGTTACTGGACGATCAAGGTAATCTAAAGATCGCCGACTTTGGTTTAAGCGCCTTTGCCGGGCCGGATGGATTGCTTCACACTACGTGTGGGACTCCAGCTTATGCTGCTCCTGAAGTCATTGCTAATAAAGGATATGATGGCGCAAAGGCAGATTTATGGTCTTGTGGGGTCATCTTATATGTTCTTCTTGCAGGTTTCCTGCCATTTCAGGACGACAACATCGTGGCCATGTACAAAAAGATCTGCAAAGGCGACTTCAGATGCCCACCATGGTTCTCCTCAGAGGCCCGTCGCCTAGTGACCAAACTCCTCGACCCAGACCCAACAACCCGTATCTCCGTGGACAAAATCATAGACTCCACATGGTTCAAAAAAGCTCCTCAGAAACCTCCATTACCACCACCTTTACCATCACCATTATTATCACCGCCTCCAAAAAAGGAAGTAGAAGACCTACCCGAAAAATTCAATGCATTTCACCTCATCTCCCTCTCTCAAGGTTTCAACCTCTCCCCTCTATTCGAGGATGGCACGAAGAAAGAAGACGACATAAGGTTCGCCACTAAAGAGCCAGTAAGTGGAGTGATATCGATATTAGAAGGTGTAGCCGCCAAGGCAAATGGAAGAATTAAGGTCACAAAAAGCTCTGCGGCTGGAGTTCGATTAGAAGGAAAAGAATCAAGAAGCAGAAAAGGGAAACTCTCTGTAGCTGCAGATATATTCTCTGTTGCACCTTCTGTTTTAGTTGTGGAGGTTAGAAAAGAGAAAGGAGATACATTTGAGTTCAAAAGCTTTTGCAGAGATGAACTGAGACCGGCACTGAAGGACATTGTCTGGGCCGCTGCCTCTGACCATCAACCAGGTGCATTGCCTTACTGTGTTAATTAA

Protein

Gene

>AfisC3G08542
AATCAATCAAATTAAGATTCCCTCTCTTCTCTCCTCATAGTACAAAACTTTCTCTCCGCTCAATAATTGTCTTTTGCCAGGGAATGCCGCAGCACAATGAGACGGTTCACAGATCCTGAGCTAATCGGACGGCGGCGGAAGAAGCCCGCGTGCCGCACGTGCCACCGCAAGCACGTTTTCCTGTTAGCTCCCCTTGATTTCTCAATCTTCTTTCCTTTCTCTCAGTAAAAAAATCCCTATTTATTTTTTGCAATAATGGAAGAAATTACAGCTAATACCCTTGATTCCCCCGGATCTGAGTGCAAAACCCTTCTTCACGGCCGCTACGAACTCGGCCGACTTCTAGGGCACGGAACGTTCGCGAAAGTATATTTGGCGAGAAATCTGAAGACGAATTTGAACGTCGCCATGAAAGTCGTGGCGAAAGAGAAGATTATAAGAGTAAACATGATGGAGCAGGTTAAGAGAGAGATTTCGGTGATGAAAATGGTTTCGCACCCCAATATAGTGGAGCTGCATGAAGTTATGGCAACGAAATCAAAGATTTTCTTCGCCATGGAACTTGTGAGAGGCGGAGAGTTGTTTTCAAGGATTGCAAAGCATGGGAGGCTGAAGGAGGAGTGTGCTAGGCACTATTTCAAACAGCTTGTGTCTGCCATTGATTTTTGTCATAGTCGTGGTGTTTATCATAGGGATTTAAAACCCGAGAATCTGTTACTGGACGATCAAGGTATTTTACTGGTTGAACAATTTTTTATTATTGAACAGTGATTAAAATTTGAAAAATTGGTGGATGTATAGGTAATCTAAAGATCGCCGACTTTGGTTTAAGCGCCTTTGCCGGGCCGGATGGATTGCTTCACACTACGTGTGGGACTCCAGCTTATGCTGCTCCTGAAGTCATTGCTAATAAAGGATATGATGGCGCAAAGGCAGATTTATGGTCTTGTGGGGTCATCTTATATGTTCTTCTTGCAGGTTTCCTGCCATTTCAGGTATATATCCATCTACCCATCACATAATTGTTTGTATATAAAATCAACATGATTGTATTTTATGTGATTTTTATATATTTTTTCCAACTTGTACCAACTAGCAGGATTAAAGAGACTTCAAATTTCAGCTTATCTTTATAAAAATGATATTAAGTGATTTTAATCTATACCTAACGTCAACTATGATTAATATTGGCATTATTTGCTGATATTTTTTGTAGAGTTCAAGTCTCTTAGCTAACCTCTAGTCATTGAACAAAATTTGGTTCACAGAATTACTTAGTTTATAAGTTTTTCTGTTGCTTGCATGAATGTTAATTTGTCCTTGTGCATGATGTATCAAGTGTCACATGGTGTGTATGATATGATATTTCCGTGGGCTGTTGTCCCACGTACTATCATGTCTATCAGATTACCTCATGTAAAACTTGAAAACCTCCAGAAGGGTAAATTTTACATCTAATGTATTGTTGTAATGTATAGTTAAATGTAGCTAGTTCATTGCATGCGTAAAAAGTAGCTAAACTTGATATTGTAGATTCTGTAAACTGTTAAATGATTACAAATATAAAAGTGTTATATCATGTTTTCAAAGTTCAATCCCAACCTTCCATCTCGTTATAACATCCAAAAATTTAACATATCTAATGTATTGATGCATGTTCAGATCTTAAAACGTATCTATATTAAATTATAGGACGACAACATCGTGGCCATGTACAAAAAGATCTGCAAAGGCGACTTCAGATGCCCACCATGGTTCTCCTCAGAGGCCCGTCGCCTAGTGACCAAACTCCTCGACCCAGACCCAACAACCCGTATCTCCGTGGACAAAATCATAGACTCCACATGGTTCAAAAAAGCTCCTCAGAAACCTCCATTACCACCACCTTTACCATCACCATTATTATCACCGCCTCCAAAAAAGGAAGTAGAAGACCTACCCGAAAAATTCAATGCATTTCACCTCATCTCCCTCTCTCAAGGTTTCAACCTCTCCCCTCTATTCGAGGATGGCACGAAGAAAGAAGACGACATAAGGTTCGCCACTAAAGAGCCAGTAAGTGGAGTGATATCGATATTAGAAGGTGTAGCCGCCAAGGCAAATGGAAGAATTAAGGTCACAAAAAGCTCTGCGGCTGGAGTTCGATTAGAAGGAAAAGAATCAAGAAGCAGAAAAGGGAAACTCTCTGTAGCTGCAGATATATTCTCTGTTGCACCTTCTGTTTTAGTTGTGGAGGTTAGAAAAGAGAAAGGAGATACATTTGAGTTCAAAAGCTTTTGCAGAGATGAACTGAGACCGGCACTGAAGGACATTGTCTGGGCCGCTGCCTCTGACCATCAACCAGGTGCATTGCCTTACTGTGTTAATTAATTCCTTTGGTTTTATTAAAATTAGGTTTAAATTTTAGGTTGTCATTGAAATTGAAATGGGGTCATTTGAATGTGGGATGTGGGGTTGTAATAATTGAAGGAGGATATGAGATATGATATCTATTTCTGTTGTTTTTGTTCAATAATTGTGCTTGGGTTTGGTGGACTGTGTGTTGCAAAATGGAAATGTGGGGTACAGTTGTTGAGTGTTGGTTTGTCATTGTGCTTTCAGAAACTTTTCTTTTCGGTGTTGTATCTTTTGGATAAGGATTGTTTGTCTTTGATGGTTCATAAAGTTTGTATATCTGTTTTTGATTCATTTCATTTGTAGGTTTATAAAGTTGTATCTCTGTTTTTTGATTTGTTGCATTAATTGAGTATGTAAGTTGCATCAGAATTCACGTAGTTTTGTATAGTTTGGCACGATGAAATAGTAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008783865.1	2.2e-176	CBL-interacting protein kinase 6-like
Swissprot	Q6Z9F4.1	1.8e-162	OsCIPK06
trEMBL	A0A8B7BRF9	3.6e-176	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G30960.1	64.30	2e-153	538	ATCIPK6;CIPK6;SIP3;SNRK3.14	SOS3-interacting protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08542	AT4G30960.1	437	136	9	11	435	11	439	64.30	2e-153	538
AfisC3G08542	AT5G45820.1	429	165	9	19	432	7	421	54.78	8e-134	473
AfisC3G08542	AT4G18700.1	462	187	8	2	431	3	456	50.87	7e-128	454

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	24	276	250.1	2.1e-74
PF03822.11	NAF	Domain	306	363	63.4	1.4e-17

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005986	P	sucrose biosynthetic process
GO:0006814	P	sodium ion transport
GO:0006979	P	response to oxidative stress
GO:0007275	P	multicellular organism development
GO:0007584	P	response to nutrient
GO:0009414	P	response to water deprivation
GO:0009507	C	chloroplast
GO:0009737	P	response to abscisic acid
GO:0010107	P	potassium ion import
GO:0010118	P	stomatal movement
GO:0010325	P	raffinose family oligosaccharide biosynthetic process
GO:0010540	P	basipetal auxin transport
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0019593	P	mannitol biosynthetic process
GO:0042538	P	hyperosmotic salinity response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07198	PRKAA, AMPK; 5'-AMP-activated protein kinase, catalytic alpha subunit	EC:2.7.11.11	Apelin signaling pathway	ko04371
			FoxO signaling pathway	ko04068
			PI3K-Akt signaling pathway	ko04151
			AMPK signaling pathway	ko04152
			mTOR signaling pathway	ko04150
			Autophagy - animal	ko04140
			Tight junction	ko04530
			Insulin signaling pathway	ko04910
			Glucagon signaling pathway	ko04922
			Adipocytokine signaling pathway	ko04920
			Oxytocin signaling pathway	ko04921
			Axon regeneration	ko04361
			Longevity regulating pathway	ko04211
			Longevity regulating pathway - multiple species	ko04213
			Circadian rhythm	ko04710
			Thermogenesis	ko04714
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network