result

Gene information

Detail information of AfisC3G08824

Location

Gene	Chr	Start	End	Strand
AfisC3G08824	chr3	1570929035	1570930756	-

Sequences

CDS

>AfisC3G08824
ATGCCTAATTGGAACAAGGGTCCATTCCTCGGCCGCGGCTCAACTGCCATCGTCTCCCTCGCTTCCGATCCTACCTCCGGCCAACTCTTCGCCGTTAAATCAACAAGCCTCTCAAACTCCGGATTCCTTCAATATGAAAAGAGCATTCATTCTTCGATCTCCTCTCCTCACATAATCTCTTACTTAGGATACGATTCAGACGATGACTTCTACAATCTCTTTCTCGAGTACGCCTCTGGCGGGTCCATCTCCGACGTTGTCAGAAAACAGAAGCTTCAGGAATCCGAAATCAGATCCTTCGTGAAAGACATTTCGCTTGGATTGAGTCATCTTCACTCCGTGAAAATCGCCCACTGCGACATTAAATGTCAGAACATACTCATCTGTGGCGCTGGAAGAGCAAAAATCGCAGATTTAGGTTGCGCCAAGTTTATAGACTGTGATAATCAAATTAGAGCAAAATTAAGGGGAACGCCAATGTTCATGGCGCCCGAGGTGGCCAGAGGAGAAGAGCAAGGGCTGGCGTCAGATGTGTGGGCACTCGGATGCACAATCGTAGAAATGGCAACAGGCAGAGCTCCATGGTCGAATGTTTCGGATGCAGCCTCCCTTCTTTACCGGGTTGGATTCACAGATGATCTGCCCGAAATTCCTGATTGGATTTCCGATAGTGGTAAGGACTTTTTGAGAAAGTGTTTGGTGAAGGATGCTGGTAAGAGGTCCAGTGTTGACGAGTTGTTGGAGCATCCTTTCTTAACGGGTACGGGTACGGGTACGGACGGGTACAACCGGGTTACACCAAAGAGTGTACTGGACAATAGCATATGGGATTCGGTATCAGAAAACGAAGCAGTTGCGGATTTCGGATCCAACAGGATTCTAGAATTGATCGGGTTTGGTAATGGACCCGATTGGAGCTGGGATGACAGCTGGCATACACTACGCAATGAATCATTGTTTACTGCTGCTACTGTTGCTAGTACTGCAGCTGCCGTTAGTGAAGAATTATCAGAATTTAGTTCTGAGTCTTTTGATAGCGAATTATGTGATTATAGTGATTCTAAAATGGATATATGTATTGAAGAAACTGTTAATGTTTCTGAAAATTGTACAATTAATGATGATGATGTAGAGTTGATTTTAAGTGCTAATAATATAACTGGTCTGACTGCAAACGATGATTTTTCTATGTATACGTTATTATTATTTGTAGTTTTTAAATTGTATGTGTTGTTTATATTAGCAAGTTGCAAAAGAGTGACAGCTGATCAGACTGGAAGACACAGCAAAGCAAGATTAAAAAAATCCAATTTGCATTGGATATGGTAG

Protein

Gene

>AfisC3G08824
CTCCCTTGGCTTTGCTCAATCAACAACCGCATCCATTTGCATATTTTGCCTACCGCCAAACCACCTAACGTCTCACATTTCGACACCTGTCCTCAATTGGACGGCTTTCTTCCTATATATAAATTACCGCCTCAATTCACCTCTCCAACTCAAAAGTCTCAAATCCGATCAAACAAACAAAAATGCCTAATTGGAACAAGGGTCCATTCCTCGGCCGCGGCTCAACTGCCATCGTCTCCCTCGCTTCCGATCCTACCTCCGGCCAACTCTTCGCCGTTAAATCAACAAGCCTCTCAAACTCCGGATTCCTTCAATATGAAAAGAGCATTCATTCTTCGATCTCCTCTCCTCACATAATCTCTTACTTAGGATACGATTCAGACGATGACTTCTACAATCTCTTTCTCGAGTACGCCTCTGGCGGGTCCATCTCCGACGTTGTCAGAAAACAGAAGCTTCAGGAATCCGAAATCAGATCCTTCGTGAAAGACATTTCGCTTGGATTGAGTCATCTTCACTCCGTGAAAATCGCCCACTGCGACATTAAATGTCAGAACATACTCATCTGTGGCGCTGGAAGAGCAAAAATCGCAGATTTAGGTTGCGCCAAGTTTATAGACTGTGATAATCAAATTAGAGCAAAATTAAGGGGAACGCCAATGTTCATGGCGCCCGAGGTGGCCAGAGGAGAAGAGCAAGGGCTGGCGTCAGATGTGTGGGCACTCGGATGCACAATCGTAGAAATGGCAACAGGCAGAGCTCCATGGTCGAATGTTTCGGATGCAGCCTCCCTTCTTTACCGGGTTGGATTCACAGATGATCTGCCCGAAATTCCTGATTGGATTTCCGATAGTGGTAAGGACTTTTTGAGAAAGTGTTTGGTGAAGGATGCTGGTAAGAGGTCCAGTGTTGACGAGTTGTTGGAGCATCCTTTCTTAACGGGTACGGGTACGGGTACGGACGGGTACAACCGGGTTACACCAAAGAGTGTACTGGACAATAGCATATGGGATTCGGTATCAGAAAACGAAGCAGTTGCGGATTTCGGATCCAACAGGATTCTAGAATTGATCGGGTTTGGTAATGGACCCGATTGGAGCTGGGATGACAGCTGGCATACACTACGCAATGAATCATTGTTTACTGCTGCTACTGTTGCTAGTACTGCAGCTGCCGTTAGTGAAGAATTATCAGAATTTAGTTCTGAGTCTTTTGATAGCGAATTATGTGATTATAGTGATTCTAAAATGGATATATGTATTGAAGAAACTGTTAATGTTTCTGAAAATTGTACAATTAATGATGATGATGTAGAGTTGATTTTAAGTGCTAATAATATAACTGGTCTGACTGCAAACGATGATTTTTCTATGTATACGTTATTATTATTTGTAGTTTTTAAATTGTATGTGTTGTTTATATTAGCAAGTTGCAAAAGAGTGACAGCTGATCAGACTGGAAGACACAGCAAAGCAAGATTAAAAAAATCCAATTTGCATTGGATATGGTAGCATGTATATTTATATTGTCAAAACATAAGTTAAGCTGGCTTAGTATGTTTATTTTAAGGCAAGGGGAGGTCATTTACAATTACAAGCTGGTTTATCTCAATGGAAATCGTATGGGTATATGTATATTTCTATGTATATGTATTTGTATATGTTACGTGCTGAAGATGATAAATCAAAACAAGTAACACATGTCACAAATGAGAATGAAAAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010926215.1	1.9e-87	mitogen-activated protein kinase kinase kinase 18
Swissprot	Q9ZVP5.1	1.6e-62	Mitogen-activated protein kinase kinase kinase 18
trEMBL	A0A8K0MWL9	1.2e-88	Mitogen-activated protein kinase kinase kinase 18

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G55090.1	49.47	1e-75	280	MAPKKK15	mitogen-activated protein kinase kinase kinase 15

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08824	AT5G55090.1	285	130	6	3	277	5	285	49.47	1e-75	280
AfisC3G08824	AT4G26890.1	345	158	10	3	317	4	342	43.77	2e-72	270
AfisC3G08824	AT1G05100.1	299	137	8	3	281	2	293	45.15	8e-66	248

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	7	252	177.3	3.4e-52

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0000919	P	cell plate assembly
GO:0005829	C	cytosol
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0005783	C	endoplasmic reticulum
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0009524	C	phragmoplast
GO:0009793	P	embryo development ending in seed dormancy
GO:0010098	P	suspensor development
GO:0010103	P	stomatal complex morphogenesis
GO:0010229	P	inflorescence development
GO:0019899	F	enzyme binding
GO:0032147	P	activation of protein kinase activity
GO:0032991	C	macromolecular complex
GO:0034599	P	cellular response to oxidative stress
GO:0034976	P	response to endoplasmic reticulum stress
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0043065	P	positive regulation of apoptotic process
GO:0043507	P	positive regulation of JUN kinase activity
GO:0043622	P	cortical microtubule organization
GO:0044446	C	intracellular organelle part
GO:0046777	P	protein autophosphorylation
GO:0048046	C	apoplast
GO:0071323	P	cellular response to chitin
GO:0097193	P	intrinsic apoptotic signaling pathway
GO:1900150	P	regulation of defense response to fungus
GO:2000071	P	regulation of defense response by callose deposition

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20716	MAPKKK17_18; mitogen-activated protein kinase kinase kinase 17/18	EC:-	MAPK signaling pathway - plant	ko04016

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network