result

Gene information

Detail information of AfisC3G08655

Location

Gene	Chr	Start	End	Strand
AfisC3G08655	chr3	1539626191	1539628766	-

Sequences

CDS

>AfisC3G08655
ATGAATTCTTTGCAGATTTCCCACGCTTTTCTCATTCTTTTTGCCTTCATCTTGATCATACAACCATCCAAAATCTCTTCACAAAACCCATCTCCTTCTCAAATCAGAACCATCTTCCGACTTCAGAAAATCCTCGAATATCCATCTTCTCTATCAAATCTAAACAACATAGCAAACATCTGCTACTTACCATATTCGAAATCATTATCAATCTCCTGTTATGGCACAAGAATAACTCAACTTAGCGTACTGGGTAACAGTACAACTCCACTATCATCCTCATTCTCCATTGATTCTCTCTTCACTACACTCTCCAGACTTCCGAGTCTCACTTCTCTTTCTCTTGTCTCTCTTGGCATACATGGCCCGCTACCCGATAAGCTTCATCGCCTTTCCGCACTTAAAGTTATCAACTTGAGCTCAAATTACATTAATGGTGCCATCCCAAATGTTATTTCTTCGATGACTAGCCTTGAAAGCATTGTTCTAAGTAGCAACAAGTTCAATGGAACAGTTCCCAGCCTTAAGAGTTTGACATCTCTTAAAGAGCTAGACTTAAAAGGGAACAACCTCCGTGGTGATGTTCCTTCATATTTGTTCTCAAAGCCATTGATTCAACGCTTGGATTTATCGAAAAATCGATTTACAGGAGCTTTTCCAGGAAGACTTTCTTGTAGCAAAAGTTTAGAATTTGTAGATATTTCTAGCAATTTTTTAGTGGGTGAATTGCCATCTTGTTTAAGTTCGAACTCGTCGACAAGAGTAGTGTTGAATTCATGGAACTGCCTCAATTCTAAGTACCAACACATGAAGTCTTTCTGTAGCAGAGATCCACTGGCTGCAGTTTTGCCTCCTATGAAGAAAACACAGGGGTCCAAGAGCAAAACTGGTTTAATACTAGCTATTGTAGGAGGAGTTATTGGTAGTGCAGCAGTGTTGCTTCTGCTGTTGTTCTTCATCATGAGGTCAAAATCAAGAAAAATGGACTTTAGCAAATCAAAACATGTTCAAGTTAAAACTCCAGTTTACGCGTCTCCAAGGACAGCTGCAGACACAAGACATATGTCCCAAGCAGTGAGGATAGGTACACATGGGCTAACCCCATACCGCGTATTTTCTATGGATGAACTTGAAGAAGCTACTAATTCATTTGATCCATCAAATTTAATTTTCGATGGCCCTCAGGGACAGTGCTATAAAGGGTGGATCAGAGATGGATCTGCAGTTGTTGCGAGAGGTATGAAGCTAAAACAAAAGATATCACCTCAGAACTTAAGTCAATACATGGATGTGATATCAAAACTAAGGCATATCAACTTGGTAAGCATTCTTGGTCATTGCATTCCCAATGGTCAAGATCATAATGGCTTTGTCAATGACACCATCTTCATAGTTGCTGAGCATGTTTCTAATGGAAATTTAAGGAGCCATCTTACTGATTGGAGGAAGAGAGAGATGCTGAAATGGCCACAGAGAGTATCGGCAGTCATAGGAGTTGCAAGAGGAATACAATTTTTACATACAGTAACAGTTCCAGGCATTTTTGGTAATGATCTTCGAATTGAGAATATATTGGTTGATCAAACTCTTACAGCCAAAATCAGCAACTACAATCTACCGGTACTACTGAACAACAAGAACAAGAAGGTATTAGTGTTTCATTTTTTTAGTTATCCAAATATGGAAAATGGCGAAAAGGACGATGTGTATCAGCTTGGCCTCATCCTACTAGAAGTAATTACAGGCAAGCCAAATGGATCAAAAGATCAACTGGAAGCATTAAAAACCAAGCTGCAAGATTGCTTAACTGATGATGAAAGAGGAATAAGGCTGAAAGAGGTAACGGACCCTACTATTCGTGGCACCTTTGCAGTAGACGCGATGCGCACGTTAATTGCAGTGACATTAAATTGTGTTGCTAAAGATCATAGAGAAAGGCCATCCATCGATGATATATTATGGAATTTGCAGTACTCAGTTCAAATTCAAGATGGCTGGACAAGTAGTGATAGCCTTAGTGTTCATTCATATCAGCCCTGA

Protein

Gene

>AfisC3G08655
ATGAATTCTTTGCAGATTTCCCACGCTTTTCTCATTCTTTTTGCCTTCATCTTGATCATACAACCATCCAAAATCTCTTCACAAAACCCATCTCCTTCTCAAATCAGAACCATCTTCCGACTTCAGAAAATCCTCGAATATCCATCTTCTCTATCAAATCTAAACAACATAGCAAACATCTGCTACTTACCATATTCGAAATCATTATCAATCTCCTGTTATGGCACAAGAATAACTCAACTTAGCGTACTGGGTAACAGTACAACTCCACTATCATCCTCATTCTCCATTGATTCTCTCTTCACTACACTCTCCAGACTTCCGAGTCTCACTTCTCTTTCTCTTGTCTCTCTTGGCATACATGGCCCGCTACCCGATAAGCTTCATCGCCTTTCCGCACTTAAAGTTATCAACTTGAGCTCAAATTACATTAATGGTGCCATCCCAAATGTTATTTCTTCGATGACTAGCCTTGAAAGCATTGTTCTAAGTAGCAACAAGTTCAATGGAACAGTTCCCAGCCTTAAGAGTTTGACATCTCTTAAAGAGCTAGACTTAAAAGGGAACAACCTCCGTGGTGATGTTCCTTCATATTTGTTCTCAAAGCCATTGATTCAACGCTTGGATTTATCGAAAAATCGATTTACAGGAGCTTTTCCAGGAAGACTTTCTTGTAGCAAAAGTTTAGAATTTGTAGATATTTCTAGCAATTTTTTAGTGGGTGAATTGCCATCTTGTTTAAGTTCGAACTCGTCGACAAGAGTAGTGTTGAATTCATGGAACTGCCTCAATTCTAAGTACCAACACATGAAGTCTTTCTGTAGCAGAGATCCACTGGCTGCAGTTTTGCCTCCTATGAAGAAAACACAGGGGTCCAAGAGCAAAACTGGTTTAATACTAGCTATTGTAGGAGGAGTTATTGGTAGTGCAGCAGTGTTGCTTCTGCTGTTGTTCTTCATCATGAGGTCAAAATCAAGAAAAATGGACTTTAGCAAATCAAAACATGTTCAAGTTAAAACTCCAGTTTACGCGTCTCCAAGGACAGCTGCAGACACAAGTAAGTTGAATTTAAGAATGTTTACATATACAAGGAAGATCATAAAGAATGATGATGGTATGTGTACTTGTATTTGTAGGACATATGTCCCAAGCAGTGAGGATAGGTACACATGGGCTAACCCCATACCGCGTATTTTCTATGGATGAACTTGAAGAAGCTACTAATTCATTTGATCCATCAAATTTAATTTTCGATGGCCCTCAGGGACAGGTACTAGTCTCATCAAGACATCAACATAAAGCAATAAATATGTGCTTTTCCAACGTTGTAAAGGTTATTATTATTTTTGTTATTTTTCATACGTTTTCAGTGCTATAAAGGGTGGATCAGAGATGGATCTGCAGTTGTTGCGAGAGGTATGAAGCTAAAACAAAAGATATCACCTCAGAACTTAAGTCAATACATGGATGTGATATCAAAACTAAGGCATATCAACTTGGTAAGCATTCTTGGTCATTGCATTCCCAATGGTCAAGATCATAATGGCTTTGTCAATGACACCATCTTCATAGTTGCTGAGCATGTTTCTAATGGAAATTTAAGGAGCCATCTTACTGGTATGGTGTTCAAAAATATCAGATTAAATGCTCTATTAGTAGTTTAATACACTCTGGTGCTAGATACTCATGTGTGTGTGTATAATTTCAGATTGGAGGAAGAGAGAGATGCTGAAATGGCCACAGAGAGTATCGGCAGTCATAGGAGTTGCAAGAGGAATACAATTTTTACATACAGTAACAGTTCCAGGCATTTTTGGTAATGATCTTCGAATTGAGAATATATTGGTTGATCAAACTCTTACAGCCAAAATCAGCAACTACAATCTACCGGTACTACTGAACAACAAGAACAAGAAGGTAAGCACAACACTTAGATTAAAGATTTTCAACCCATTTGAAAGTATATTCAAAACATGAATGTTTTCAGGTTGGTTCAGAAAGCCCATTTGGAAAACTAGACAACAATGACAATGGAAGGTAATTTCTTTTCCATACTTCCATAACAATCATTTGTTCAATAATTAGCAGTATAATAAGGTATTAGTGTTTCATTTTTTTAGTTATCCAAATATGGAAAATGGCGAAAAGGACGATGTGTATCAGCTTGGCCTCATCCTACTAGAAGTAATTACAGGCAAGCCAAATGGATCAAAAGATCAACTGGAAGCATTAAAAACCAAGGTATTTAATAAGAATATGCATCACGGTACATATATATATCATCTTTAGTACAAAGTATAATGTCCGAAACGCGTGTATATATGCAGCTGCAAGATTGCTTAACTGATGATGAAAGAGGAATAAGGCTGAAAGAGGTAACGGACCCTACTATTCGTGGCACCTTTGCAGTAGACGCGATGCGCACGTTAATTGCAGTGACATTAAATTGTGTTGCTAAAGATCATAGAGAAAGGCCATCCATCGATGATATATTATGGAATTTGCAGTACTCAGTTCAAATTCAAGATGGCTGGACAAGTAGTGATAGCCTTAGTGTTCATTCATATCAGCCCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250614.1	1.9e-171	probable LRR receptor-like serine/threonine-protein kinase At1g14390
Swissprot	Q9M9S4.1	1.0e-100	Probable LRR receptor-like serine/threonine-protein kinase At1g14390
trEMBL	A0A5P1EKL9	1.9e-160	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G14390.1	42.60	7e-154	541		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08655	AT1G14390.1	723	322	13	33	674	32	742	42.60	7e-154	541
AfisC3G08655	AT2G02780.1	709	335	14	33	669	32	729	41.04	8e-130	461
AfisC3G08655	AT3G03770.2	723	354	15	47	666	43	758	35.82	3e-118	423

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13855.3	LRR_8	Repeat	108	168	30.7	1.8e-07
PF07714.14	Pkinase_Tyr	Domain	411	653	63.6	1.5e-17

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001558	P	regulation of cell growth
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0007166	P	cell surface receptor signaling pathway
GO:0009741	P	response to brassinosteroid
GO:0009755	P	hormone-mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0009856	P	pollination
GO:0044425	C	membrane part
GO:0044444	C	cytoplasmic part
GO:0044702	P	single organism reproductive process
GO:0048364	P	root development
GO:0048468	P	cell development
GO:0071396	P	cellular response to lipid
GO:1901701	P	cellular response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network