result

Gene information

Detail information of AfisC3G08820

Location

Gene	Chr	Start	End	Strand
AfisC3G08820	chr3	1570828762	1570830238	-

Sequences

CDS

>AfisC3G08820
ATGCCTAATTGGAATAAGGGACCGCTCCTCGGCCGTGGCTCAACTGCCATCGTCTCCCTCGCTTCCGATCCTATCTCCGGCCAACTCTTCGCCGTCAAATCAACAAGTCTCTCAAATTCCGGATTCCTTCAATATGAAAAGGGCATTCATTCTTCAATCTCTTCTCCACACATAATCTCTTACTTAGGCTCTGATTCAGACGACGAGTTCTACCATCTTTTTCTCGAATACGCCTCTGGTGGATCAATCTCCGACCTCATCAGCAAACAAAAGCTTCATGAATCCGATATTAGATCCTTCGTCAAAGACACTCTGCTCGGACTGAGCCATCTTCATTCCATGAAAATTGCGCACTGCGACATTAAGTGCCAGAATATATTAATCTGCTGCGATGGTAGGGCAAAAATCGCAGATTTAGGCTGTGCGAAATTCATAGACCGTGATGATAAAAAAAGGGCAAAAATGAGGGGAACGCCGATGTTCATGGCTCCAGAGGTGGCCAGAGGCGAAGAGCAAGGGCTGGCGTCAGATGTGTGGGCACTGGGATGCACAGTCGTAGATATGGTAACGGGCAGAGCTCCATGGTCGAATGTCTCAGATGCAGCCTCCCTTCTTTACCGGGTTGGATTCACAGATGATGTGCCTGAAATTCCTGAATGGATTTCGGATTCTGGTAAGGAATTTTTGAGCAAGTGTTTGGTGAAGGATGCTGGTAACAGGGCAACTGTTGATGAGTTGTTGGAGCATCCTTTCTTAACGGGTACGGGTTTGGATACTGGATATAAGCGGGTTACGCCTAAGAGCACACTAGAAAGCAGCGTGTGGGATTCTGTATCAGAAAAAGAAGCGGTTGTTGAGTTTGGATCCGATAGGATATTGGATATGACAGGGTTTGGTGACGGACCCAATTGGAGCTGGGATGACAGTTGGCGAACAGTACGAAATGAAACACTGTTTACTGGTGTTACTGTTGCTGGTAGTGGAGCTGCAGTTAGTGAAGAATTATTAGAGTTTAGATTTGAACATGAAGCAGGCGATTATAATGATGCTAACCGTATGGATGAATACGGTGAAGACGGTGTTGTTGTTTCTGTAAAATGTACAAATAATGAAGAGGTAGAGTGTATTTTAATTGCTAATGACAATATATTTGGTCTGATTGAAATTGTTTCTGCTATGCATGCATTGATTGGTAATGGTTTTGGAATATTATTGTGTACAAGTAACAAAATATTGACAGCTGGGAAGATAAAAAACACGGGAAGATTGGAGAGTCCAATTGCATTTAAACCGGAAGTGTGCGTCTTTTAA

Protein

Gene

>AfisC3G08820
GGCTTTAATACTTAACCAACAAGCATCTGCCTTCCGTTAACCCACCCATCCTCTCACATCTCGACACGTGTCGTCATATTGGACCGCTTCCTCCGTGTATAAATCTATAGCGAGGTTCTGACTTCCGACCTCAAACTCAAATTTATTGCTTAACTAAAACGCAAAAATGCCTAATTGGAATAAGGGACCGCTCCTCGGCCGTGGCTCAACTGCCATCGTCTCCCTCGCTTCCGATCCTATCTCCGGCCAACTCTTCGCCGTCAAATCAACAAGTCTCTCAAATTCCGGATTCCTTCAATATGAAAAGGGCATTCATTCTTCAATCTCTTCTCCACACATAATCTCTTACTTAGGCTCTGATTCAGACGACGAGTTCTACCATCTTTTTCTCGAATACGCCTCTGGTGGATCAATCTCCGACCTCATCAGCAAACAAAAGCTTCATGAATCCGATATTAGATCCTTCGTCAAAGACACTCTGCTCGGACTGAGCCATCTTCATTCCATGAAAATTGCGCACTGCGACATTAAGTGCCAGAATATATTAATCTGCTGCGATGGTAGGGCAAAAATCGCAGATTTAGGCTGTGCGAAATTCATAGACCGTGATGATAAAAAAAGGGCAAAAATGAGGGGAACGCCGATGTTCATGGCTCCAGAGGTGGCCAGAGGCGAAGAGCAAGGGCTGGCGTCAGATGTGTGGGCACTGGGATGCACAGTCGTAGATATGGTAACGGGCAGAGCTCCATGGTCGAATGTCTCAGATGCAGCCTCCCTTCTTTACCGGGTTGGATTCACAGATGATGTGCCTGAAATTCCTGAATGGATTTCGGATTCTGGTAAGGAATTTTTGAGCAAGTGTTTGGTGAAGGATGCTGGTAACAGGGCAACTGTTGATGAGTTGTTGGAGCATCCTTTCTTAACGGGTACGGGTTTGGATACTGGATATAAGCGGGTTACGCCTAAGAGCACACTAGAAAGCAGCGTGTGGGATTCTGTATCAGAAAAAGAAGCGGTTGTTGAGTTTGGATCCGATAGGATATTGGATATGACAGGGTTTGGTGACGGACCCAATTGGAGCTGGGATGACAGTTGGCGAACAGTACGAAATGAAACACTGTTTACTGGTGTTACTGTTGCTGGTAGTGGAGCTGCAGTTAGTGAAGAATTATTAGAGTTTAGATTTGAACATGAAGCAGGCGATTATAATGATGCTAACCGTATGGATGAATACGGTGAAGACGGTGTTGTTGTTTCTGTAAAATGTACAAATAATGAAGAGGTAGAGTGTATTTTAATTGCTAATGACAATATATTTGGTCTGATTGAAATTGTTTCTGCTATGCATGCATTGATTGGTAATGGTTTTGGAATATTATTGTGTACAAGTAACAAAATATTGACAGCTGGGAAGATAAAAAACACGGGAAGATTGGAGAGTCCAATTGCATTTAAACCGGAAGTGTGCGTCTTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010926215.1	1.3e-88	mitogen-activated protein kinase kinase kinase 18
Swissprot	Q9ZVP5.1	7.7e-62	Mitogen-activated protein kinase kinase kinase 18
trEMBL	A0A6I9RGN7	9.4e-89	mitogen-activated protein kinase kinase kinase 18

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G55090.1	45.20	1e-71	267	MAPKKK15	mitogen-activated protein kinase kinase kinase 15

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08820	AT5G55090.1	323	146	9	3	308	5	313	45.20	1e-71	267
AfisC3G08820	AT4G26890.1	345	161	9	3	316	4	342	42.61	2e-70	263
AfisC3G08820	AT1G05100.1	295	146	6	3	281	2	294	44.41	8e-65	244

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	6	252	178.1	1.9e-52

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000919	P	cell plate assembly
GO:0005829	C	cytosol
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0005783	C	endoplasmic reticulum
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0009524	C	phragmoplast
GO:0009793	P	embryo development ending in seed dormancy
GO:0010098	P	suspensor development
GO:0010103	P	stomatal complex morphogenesis
GO:0010229	P	inflorescence development
GO:0019899	F	enzyme binding
GO:0032147	P	activation of protein kinase activity
GO:0032550	F	purine ribonucleoside binding
GO:0032559	F	adenyl ribonucleotide binding
GO:0032991	C	macromolecular complex
GO:0034599	P	cellular response to oxidative stress
GO:0034976	P	response to endoplasmic reticulum stress
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0043065	P	positive regulation of apoptotic process
GO:0043168	F	anion binding
GO:0043232	C	intracellular non-membrane-bounded organelle
GO:0043507	P	positive regulation of JUN kinase activity
GO:0043622	P	cortical microtubule organization
GO:0044446	C	intracellular organelle part
GO:0046777	P	protein autophosphorylation
GO:0048046	C	apoplast
GO:0071323	P	cellular response to chitin
GO:0097193	P	intrinsic apoptotic signaling pathway
GO:1900150	P	regulation of defense response to fungus
GO:2000071	P	regulation of defense response by callose deposition

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20716	MAPKKK17_18; mitogen-activated protein kinase kinase kinase 17/18	EC:-	MAPK signaling pathway - plant	ko04016

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network