result

Gene information

Detail information of AfisC3G08827

Location

Gene	Chr	Start	End	Strand
AfisC3G08827	chr3	1571244849	1571246247	+

Sequences

CDS

>AfisC3G08827
ATGACTAACTGGACCAGGGGCCCACTTCTCGGCCGCGGCTCAACCGCAATCGTCTCCCTCGCTTCGGATCTGAACTCCGGCCAACTCTTCGCCGTTAAATCAACAAGTCACTCACACTCCGAATTCCTTCAGTATGAAAAGAGCATTCATTCTTCAATCTCTTCTCCTCACATAATCTCTTACTTAGGCTATGATTCGGATGATCACTTCTACAATCTCTTTCTCGAGTATGCCCCCGGTGGATCCATCTCCGATCTCATCCAAAAGCAAAAGCTTCTTGAATCCGAAATCAGATCTTTCGTAAAAGACATTCTGCTTGGATTGAGACATCTCCATTCCATGAAAGTTGCCCACTGCGACATTAAATGTCAGAACATTCTGATCTGCTGCGATGGGAAAACAAAAATCGCAGATTTAGGTTGCGCGAAATACATCGGTTCTGATAATCAAATTAGGGCTAAAATCAGGGGAACCCCGATGTTCATGGCGCCAGAGGTGGCCAGAGGCGAAGAACAGGGGCTGGCGTCTGATGTTTGGGCGCTCGGGTGCTCGATTATTGAAATGGCCACAGGCAGAGCTCCATGGTCCAATGTTTCGGATGCGGGTTCCCTTCTTTATCGGGTCGGGTTCACAGATGATGTGCCTGAAATTCCTGAATGGATTTCGGATTCTTGTAAGGACTTTTTGTGCAAGTGTTTGGTGAAGGATGCTGGTAAGAGGTCTACTGTTGACGAGTTGTTGATGCATCCTTTCTTCACGGGTACAGGTTTGGATATTGAGTACAAGCGGGTTACGCCAAAGAGTATACTGGACAATAGCGTATGGGATTCGGTATCAGAAAGTGAAGCAGTTGCTAGTTTCGGATCCAACAGAATAATGGATTTGATTGGGTTTGGTGATGGACCCGATTGGAGCTGGAATGACAGTTGGCAAACGGTACGCAATGAATCATTGTTTACTAGTGTCAGTGTTGTTGCTAGTACAAGCAACGAATTATCCGAGGTTACTTTCGATGATGAATTATGGGATTATAGTGAGGTTAATTATATGTATGAATCCGGTGAAGAAGGTGTGCTTCTTTCTGAAAATTGTACTAGTGATGATGATGGTATAGAATTGATATCAATTGCTAATAATAATATATTTAATCCGGTTGAAACTGATTTTTCTATCTATATGTTAATTATTTGTAGTTTACAGAGTGTGTCGTTTAATTTAATAATAATATTGGCGAAACTTTATGCTGTCCCATTACCCTTTTCTCTTAGTTTAAGCTGTCATTAG

Protein

Gene

>AfisC3G08827
ACCCGTCCTCCCACATTCCGACACGTGTCTCCAAGTTGGATGGCATCCTCCTGTATATATCTTCTCCACAATTCACACTTCTAATTCAAATTCATTTTTCAATCAGAAATCAAAAATGACTAACTGGACCAGGGGCCCACTTCTCGGCCGCGGCTCAACCGCAATCGTCTCCCTCGCTTCGGATCTGAACTCCGGCCAACTCTTCGCCGTTAAATCAACAAGTCACTCACACTCCGAATTCCTTCAGTATGAAAAGAGCATTCATTCTTCAATCTCTTCTCCTCACATAATCTCTTACTTAGGCTATGATTCGGATGATCACTTCTACAATCTCTTTCTCGAGTATGCCCCCGGTGGATCCATCTCCGATCTCATCCAAAAGCAAAAGCTTCTTGAATCCGAAATCAGATCTTTCGTAAAAGACATTCTGCTTGGATTGAGACATCTCCATTCCATGAAAGTTGCCCACTGCGACATTAAATGTCAGAACATTCTGATCTGCTGCGATGGGAAAACAAAAATCGCAGATTTAGGTTGCGCGAAATACATCGGTTCTGATAATCAAATTAGGGCTAAAATCAGGGGAACCCCGATGTTCATGGCGCCAGAGGTGGCCAGAGGCGAAGAACAGGGGCTGGCGTCTGATGTTTGGGCGCTCGGGTGCTCGATTATTGAAATGGCCACAGGCAGAGCTCCATGGTCCAATGTTTCGGATGCGGGTTCCCTTCTTTATCGGGTCGGGTTCACAGATGATGTGCCTGAAATTCCTGAATGGATTTCGGATTCTTGTAAGGACTTTTTGTGCAAGTGTTTGGTGAAGGATGCTGGTAAGAGGTCTACTGTTGACGAGTTGTTGATGCATCCTTTCTTCACGGGTACAGGTTTGGATATTGAGTACAAGCGGGTTACGCCAAAGAGTATACTGGACAATAGCGTATGGGATTCGGTATCAGAAAGTGAAGCAGTTGCTAGTTTCGGATCCAACAGAATAATGGATTTGATTGGGTTTGGTGATGGACCCGATTGGAGCTGGAATGACAGTTGGCAAACGGTACGCAATGAATCATTGTTTACTAGTGTCAGTGTTGTTGCTAGTACAAGCAACGAATTATCCGAGGTTACTTTCGATGATGAATTATGGGATTATAGTGAGGTTAATTATATGTATGAATCCGGTGAAGAAGGTGTGCTTCTTTCTGAAAATTGTACTAGTGATGATGATGGTATAGAATTGATATCAATTGCTAATAATAATATATTTAATCCGGTTGAAACTGATTTTTCTATCTATATGTTAATTATTTGTAGTTTACAGAGTGTGTCGTTTAATTTAATAATAATATTGGCGAAACTTTATGCTGTCCCATTACCCTTTTCTCTTAGTTTAAGCTGTCATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010926215.1	8.0e-83	mitogen-activated protein kinase kinase kinase 18
Swissprot	Q9ZVP5.1	4.7e-64	Mitogen-activated protein kinase kinase kinase 18
trEMBL	A0A8K0MWL9	1.4e-84	Mitogen-activated protein kinase kinase kinase 18

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G26890.1	47.95	4e-73	272	MAPKKK16	mitogen-activated protein kinase kinase kinase 16

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08827	AT4G26890.1	292	135	5	3	283	4	289	47.95	4e-73	272
AfisC3G08827	AT5G55090.1	396	188	12	3	358	5	395	41.16	6e-72	268
AfisC3G08827	AT2G32510.1	292	140	6	3	278	2	290	45.55	7e-68	254

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	7	252	185.3	1.2e-54

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0000919	P	cell plate assembly
GO:0007010	P	cytoskeleton organization
GO:0005829	C	cytosol
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0005783	C	endoplasmic reticulum
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0009524	C	phragmoplast
GO:0009793	P	embryo development ending in seed dormancy
GO:0010098	P	suspensor development
GO:0010103	P	stomatal complex morphogenesis
GO:0010229	P	inflorescence development
GO:0019899	F	enzyme binding
GO:0032147	P	activation of protein kinase activity
GO:0032991	C	macromolecular complex
GO:0034599	P	cellular response to oxidative stress
GO:0034976	P	response to endoplasmic reticulum stress
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0043065	P	positive regulation of apoptotic process
GO:0043507	P	positive regulation of JUN kinase activity
GO:0044446	C	intracellular organelle part
GO:0046777	P	protein autophosphorylation
GO:0071323	P	cellular response to chitin
GO:0097193	P	intrinsic apoptotic signaling pathway
GO:1900150	P	regulation of defense response to fungus
GO:1902589	P	single-organism organelle organization
GO:2000071	P	regulation of defense response by callose deposition

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20716	MAPKKK17_18; mitogen-activated protein kinase kinase kinase 17/18	EC:-	MAPK signaling pathway - plant	ko04016

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network