result

Gene information

Detail information of AfisC3G08728

Location

Gene	Chr	Start	End	Strand
AfisC3G08728	chr3	1551394832	1551400082	+

Sequences

CDS

>AfisC3G08728
ATGGAGGAAGAGAAAAGCTCATGGGTGAGAAGAGCAAATTTTTCTCATACTATTTGTCATCGTATAGATTATTCAAAGTTACCTGCTATGCATTTTGATGTAAACTCAACTCACGATCTAGGATCGAAGCCTATAAGTTCAAATGGAAGTCATTCTAAGGGTGCGTCAATCTCATTTCCTCTTAATGATAATTTAAAGCCGGATTCTAAGAATTTAAGCCAAGAGTCCACTACTTTGTTAAAAACTTTGAGTTTAGATTCTTCAATTGGCGCCTCAAACACGGTTTCTACATCAAAATCGAATAAGTTAAGCACTAGCTTGGAAAGATCTAAACCTTCTGGCAATCAACAAGATCGCAAACCAAAGCATCGATCTATCTCCCCTCTTCCTAGAATAAAGATACCTGACACATTTAAAGAAGCTAAAGCTAAAGCTAAACAAAGAAGATATTCAACTCCACCACCTATTAGGAGAGGAGATACAAAAATATTCGAAAAATTGATCTCTAAGGAATCATCTCCTCCACATAAAAGTCCATTGCAAAAGTTCTCATCAATAAAGTCGAACGATAAGAGTAAAAGCAAAAAGGAAAACTTATGGACTAAGTATTTTGATCATGGTGTTGGTAGAGTTATTTCTATGGAAAATACAAAAAAGTGGACGGTTGATCTTTCCAAGTTGTATATCGGTCTTAGATTTGCATCTGGAGCTCATAGTCGTTTATTTCATGGAGTTTATAATGACGAAGCGGTGGCTGTGAAAATAATTAGGCAACCTGATGATGACGAAAATGGTGTAATGGGTGCTCAGTTGGAGAAGGAATTTAGTAGAGAAGTTAACTTTCTTTCTCACTTGTATCACCCTAACGTGATAAAGCTCACAGCAGCGTGTAGAGATCCACCGGTCTTTTTCATCATAACGGAATACTTATCTGGTGGGTCCCTAAGATCTTTTCTACACAAACTTGAACATAAAACCCTTTCACTAGAGAAAATAATCCATATTGCCTTAGAAATTGCAAGAGGAATGGAATATATTCATTCTCAAGGGGTTATCCATCGCGATTTGAAGCCAGAAAACATTCTTTTTGATGAGGACTTCTGTGTAAAAATAGCTGATTTTGGCATTGCTTGTGAGGATGCATATTGTGATGTACTGGCAGAAGATACAGGAACTTTTAGGTGGATGGCTCCTGAAATGATAAAACATAAACCATATGGGAGGAAAGTGGATGTGTACAGTTTCGGTTTAGTTTTGTGGGAGATGGTGACTGGGAGAATTCCTTATGAAGAGATGTCGCCTGTCCAGGCAGCATTTGCTGTAGTCGACAAGAATCTGAGGCCGGTGATCCCAGCTGATTGTTGTCCCTCATTGAGGGCGTTAATAGAGCAATGCTGGGCATTGAACCCGAGCAAAAGACCTGAATTTTGGCAAATCGTGAAGGTTTTCGAGCATTTTGAGTCTTCTTTCGATCAAGATGCCACACTTCATTTTGTTCAAAGCTTGGCGCGTCACGAAAACAAGAAGGGGCTTTCCAACTGGTTTCAGAAACTTAAATCTTCTCATGCGAGTGGTTCCATTGTTCCCATTCCCAAATTGCCCTAA

Protein

Gene

>AfisC3G08728
CCGAAATAAAGCGTGACTTTATCGTGGTGCTCAAAATGACATAGACAATCCCAGAGGAAAATACAATTAAATCAGAATCATATGCAAAATAAATCAAATTCATATGCAAAATATTTCGTACCGAAACCGTATTGATAGCTTCTCCAATCCACCAAAAAGGAAATTCCGTACCACTAATAGCTCCATTTTCTCAATTGTGCGCAAAGAGGAAGAGGTGGCTTTTCTCGGTATGCTATTTTTTTTAAACATTTTTCATAATGTTATAGTTTAGATCTTGGCTAAATATTTGATCATGAAGAAGAAATACTCTTCATTCCTTTCGCCAATTTTCAACTGATTTGTAATGAAGGGGAAAATTTGATTTGGTTTTAATGTCAAATTCATGCTTTTGGTTAAAATGAAATGTTTATGTGGTTTCCATATCTTCTGCTTGGTATTAATTTCTTCTGATCTATTGTAAAAGAGATTTGATCCGCTTATCAACTCTCTTTTGAATTGCTGTTGCAGGACACGCGCTTTCTTTGTTCACAAGATGGGATTCATCTTGTGAAGCTTATATCTGATAATCGTACAGTTTGAGGAATTATTTTTGCTTTGTGTGCTAAAACCGAATCAAATGTTTTCTAGGTAAAGGGTACGTTGTGGATGGAATTGCTTTTAGAAAAATTAGTTTTTGACAGATAATGATGTTTATTCAGAAATTTCCAGTATGTACAATGGGTTTAGTTTATTGTAGTTAGTCGAATCATCACAACTGTTTAGTAATATACATTTTAAAAGCAATGGAGGAAGAGAAAAGCTCATGGGTGAGAAGAGCAAATTTTTCTCATACTATTTGTCATCGTATAGATTATTCAAAGTTACCTGCTATGCATTTTGATGTAAACTCAACTCACGATCTAGGATCGAAGCCTATAAGTTCAAATGGAAGTCATTCTAAGGGTGCGTCAATCTCATTTCCTCTTAATGATAATTTAAAGCCGGATTCTAAGAATTTAAGCCAAGAGTCCACTACTTTGTTAAAAACTTTGAGTTTAGATTCTTCAATTGGCGCCTCAAACACGGTTTCTACATCAAAATCGAATAAGTTAAGCACTAGCTTGGAAAGATCTAAACCTTCTGGCAATCAACAAGATCGCAAACCAAAGCATCGATCTATCTCCCCTCTTCCTAGAATAAAGATACCTGACACATTTAAAGAAGCTAAAGCTAAAGCTAAACAAAGAAGATATTCAACTCCACCACCTATTAGGAGAGGAGATACAAAAATATTCGAAAAATTGATCTCTAAGGAATCATCTCCTCCACATAAAAGTCCATTGCAAAAGTTCTCATCAATAAAGTCGAACGATAAGAGTAAAAGCAAAAAGGAAAACTTATGGACTAAGTATTTTGATCATGGTGTTGGTAGAGTTATTTCTATGGAAAATACAAAAAAGTGGACGGTTGATCTTTCCAAGTTGTATATCGGTCTTAGATTTGCATCTGGAGCTCATAGTCGTTTATTTCATGGAGTTTATAATGACGAAGCGGTGGCTGTGAAAATAATTAGGCAACCTGATGATGACGAAAATGGTGTAATGGGTGCTCAGTTGGAGAAGGAATTTAGTAGAGAAGTTAACTTTCTTTCTCACTTGTATCACCCTAACGTGATAAAGGTATGCTTACTGGTCGTTTTATACCATCTATTATTCAAGCCTGCATTTATATTAAATAGTTTATTGTGAAAAGGATGGTGTTTTTTCACTATTAGCATATATTCTAGCAAATATTTAGCAATACTTTCCATAAGTTATTTCTTTTTTTATTTTGGTGAAATATTCCATGGATGAGGATGGTAATAGTACAACATTATTTGAAATGTTCACTTTAATCTATTAGATTTCAGTTAACATAACACAGATAATAGGATCCTAAAATTATGATCTAATGTAAACTTTTGTTTACAAATGATGGCCTTGTACATCATCATAATAATATATTTCTGTAGCATAGACACAGTATGGATATACCAGTACAACACGATATGATATGAGAATACAACAAACCTACAAAAACTAAAATATGGGCATGGTGATCTTTTATTTATCTATTTATTAGTATATGATTAAATAAACTTAAACCTGTCTTAAAACCCATAAATCAATATTTTGAACAATAAAATAAAATCCAACATGTAACACTGGGATGCAACCTAATGACTTCTGTATGAGTATCTTAGTTGGCATAATAGGACAGATCCTTGTGTGTCCCCATTCATCACAAGTGTTAACATATCCTCTAACTGGTTAGCTATTAAGTATCATGTAGCAGTTAAGTATATTTCTAAATAATAGTTCATACCAACAATCTTTGTTTATCGTTTATGATTATATATCTTTGTATAATACAGCTCACAGCAGCGTGTAGAGATCCACCGGTCTTTTTCATCATAACGGAATACTTATCTGGTGGGTCCCTAAGATCTTTTCTACACAAACTTGAACATAAAACCCTTTCACTAGAGAAAATAATCCATATTGCCTTAGAAATTGCAAGAGGAATGGAATATATTCATTCTCAAGGGGTTATCCATCGCGATTTGAAGCCAGAAAACATTCTTTTTGATGAGGACTTCTGTGTAAAAATAGCTGATTTTGGCATTGCTTGTGAGGATGCATATTGTGATGTACTGGCAGAAGATACAGGAACTTTTAGGTGGATGGCTCCTGAAATGATAAAACATAAACCATATGGGAGGAAAGTGGATGTGTACAGTTTCGGTTTAGTTTTGTGGGAGATGGTGACTGGGAGAATTCCTTATGAAGAGATGTCGCCTGTCCAGGCAGCATTTGCTGTAGTCGACAAGGTATATCATTCTGTTTATCAAATTCATCTACTTTTACAAAAAGGGCTTTGAGAATCAAATCTCTGTTTTTCATGCAGTTGTATGAAAAGTCTGCTGAATTTGTAAATCTGGTCTAAAATAGAAAGTGCAAAGCTAAATTGTGTTTTCCCACTAATAAGCACAAGTTAACTTTTGCTTTCTGTGCAGTTCTTCAAAAATTTAAAAATCAAATTTTGTTAGTTGTGAACAATTATAATTGTTGTTTGAATATAGTTTTATCAAATGACTTCATTTTTTTACCATGATCAAATTGTATATGATTTTTGACAAACTTTCCGAAAAAAATGCAAGTTAGCCTGCGTTTTTTTATTAGAAAAGACACAAGTTAGCATGCGCTTTTTGGTTTTCAAAAAATAGAGACTTAATTTACGTATTCATTGTTGTATGAACTTTTTTATAACAACATTTTCATTAGTGATCTGTAACCTTTTTTTTTTCTGTTTACTAAATATAGTCCAAATGTATTTAATGCATCAAATTATTAATAAAATGAGAATGTGAAAATGACACAAATAGTCATCTTTATCTGCCATTGAGATTATGTTCCACTTCACACTTGCGAATATATAAATATATATAATACATAATTCAATCATGTACCAAGTCAAATTTAAGCTTTTGTTTTTGAGAGATCTCGGTGGTGTTTGATGTGTCAGTTAGTATTTATATATCAAGTCTATTGTGTAATTAGTTGACATGAGACTATACTAATCATATGGGTGTTATAAATTATGTGAAAGTACAGTTTTCCAGATCATAGACAATCTAGCACTCTAAATTGTCAACCAAGTATTTTTGGCTTTCTAAGGATATTTTGTACACAAATTCATTCGAAAAGTATATTTCAACTCACACATGTTAAATTACGTGATTATTTGGTTGTTTGTCCACGACAAAAATGGGCTAAAGAAATTTTTTATTTTCTTATGACAAGTGTTTTTTTTTTCTATTGTTATTTATTTATCTTCTTTTTGTCAAAGCTTTTATTCTTTGACCTTGTGCTATAGCCTATCAAAGTATATATATTTCTCCTCATTATCGTTGGCTATGTATCAGAACGAAAACTTGTTATATCAAATGGTGAATTGCATAATTGTTAATTCTTCATTTGTTTAACAATTGTCGTTAGTAGTTTTACCAGTACTGGTGCATGTGCATATAAGCAACACACTAATTACCTTCTATCAACTTCTTAACTATCTATTTATAGATTTAATATGACAAAAATACCCGCTTTAGAATTTGGGTGTAGGTCAAGAGGTTTTAATGAGCTGGTGCTAACTAGATCAACCCAAGTTATATAGTAACCCTTTATTTGTCTTTTGGGTTATTTCATTCTTATTTTAGTTCTGAAGTTTGAAATGTGTGGGTGAAGTTGGAATCTTTGACCAGCTTAATAATATGGTTACCTAGATTGCGATGTTTGTACAATAAGATGGAGTTTTGGTGGTTAAATGATTGTTCATTCTAAATATACTTGTCTAGGAGTGTTTTTATAATGTAATGTAATAAAAATTGCAAACTTAAACAGAGCAAAAAAGTACAGCACAAATTTTATTTCAACTTTAGGTCCAATTCAAAACTAATTACAAAAGTCGGTCTTTTTTTTCTTATATCGACGGTTTGCACTTGCACAATTTTTATAATACACAGACTTGCGCATTTTCAAACTGCGCAAAAACAAATTGAAATTTTGTGCTTGCACACTTTAAATTTGCACAAATATAAATCCTGCCTTGGTGAAAACCAAACCTAACTTTGTAATAAGTTTTGAAGATGATCTAAAGTTGGAATAGGTTTTTTTCTCGGGTCTATAAATAAAACTTGTTCAAAATAATAATATAGTCTACCTATTTCATGCCCATTTTATATTTTATGTCGTAAACCATGTATTCACTATAAAAAATACCGTTCTTAATTCTATTATGGAAAACATGTTAATATTTCAGAATCTGAGGCCGGTGATCCCAGCTGATTGTTGTCCCTCATTGAGGGCGTTAATAGAGCAATGCTGGGCATTGAACCCGAGCAAAAGACCTGAATTTTGGCAAATCGTGAAGGTTTTCGAGCATTTTGAGTCTTCTTTCGATCAAGATGCCACACTTCATTTTGTTCAAAGCTTGGCGCGTCACGAAAACAAGAAGGGGCTTTCCAACTGGTTTCAGAAACTTAAATCTTCTCATGCGAGTGGTTCCATTGTTCCCATTCCCAAATTGCCCTAAGTTGTTAAAATAGTTTGTTCCTGCTGTAATTATTTTATGTTATAAATTTTAGTCCCTGTGAGGATAAGAAGAAGAAGAAGCATTTCTTTATTAACTTTTCTTCTTCATGTAAGATGAGTCATTCTGTTGTTGCCAAAGTATT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245339.1	3.0e-188	serine/threonine-protein kinase HT1
Swissprot	Q2MHE4.1	4.1e-89	High leaf temperature protein 1
trEMBL	A0A5P1FQA4	2.2e-188	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G58950.1	49.34	2e-143	506		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08728	AT5G58950.1	531	233	5	1	523	1	503	49.34	2e-143	506
AfisC3G08728	AT3G46930.1	455	211	8	85	516	5	448	46.15	7e-102	368
AfisC3G08728	AT1G62400.1	287	132	1	218	504	32	316	53.31	2e-92	336

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	233	482	212.0	8.3e-63

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000077	P	DNA damage checkpoint
GO:0005515	F	protein binding
GO:0000287	F	magnesium ion binding
GO:0001666	P	response to hypoxia
GO:0002229	P	defense response to oomycetes
GO:0007010	P	cytoskeleton organization
GO:0005829	C	cytosol
GO:0004709	F	MAP kinase kinase kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0005769	C	early endosome
GO:0005789	C	endoplasmic reticulum membrane
GO:0005802	C	trans-Golgi network
GO:0007050	P	cell cycle arrest
GO:0007257	P	activation of JUN kinase activity
GO:0009314	P	response to radiation
GO:0009414	P	response to water deprivation
GO:0009658	P	chloroplast organization
GO:0009686	P	gibberellin biosynthetic process
GO:0009723	P	response to ethylene
GO:0009744	P	response to sucrose
GO:0009750	P	response to fructose
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0010119	P	regulation of stomatal movement
GO:0012510	C	trans-Golgi network transport vesicle membrane
GO:0018193	P	peptidyl-amino acid modification
GO:0043005	C	neuron projection
GO:0042733	P	embryonic digit morphogenesis
GO:0043065	P	positive regulation of apoptotic process
GO:0044822	F	poly(A) RNA binding
GO:0046777	P	protein autophosphorylation
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0071281	P	cellular response to iron ion
GO:1900150	P	regulation of defense response to fungus
GO:1900424	P	regulation of defense response to bacterium
GO:2000031	P	regulation of salicylic acid mediated signaling pathway
GO:2000035	P	regulation of stem cell division
GO:2000069	P	regulation of post-embryonic root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network