result

Gene information

Detail information of AfisC3G08879

Location

Gene	Chr	Start	End	Strand
AfisC3G08879	chr3	1579380179	1579387538	-

Sequences

CDS

>AfisC3G08879
ATGGAGGAAAACGAGAAGAATGAATTTGTGAGAGCCGATCAAATAGACCTCAAAAACCTCGACGATCAGCTGAACAAGCATTTAACCAAAGCGATAACATTGGAAAAAATGAAGAAGAAAGAAGCAATCTGCGCTAGTGGAAATAGCCCTTATAGGGAAAAAGAAGAGTGGGAAATTGATCCTTCGAAGCTTGTGATTAAATCTGTGATTGCTAGAGGAACATTCGGCACTGTTCATCGCGGCATTTATGATGGTTTGGATGTTGCAGTTAAATTGCTTGACTGGGGTGAAGAAGGCAGCAAAACAGAAGCTGAAATTGCAGCCCTTAGGACAGCTTTCTCTCAAGAAGTTTCGGTTTGGTATAAGCTTGATCATCCAAATGTGACAAAGTTTATTGGAGCTGATATGGGATCGCAAGAACTAAAAGTACAGACAGAAAATGGTCAATATAACATGCCAAACAATGTGTGTTGTGTTGTTGTTGAATACCTTCCTGGGGGTGCACTAAAGTCGTATCTCATAAAAAATCGAAGAAGAAAGCTTGCATTCAAAGTAGTTGTGCAGATGGCTCTCGATATGGCTAGAGGGTTAAGTTATCTTCATTCGAAGAAAATTGTGCACAGAGATGTGAAAACCGAGAATATGCTTTTAGACAAATCAAGAACTGTAAAAATTGCCGATTTTGGCGTTGCACGTATAGAAGCACAAAATCCAAACGACATGACTGGGGAGACTGGCACACTTGGCTACATGGCTCCTGAGGTGCTGAATGGAAAACCTTACAATAGAAAATGTGATGTGTATAGTTTTGGCATATGCATATGGGAAATTTATTGCTGTGATATGCCTTATCCCGACCTTAGCTTCTCTGAAATTACATCTGCCGTCGTCCGACAGAATCTAAGGCCGGAAATACCGAGATGTTGTCCGAGTTCGTTTGCGAATGTGATGAGAAGATGCTGGGATGCAAACCCGGACAGACGACCGGAGATGGATGAAGTGGTTGAAATGTTGGAGGCAATAGACACGTCTAAAGGCGGTGGGATGATACCTATTGATCAACAACAAGGATGCCTTCCTTGTTTTCGAAGACATCGAGGACCATGA

Protein

Gene

>AfisC3G08879
ACGATTGTTACAACTTTCTTTCAACAGCTTTGTAAAAATTCGTACTTTAATTTTTCTTCAAATATTATATATTTTAAAATTTCAAAATTTTCGCCATTGATTTCCCTTTCCAAAGCAACTGAAAAAGCGAAACTCACATGAAACCCAAATACCGGAAAAAGTTAAAGACCAACAACCTAACAATTTCAATTCAATCCAACGAAAAGTGAAGCCACTTCCGAAAAAGAAAAAAGAAAAAAAAAATGGAGGAAAACGAGAAGAATGAATTTGTGAGAGCCGATCAAATAGACCTCAAAAACCTCGACGATCAGCTGAACAAGCATTTAACCAAAGCGATAACATTGGAAAAAATGAAGAAGAAAGAAGCAATCTGCGCTAGTGGAAATAGCCCTTATAGGGAAAAAGAAGAGTGGGAAATTGATCCTTCGAAGCTTGTGATTAAATCTGTGATTGCTAGAGGAACATTCGGCACTGTTCATCGCGGCATTTATGATGGTTTGGATGTTGCAGGTGGTATCAAAATTCGATTTATGTTTGTACTCGATTTGCTCGATATTGGAAAGTTGTGTGCTCATTTAGATTATTTTGGGTTAGGTTTTTTTTTTCTGAGCATCTTGCATATTTCTTTCTGAAATTAAAATGATTTACTGTTTAGGAGGACTTAACACAAATAAAATGATTTACTGTTTTATCCATCGGGCGAAGCAAAATTTTGCAACATTTCAACGATGACTGTTCATTGAAAACATTTTCAACAGTGTCTAATCGGAGAAAAACATAAACCGGTAATTGGTCACTAAAAAACGAAGGTTAGTTACAGAGGTATATTTTTTCTGTTAAGGAGGGGCAAATGTTTTTGTACACCCTTGTCATTTTCTAGTCCATAATAGTTCAACTATTATTGTAAATGTTTTCGTTTCAAGCAAACGGGCACAGAAAAGAATTTGAAAAAAAAATTAGTCCCAAAGACAACAAATTTGCTTTTTAGTCTGAACGACACTCTCTACTGTTCTAGTGTCCTTCAACCTAAAAAGCAAACTTCTTGTATCTAAAATTAAATTTTTCTTGTTTTCTCACAATTCATATCTCTGACTCTATTGAAACTATTCTTTAATATTTATTATAAAATTGGTGTGTTGCTAAGGTTGGTAGATTCCTCTTCTTGGTTCAGTTTTGAAATAACACCATCAAAATTTGTTCCACTTCCTAAAACTAAAATGTTATGGCCACCATGTTACCGTACTATGGCAATTTCCAGTCAATCAACGGTTTTTTTACCATCTAGGTAAAATCTGCTGTGAAAAATCATCAGATGGTGATTCTTCAAAGTTGATTTTTATGTGAACAATGATTTTCAACTAAGTCAAAATAATAGAATTGCTGCTATTAGTAAGTATAAAGTTTTATTCATTATTATTAAATATTTCATTGTATTTGTAAAAGCAAAATACGATGCCCATCTTAGTTTAAGAAATTGATTGGAGAAAGCCTATGAAAATGCGGTAATTGTAGGCTTTCAACCTTGGTTGGTAACTGTGATCTAAACATTTCTTAGTTGAATTGATTGAAGAAAGTATGAAATATTTCAAAGTTGAAACAAAATAGTAATCATATTAAGAGATCGGTAGGAAAAATTAAATTGTTACTTATATGGGAATAAAATGAACTGGACAAAGACAACTAATGTTTAAATTATTAAGGGTTTTTGGGCAAAATGATACATGATATTTCATATAACATATGTCATTTGCCGTCTAATTTTGCCAAAAAAGAAGAGAAGAAAAGAAAAAACCTTTAATAATTCTAAGATCAGTTTAACTTCTTTATTCTATTCAATCTGTTTCAGTATTTGAAAAAAAAATTGTTTTCTACTATCGATTTTCGATTTCTTCCATCTGATTATCATTTTGTTCCAATGCAAAAAGTAATTCATATTTTCTTCAATCAAATCCATTTAAAGCTGGATAGGTCATTTGAATTCTTTTTCATTGCTGGTACTATGAAGGTCATGAAATTTTTGTATCTTAATGGTACGATATAATAAATTAAGCGAAGAAAAATAGTTAAGGAGACCATTGGGTATTAGAATAGGTAGTTAGGACCGTTAACAAACCACCAACACCCCCCCCCCCTCTCCCCCCAAACAAAAAGAGAAAAGAAAACATACATATAGTTAGGACTCTTTTATTTGGTAGTCACGACTTTGTCATTTAGTTTTGGGTTCCATCTCTAACCGATCCCAACTTGTTTGGGAATAATGGCGTTGTTGTTGTTGTTAGGACTGTTAATACCCTTCCCCTCCCCCCAAATGTCATGCATCAATCAACATAATCCCATCATCGGTTTGCAACCTCCATCACTATTTTCTTACCAACTATCCATCAATGGAATTTCGCCTTCAATTTACATGAAATAGAAGAGTCGTGACTACCAAATCTTTTGCACTTATAACATTCATCCGTCCATAAAGTTTTTTATTAAATAAAAAGTAAATACCTCTAGCTATTAGATGCACGTACGTGCGATTTACATTAGTATGTGTGTGTATTTGAAATTCGCCCGTATCCATAAAACGAGAAAATATCCAATATCTGAAAAACGAATGCGATGGATATGGTTTTATCCACATTCGAAAATTATTCATTCAACTTGTATTATGATAATGTTATGTATTATGTATACTTTGATACGTAGAATGATTGTTATTACCATTTTATCATAGCAATAATTCATATCAAGTGTATATGAATTTATTTGTATCTCCATATGATTATTTTTATTTTTTGTAGTGTTATAAGCATTAGTACTGAAAGGCTTTTACGTTGAGCCGAAAAAAAGTTATTTATCTTTCTGAACTTATGCTTCTTGAGGTATTAATTCTAAGTAGATAAGATATTATCTCATAGTCATCCGCATTCGTGGATGCGGATATCCGATATCCAAAAACAATCAAGTTTGGACTTATTTTGAGATAAATATGTTCATGGTCCGCAAAACACCCTCTTCCATTTCTTTAGATATAATCCAGTTTCCTATGATACAACCCTTCTGTGAATTATTTTTCCCCATAATCCCTATACTATAGCTTCTATCAACCAAATTCTTGCTCTTCCCACTTGTCCTCTTGCCCACTTCTCTTCTACTTTCATCCTTACATTTGATCCCCCATAAACCTAATCTCTATCAAAGTATCAAACTATATTTTCTATTCCATAATTTCCTAGTTCTAAATTTGTATTGGCGGAGATTGAGATCGAGATTGTGAAGACTTCCCGTCTGTCATCTTCTACTTTTGTTATTTTAGTTTGACGTTAACATCGAAAATGCTAAATTAGTAAATTAACATTTTAGAATTAAAATGAAAAGAGTTTAGGTGGGATGAAGAGCGTACTACAAGAAAGAGAAGTAGAAGAAGAAAACAAAAGGTAAGGGTGAATTAGTATTTGTATGTTATTTTTACAAGGGTAGAGTCACAATATCTCGACATAAGCCAAGAGGCTGATCTTGTGCCACTCCACCAGGTCGTATGAAACTGGCATGCATCCTGCCTCCCAAGACTCTTTCATAGAATTCCAACAATTTCTCCCACTCCTCAAAAGCCCAAAGGAACGGAGTTGATGCTCCCACATCCATAGCATGAGTAGTTGAAGCAAGTGAATGATTTGAAATTCAAGTTATTTCTGATTTGATTTGCCTTTAATAGAAGAAGATGGGAAAAAATTTAGGTAGTGTTTGGTTTGTTGTTTTTAGTTTCAGGTTTCGTTCATACAAAAGTGCACATGACGCATGTGTATTGCCGAAAACGATTAATTTAGAAAACGAAGTTAACATACAAAATAGAAAACAATTTTTTGTTTTTGTTTTTCGTGTTTTGAAAAATAACACAATCACGTGAAATAATCCATTCTTCCGTCGTCCCTCTATCTCCTTCGTCATTTCATCTGTCTTTCTTTCATCTTCTTCGTCGTCCCTCAATTTTTCTCATATTTGACATACATGTTGAAAACCGAAATCGTAAAATTTGTTTTTAAACCAAACACTACCTTAGTTTTTTCATTCTTCTTATCAATATGTTTCTCCCTTTAATAATTCTCCAAATTAAGGTAGCTAAACATTTCAAATGTTAATGGGATGGAAACCTGGAAGCTGAATGGCTAAGAAACAAATAACTTAGTTTTCTAAAAAGTCTCTGATATGTTTTATCTTTCTGATAAAGGGAATATTATAGGTAATTTAAGGTTTGTTACAATGATATACCTTCATGATTCAATAGCAAGTATATATTTTGATTATAATATGAGAGTTTTGGAGGATATTTTTGCAAAAGACACACACATATATATAATATTTCAATTGGTTGGAACTGAAAGAGTTGGGGATGGCAATTTGATTTCATATTGTAGAACTAAATGATTATATACATACATACATACATTCACACACATACATACATATACATATACATATACATATATGTGTGTAATATTTCAATTGGTTGGAACTGAAAGAGTTGGGGATGGAAATTTGATTTCATATTGTAGAACTAAATGATTAGTGTGGAGTGTTAAACTTCAATAATACCATTTAAATGTTAATTTGGAATTCCTATGGGTTGCATGTATCCTATTTTTGTTTATTTAGAAGAGAAGAAGATCTGAATTTTATAGTACAAATTCAAAGCATTTCCAACTCACGGAGATGAGTATACTTTTAAGTTTCACCAGCATTTTTCTTGTTCAGCCACACCAACACACAAGCACACAACAGCATGCGCGTACACACACAACAATTTTGAACCAAACATATAAACCACTCTACAAAAGTACAACTGAAAATGATATATAGTTACTAGCCCATTAAAAATAACTTATAATTTATTTATAAATATTCAAGAGAAAGAAAATTACATCGGCTCTAAAAAAAAAATTCCTGGGGAGGAAAAAGTCAAGAAAAAAAGTAAATCATTATTGATTTTTTCCAGTCATTTGACTCTAAATTTTGATATCTTCCGTTTTACAGCTATATGACTTTTGTTCATACTTTCTTGGGCACAAGGTTACTTGTGATATCACAAGTTGTGCTTTTTATTTGCATGAACTTCCATGTGACACCAATTGACCACTTGGCTGTTATTTTTCTTGTGATGTCAAGTGGATGGATAAAAAGCAATTTAACTAGCACAAAAGCCCTTAAGCATGGTTGTTAGATGAAAATCAAAAAGCAAATATGTTGATCGCAATAATGGCTCAGGAAAGGAGAAAAAATGAGTCAGGCATGAGTTTTATTTTATTGTTTTAAGTAGGTATTATACTTAATCCAAATTCTACATATGGATGTTAACCAACTTAAGAGATTTTCATCAAGTAATTGATTCTGACCTGAATAATAAACTATGTATAGTTAAATTGCTTGACTGGGGTGAAGAAGGCAGCAAAACAGAAGCTGAAATTGCAGCCCTTAGGACAGCTTTCTCTCAAGAAGTTTCGGTTTGGTATAAGCTTGATCATCCAAATGTGACAAAGGTACTACTTCTACATGCTTTACAGAATAAATTTAAGTATCAGCCTCAACACATTAAGCATTTTGTGTATAACATTCATTTATCTTCATATATTAATCAAAAAATCAAAATTGAAATGGTACATCAATATATTTTTTAGCCAACATGCTTAATGTACCTAGACTCCTTATTTTATTCTCAAATTACCAAGTCAAGTTATGCCATAAAAGGCTATCTCAAACTGACATGCCTAAACAAGATTCAGTGAACATCTGGATATAACTAATTTCCACTTATTCAAGTAGATGTTTTTTGCACTTGTACCGCTTTGTTTTATCTCACCAGATATATGACATGCACATAATCTATAAATAACATGATATACTTGGTTGTGTCCCTTTTTTTTTTTTAGTTTATTGGAGCTGATATGGGATCGCAAGAACTAAAAGTACAGACAGAAAATGGTCAATATAACATGCCAAACAATGTGTGTTGTGTTGTTGTTGAATACCTTCCTGGGGGTGCACTAAAGTCGTATCTCATAAAAAATCGAAGAAGAAAGCTTGCATTCAAAGTAGTTGTGCAGATGGCTCTCGATATGGCTAGAGGGTGAGCAATATACATAACATATACATATGTATGTATGTATGTATGTTCCTGAGCTATGTATGTTACAAAGAGTTAAATTTTTGCAATGTATTTCAGGTTAAGTTATCTTCATTCGAAGAAAATTGTGCACAGAGATGTGAAAACCGAGAATATGCTTTTAGACAAATCAAGAACTGTAAAAATTGCCGATTTTGGCGTTGCACGTATAGAAGCACAAAATCCAAACGACATGACTGGGGAGACTGGCACACTTGGCTACATGGCTCCTGAGGTATTATGTTATATGAGGAGAGTTGCGACTACCAAAATATTATCTTCTTTTCAGTATAAATCATCCATTTTAAGATAATTGCAGGTGCTGAATGGAAAACCTTACAATAGAAAATGTGATGTGTATAGTTTTGGCATATGCATATGGGAAATTTATTGCTGTGATATGCCTTATCCCGACCTTAGCTTCTCTGAAATTACATCTGCCGTCGTCCGACAGGTACACATAGTTATGACTGTCCTAAATCTTTTATGCTTTCGAAGAAGGCAAAACCATTATCAATACATTTGAAATATAAAGGAAAGAAAATATAGAAGGAAATGGTATGAAAACAGTTAAGTTTCGTCCATGCTTTTGTATATTCAATGGGACTTGTAAAACAAAATAGAATATCCTGTAAGTTTCGAATCCCGAATCTGACAACCCTAAAATAAGCATTCGGAGTGTGTTTGACAGGTTCATACTTTTTCAGAGTTTACATGCGAAACTTGGTCCTTCTGGTTTTTATTTTTTATTATTTATTTATTTATTATTATTATTATTAACTACATAAACTATGAAATGATATTATGAAATATATTACAGAATCTAAGGCCGGAAATACCGAGATGTTGTCCGAGTTCGTTTGCGAATGTGATGAGAAGATGCTGGGATGCAAACCCGGACAGACGACCGGAGATGGATGAAGTGGTTGAAATGTTGGAGGCAATAGACACGTCTAAAGGCGGTGGGATGATACCTATTGATCAACAACAAGGATGCCTTCCTTGTTTTCGAAGACATCGAGGACCATGATATAAAATATCTATGATTAGTTGTTGTTGCTATTAATTGTAGTTGTTAACAGTCTATTTTATGCTAATTTCTTGTTAAATGTTGTTAACATTTGGGAAAATGTATGTATATGAGCATATCTATGTTGCCTGGTTGTTCTTGTTGTTTGTTACTGCTACCTCTAGGTTCTTTAAGCTAAATTAGTG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020251627.1	5.3e-184	serine/threonine-protein kinase HT1-like
Swissprot	Q9ZQ31.2	6.5e-62	Serine/threonine/tyrosine-protein kinase 13
trEMBL	A0A5P1FTA9	3.8e-184	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G50000.1	76.70	3e-178	621		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08879	AT5G50000.1	382	69	3	6	368	5	385	76.70	3e-178	621
AfisC3G08879	AT3G01490.1	400	67	3	9	368	13	411	73.00	1e-175	612
AfisC3G08879	AT3G22750.1	371	102	5	4	368	25	378	66.31	1e-149	526

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	65	338	210.9	1.8e-62

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001666	P	response to hypoxia
GO:0002831	P	regulation of response to biotic stimulus
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0004871	F	signal transducer activity
GO:0035556	P	intracellular signal transduction
GO:0005634	C	nucleus
GO:0005768	C	endosome
GO:0005789	C	endoplasmic reticulum membrane
GO:0009617	P	response to bacterium
GO:0009620	P	response to fungus
GO:0009658	P	chloroplast organization
GO:0009686	P	gibberellin biosynthetic process
GO:0009723	P	response to ethylene
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009744	P	response to sucrose
GO:0009750	P	response to fructose
GO:0009968	P	negative regulation of signal transduction
GO:0010119	P	regulation of stomatal movement
GO:0031347	P	regulation of defense response
GO:0032101	P	regulation of response to external stimulus
GO:0044431	C	Golgi apparatus part
GO:0046777	P	protein autophosphorylation
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0071281	P	cellular response to iron ion
GO:0098542	P	defense response to other organism
GO:2000035	P	regulation of stem cell division
GO:2000069	P	regulation of post-embryonic root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network