result

Gene information

Detail information of AfisC3G08739

Location

Gene	Chr	Start	End	Strand
AfisC3G08739	chr3	1553408266	1553412132	+

Sequences

CDS

>AfisC3G08739
ATGGCTAAAGCCATTCCTCCACTCATCTTCACACTCATCACCTCCTTCTTCTTCTCAATTCATTCTCAATCCGAGCAACAAATCCTCCTCCAAATAAAACAAGACTTTGGAAATCCAAACTCACTTCAATCATGGAATACTTCAACCCATCACTGCAGCTGGACTGGTGTCTCATGTTCCTCGAACCATGTAACCAGCATCACCTTATCCAACTCCGGCCTTCAAGAACCAATTCCTGATTCAATCTGTAAACTCACAAATCTCTCATATCTCGATCTTTCTTATAACAACATTATTGGTTCATTCCCTACAACTCTCTACAACTGTACAAACTTAGAGCATCTTGATGTATCTCAAAATCGCTTTGTGGGCACCGTTCCGGTTTCAGTTAATCGGTTATCAAAGAAACTTACGTATCTGAGCCTTTCTGCTAACAATTTTACGGGTAATATACCAGCTTCCATTTCTGATATTACTTCACTGCAGTACCTTCTTCTTGATAGCAATCTTTTCAATGGCACTTTTCCTGCTGAGTTTGGCAATTTGATCAACTTGAAACAACTTTGGTTATCTTATAATCCGTTTAAGCCATCGAAAATACCAGAAGATTTCGGTAACATGTTAAGTTTGACTTATTTATGGATGTCTTACACGAATATTTATGGTGAAATACCTGATTCTTTTTCGAAGTTGTCCAATCTTGTTCATTTGGATTTGACTTCAAACTCTTTGTATGGTGAAATCCCTGCTGGGATTTGGATGTTACCGAATCTCGAACTTCTTTATTTGTACAATAATCAATTGTCCGGAGAGATTAACAAGAGTATAGGAGCGAAAAATTTGATCGAAATCGATGTTTCTATGAATAATATAACTGGTTCTATTCCAGTCGGCTTTGGACATCTGAAGAATTTAACTGTTCTTTTCTTGTACATGAATCAACTTAGTGGAGAAATACCTGAAGACATCGGGGTTCTCCCTTTCCTCGTTGATCTTCGAATTTTTAACAACAATTTGGTAGGAAAATTGCCTTCTGAATTAGGAAAACATTCGAAACTTGGAAATCTTGAAGTATGTTTCAACTCCCTTTCAGGTGAAATACCCGAGTTTCTTTGTGCACAGGGTAATTTTTCATCATTAGTTCTTTCCAACAATGAATTTACAGGCAGTTTGCCTTCGTTTATCGGTAACTGTCCTACTCTTAACAACATCATGCTCGAAAACAACAGATTATCTGGTGAAATTCCAGGAACTTTATGGTCTACTGCACTGAATTTAACCACTGTATACATGCATCACAATTCATTCACAGGAGTTTTACCTGCAAATTTGCCATGGAATCTTACCAGACTCGAGATTCAGTTTAACAGATTTTCTGGTTCGATTCCTTCATCAGCACAAAATTTGAATGTGTTTAAAGCTAGTAACAACTTGTTTTCAGGATATATCCCAGAAAATCTTGCAAAACTTTCTAGGCTGCAGGTTCTTGACATAAGTAGTAATGATATCTCTGGTGAAATTTCAAGCTCTATATCCTCGTTAAAGTATCTGACTGAGTTCAATGCAAGTATGAATCGATTATCAGGTGAAGTTCCTGAAACAATTGGTTCATTACCAGTGCTTACTATCCTCGATTTATCGAAAAACCAGTTGCATGGCTCGATTCCAAATTCGATGAGTAACTTAAAGCTCAATGTCTTAAACTTATCCTTCAATGATCTTACTGGTGAAATTCCAATATCTTTACAAAATCAAGTGTACGATGAGAGCTTTCTATCTAATCCAAATCTTTGTGCCTCAAGTCCATTTTTCAAACTTCATAGTTGCAATAGTAAAGCTTTGAGTTCGCACAATCTCTCTACTGGATTGCTCGTCGCTTTCATAATACTCGGTGTGTTCTTCTTCATTTGTACAAGTATATTAGGACTATTCATGTTGAAAGAGTATAGAAAAAGGAAAAACGACCTTAATACATGGAAAACAACTTCTTTCCATCTAGGCGAGTTCAATGAGATGAACATTGTGAAGCAACTTACTAATGAAAACTTAATCGGTAGTGGAGGTTCAGGGTTGATATACAAGGTATCTCTTCGAAATAGGACTGAAGATACATTAGCGGTGAAAAAGATATGGAATAGTAGAAAGCTAGACTCTAACTTAGAAAAAGAGTTCGAGGCAGAAGTTCAAATTCTAGGCTCGATTCGACATGCAAATATAGTGAAGCTATATTGTTGCATATCGAGTTCGACCTCTAAGTTGCTTGTATATGAATATATGGAGAACGAGAGCCTTGATAGGTGGCTTCATTCAAGAAATTCAATGAGAAGTGCATTGAACTGGCAAACAAGGCTGTCTATTGCCATAGGTGCTGCAAAGGGCTTGTGTTACATGCATCATGATTGTAGTCCACCTATCGTGCATAGAGACGTGAAGTCTAGTAATATTTTGTTAGATTCAGAGTTTAATGCAAAAATTGCCGATTTTGGTCTGGCTCGGATGATGGTCAATGCTGGTGATCCTCAGTCTGTTTCTGCTGTTGCTGGTTCTTTTGGTTACATGGCTCCAGAATGTGGATTGCTGAGAAAAGTGAACGAGAAAGTGGATGTTTATAGCTTTGGGGTAGTTCTTCTAGAGCTAACGACTGGTCGAGAAGCCAACTACGGGGATGAGAACAGTTGCCTTTCAGACTGGGCATGGCGGAAGATTCTAGAACATGCCAGTATCGAGGAAGTAGTAGATGTAGAAATTAGGGACCCGTTATGGGTTGAAGATATCGAGGTTGTGTTCAGATTAGGAGTTATATGCACCAATGCATCACCGGCTAGTCGTCCTACTATGAAGGAAGTATGCCAAGTGCTACAAAGATGCGATAGGAGTAAGGAGAATGGAGTTGAAGGGAAAGAAAGAGTTAGAGAGCGAGATGGGGCTCCTTTGATTGGAGATAAATGGGGTAGTGGTAGGAGTGATGATGATTATTATAGACCGACTTCCCTCTCCATTGAAGAAACTGAAGAAAGCTTGACCGATGCTTTTTGCTGGGTGGATAAGAAATAG

Protein

>AfisC3G08739
MAKAIPPLIFTLITSFFFSIHSQSEQQILLQIKQDFGNPNSLQSWNTSTHHCSWTGVSCSSNHVTSITLSNSGLQEPIPDSICKLTNLSYLDLSYNNIIGSFPTTLYNCTNLEHLDVSQNRFVGTVPVSVNRLSKKLTYLSLSANNFTGNIPASISDITSLQYLLLDSNLFNGTFPAEFGNLINLKQLWLSYNPFKPSKIPEDFGNMLSLTYLWMSYTNIYGEIPDSFSKLSNLVHLDLTSNSLYGEIPAGIWMLPNLELLYLYNNQLSGEINKSIGAKNLIEIDVSMNNITGSIPVGFGHLKNLTVLFLYMNQLSGEIPEDIGVLPFLVDLRIFNNNLVGKLPSELGKHSKLGNLEVCFNSLSGEIPEFLCAQGNFSSLVLSNNEFTGSLPSFIGNCPTLNNIMLENNRLSGEIPGTLWSTALNLTTVYMHHNSFTGVLPANLPWNLTRLEIQFNRFSGSIPSSAQNLNVFKASNNLFSGYIPENLAKLSRLQVLDISSNDISGEISSSISSLKYLTEFNASMNRLSGEVPETIGSLPVLTILDLSKNQLHGSIPNSMSNLKLNVLNLSFNDLTGEIPISLQNQVYDESFLSNPNLCASSPFFKLHSCNSKALSSHNLSTGLLVAFIILGVFFFICTSILGLFMLKEYRKRKNDLNTWKTTSFHLGEFNEMNIVKQLTNENLIGSGGSGLIYKVSLRNRTEDTLAVKKIWNSRKLDSNLEKEFEAEVQILGSIRHANIVKLYCCISSSTSKLLVYEYMENESLDRWLHSRNSMRSALNWQTRLSIAIGAAKGLCYMHHDCSPPIVHRDVKSSNILLDSEFNAKIADFGLARMMVNAGDPQSVSAVAGSFGYMAPECGLLRKVNEKVDVYSFGVVLLELTTGREANYGDENSCLSDWAWRKILEHASIEEVVDVEIRDPLWVEDIEVVFRLGVICTNASPASRPTMKEVCQVLQRCDRSKENGVEGKERVRERDGAPLIGDKWGSGRSDDDYYRPTSLSIEETEESLTDAFCWVDKK

Gene

>AfisC3G08739
ATGGCTAAAGCCATTCCTCCACTCATCTTCACACTCATCACCTCCTTCTTCTTCTCAATTCATTCTCAATCCGAGCAACAAATCCTCCTCCAAATAAAACAAGACTTTGGAAATCCAAACTCACTTCAATCATGGAATACTTCAACCCATCACTGCAGCTGGACTGGTGTCTCATGTTCCTCGAACCATGTAACCAGCATCACCTTATCCAACTCCGGCCTTCAAGAACCAATTCCTGATTCAATCTGTAAACTCACAAATCTCTCATATCTCGATCTTTCTTATAACAACATTATTGGTTCATTCCCTACAACTCTCTACAACTGTACAAACTTAGAGCATCTTGATGTATCTCAAAATCGCTTTGTGGGCACCGTTCCGGTTTCAGTTAATCGGTTATCAAAGAAACTTACGTATCTGAGCCTTTCTGCTAACAATTTTACGGGTAATATACCAGCTTCCATTTCTGATATTACTTCACTGCAGTACCTTCTTCTTGATAGCAATCTTTTCAATGGCACTTTTCCTGCTGAGTTTGGCAATTTGATCAACTTGAAACAACTTTGGTTATCTTATAATCCGTTTAAGCCATCGAAAATACCAGAAGATTTCGGTAACATGTTAAGTTTGACTTATTTATGGATGTCTTACACGAATATTTATGGTGAAATACCTGATTCTTTTTCGAAGTTGTCCAATCTTGTTCATTTGGATTTGACTTCAAACTCTTTGTATGGTGAAATCCCTGCTGGGATTTGGATGTTACCGAATCTCGAACTTCTTTATTTGTACAATAATCAATTGTCCGGAGAGATTAACAAGAGTATAGGAGCGAAAAATTTGATCGAAATCGATGTTTCTATGAATAATATAACTGGTTCTATTCCAGTCGGCTTTGGACATCTGAAGAATTTAACTGTTCTTTTCTTGTACATGAATCAACTTAGTGGAGAAATACCTGAAGACATCGGGGTTCTCCCTTTCCTCGTTGATCTTCGAATTTTTAACAACAATTTGGTAGGAAAATTGCCTTCTGAATTAGGAAAACATTCGAAACTTGGAAATCTTGAAGTATGTTTCAACTCCCTTTCAGGTGAAATACCCGAGTTTCTTTGTGCACAGGGTAATTTTTCATCATTAGTTCTTTCCAACAATGAATTTACAGGCAGTTTGCCTTCGTTTATCGGTAACTGTCCTACTCTTAACAACATCATGCTCGAAAACAACAGATTATCTGGTGAAATTCCAGGAACTTTATGGTCTACTGCACTGAATTTAACCACTGTATACATGCATCACAATTCATTCACAGGAGTTTTACCTGCAAATTTGCCATGGAATCTTACCAGACTCGAGATTCAGTTTAACAGATTTTCTGGTTCGATTCCTTCATCAGCACAAAATTTGAATGTGTTTAAAGCTAGTAACAACTTGTTTTCAGGATATATCCCAGAAAATCTTGCAAAACTTTCTAGGCTGCAGGTTCTTGACATAAGTAGTAATGATATCTCTGGTGAAATTTCAAGCTCTATATCCTCGTTAAAGTATCTGACTGAGTTCAATGCAAGTATGAATCGATTATCAGGTGAAGTTCCTGAAACAATTGGTTCATTACCAGTGCTTACTATCCTCGATTTATCGAAAAACCAGTTGCATGGCTCGATTCCAAATTCGATGAGTAACTTAAAGCTCAATGTCTTAAACTTATCCTTCAATGATCTTACTGGTGAAATTCCAATATCTTTACAAAATCAAGTGTACGATGAGAGCTTTCTATCTAATCCAAATCTTTGTGCCTCAAGTCCATTTTTCAAACTTCATAGTTGCAATAGTAAAGCTTTGAGTTCGCACAATCTCTCTACTGGATTGCTCGTCGCTTTCATAATACTCGGTGTGTTCTTCTTCATTTGTACAAGTATATTAGGACTATTCATGTTGAAAGAGTATAGAAAAAGGAAAAACGACCTTAATACATGGAAAACAACTTCTTTCCATCTAGGCGAGTTCAATGAGATGAACATTGTGAAGCAACTTACTAATGAAAACTTAATCGGTAGTGGAGGTTCAGGGTTGATATACAAGGTATCTCTTCGAAATAGGACTGAAGATACATTAGCGGTGAAAAAGATATGGAATAGTAGAAAGCTAGACTCTAACTTAGAAAAAGAGTTCGAGGCAGAAGTTCAAATTCTAGGCTCGATTCGACATGCAAATATAGTGAAGCTATATTGTTGCATATCGAGTTCGACCTCTAAGTTGCTTGTATATGAATATATGGAGAACGAGAGCCTTGATAGGTGGCTTCATTCAAGAAATTCAATGAGAAGTGCATTGAACTGGCAAACAAGGCTGTCTATTGCCATAGGTGCTGCAAAGGGCTTGTGTTACATGCATCATGATTGTAGTCCACCTATCGTGCATAGAGACGTGAAGTCTAGTAATATTTTGTTAGATTCAGAGTTTAATGCAAAAATTGCCGATTTTGGTCTGGCTCGGATGATGGTCAATGCTGGTGATCCTCAGTCTGTTTCTGCTGTTGCTGGTTCTTTTGGTTACATGGCTCCAGGTATGTTTTCTTTCTTTCTTTGTTTTTCTTTTTCCATTTTTGTTTTAAAAACAACAAAATAGGAAAAAACCCATGAATGTTGACCGTTATAGATCAAAATCTAAAAGCTTTTAACCAATCATATACTGCTTGTTATAAAATCATTAGCTCTTTTTTGTTCTAATGGCAGTTATTTTCCTACTATTTCCAAAACCAAATTTGCCAATCCTATCGGTTTAGGCACATATATATGATACTCTTTAATGGCTTAAACCACCATTTTTTTTTACATGTATCAGAACAGTTGATTCAAATCTCTAGGAGTGTTTGTAGCCGTCTAACAACTAATAGTATGAATTGCAGAATGTGGATTGCTGAGAAAAGTGAACGAGAAAGTGGATGTTTATAGCTTTGGGGTAGTTCTTCTAGAGCTAACGACTGGTCGAGAAGCCAACTACGGGGATGAGAACAGTTGCCTTTCAGACTGGGCATGGCGGAAGATTCTAGAACATGCCAGTATCGAGGAAGTAGTAGATGTAGAAATTAGGGACCCGTTATGGGTTGAAGATATCGAGGTTGTGTTCAGATTAGGAGTTATATGCACCAATGCATCACCGGCTAGTCGTCCTACTATGAAGGAAGTATGCCAAGTGCTACAAAGATGCGATAGGAGTAAGGAGAATGGAGTTGAAGGGAAAGAAAGAGTTAGAGAGCGAGATGGGGCTCCTTTGATTGGAGATAAATGGGGTAGTGGTAGGAGTGATGATGATTATTATGTATGAGTTCTGAGCCATGCTTATCACTGGGTTCGGAATTAGTCGTAATCTCTGAACGTGGAAAACAATGAACTAAATTCAGCCTAATTCTATTAGCTCTTTTCCACCCCCTACTATTTTTTTAAAATAATAACGGGCTACTGTACCCTTTAATTGACTAAAGGATAGGTTTTAAAAAAAAAAAATTAAAATTAAAAACGGTGTCAGTGCTTAAACGTTGTTACAACATAAACCATGTCGGCCAACAACTGTGGCAATAACCTCGCTTGGGTTCCATGCTGCTACAGAACAAATCATGTTACACCTCAATGTGGTAGGAACAAATGCGTGCTATACCCAAACGTTGGAGATAGTTTTTTTTTTCTTTTCCGATCCACAATCAGACGTGTTGGAAATAAAATTAACCGAACAGACACCAATTAAAGAGAACCGAATTAAAATTGAACTGAAATTTATCTTGTTTGTGTTTAGAGACCGACTTCCCTCTCCATTGAAGAAACTGAAGAAAGCTTGACCGATGCTTTTTGCTGGGTGGATAAGAAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269285.1	5.6e-151	receptor-like protein kinase HSL1
Swissprot	C0LGX3.1	8.1e-70	Protein HAESA-LIKE2
trEMBL	A0A5P1ERZ3	8.5e-149	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G25930.1	47.45	0.0	887		Protein kinase family protein with leucine-rich repeat domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC3G08739	AT5G25930.1	980	493	11	14	979	14	985	47.45	887
AfisC3G08739	AT1G28440.1	976	531	22	28	975	22	979	40.88	676
AfisC3G08739	AT4G28490.1	967	523	19	14	955	13	966	41.99	653

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	23	60	40.9	1.7e-10
PF13855.3	LRR_8	Repeat	63	122	34.0	1.6e-08
PF13855.3	LRR_8	Repeat	210	268	27.4	1.9e-06
PF13516.3	LRR_6	Repeat	491	507	11.0	0.33
PF13516.3	LRR_6	Repeat	560	577	10.3	0.54
PF00069.22	Pkinase	Domain	680	951	158.0	2.6e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0001944	P	vasculature development
GO:0005829	C	cytosol
GO:0004672	F	protein kinase activity
GO:0005634	C	nucleus
GO:0005983	P	starch catabolic process
GO:0006351	P	transcription, DNA-templated
GO:0006979	P	response to oxidative stress
GO:0009414	P	response to water deprivation
GO:0009570	C	chloroplast stroma
GO:0009934	P	regulation of meristem structural organization
GO:0009960	P	endosperm development
GO:0010030	P	positive regulation of seed germination
GO:0010051	P	xylem and phloem pattern formation
GO:0010067	P	procambium histogenesis
GO:0010082	P	regulation of root meristem growth
GO:0010089	P	xylem development
GO:0010102	P	lateral root morphogenesis
GO:0010183	P	pollen tube guidance
GO:0010223	P	secondary shoot formation
GO:0010227	P	floral organ abscission
GO:0010468	P	regulation of gene expression
GO:0010480	P	microsporocyte differentiation
GO:0016161	F	beta-amylase activity
GO:0017046	F	peptide hormone binding
GO:0033612	F	receptor serine/threonine kinase binding
GO:0043167	F	ion binding
GO:0043565	F	sequence-specific DNA binding
GO:0043621	F	protein self-association
GO:0045490	P	pectin catabolic process
GO:0046777	P	protein autophosphorylation
GO:0048229	P	gametophyte development
GO:0050794	P	regulation of cellular process
GO:0051301	P	cell division
GO:0090406	C	pollen tube
GO:0090548	P	response to nitrate starvation
GO:1902025	P	nitrate import
GO:2000034	P	regulation of seed maturation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00924	E2.7.1.-; kinase	EC:2.7.1.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network