Detail information of AfisC4G00088


Location
GeneChrStartEndStrand
AfisC4G00088chr41811210718122318+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK66011.12.4e-180uncharacterized protein A4U43_C06F3260
SwissprotQ9C8M9.13.6e-149Leucine-rich repeat receptor kinase-like protein SRF6
trEMBLA0A5P1EN701.7e-180Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G53730.156.140.0 718SRF6STRUBBELIG-receptor family 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag332941.t1
Allium fistulosumAfisC4G00088
Allium sativumAsa4G00245.1; Asa4G00286.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08263.9LRRNT_2Family276629.46.7e-07
PF13855.3LRR_8Repeat9415236.23.4e-09
PF13855.3LRR_8Repeat15920127.41.8e-06
PF07714.14Pkinase_TyrDomain414685128.13.1e-37

Gene Ontology
AccessionOntologyName
GO:0000902Pcell morphogenesis
GO:0002221Ppattern recognition receptor signaling pathway
GO:0005576Cextracellular region
GO:0005829Ccytosol
GO:0004675Ftransmembrane receptor protein serine/threonine kinase activity
GO:0007169Ptransmembrane receptor protein tyrosine kinase signaling pathway
GO:0046658Canchored component of plasma membrane
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0007623Pcircadian rhythm
GO:0009506Cplasmodesma
GO:0009816Pdefense response to bacterium, incompatible interaction
GO:0010059Ppositive regulation of atrichoblast fate specification
GO:0010063Ppositive regulation of trichoblast fate specification
GO:0010071Proot meristem specification
GO:0010305Pleaf vascular tissue pattern formation
GO:0019901Fprotein kinase binding
GO:0035420PMAPK cascade involved in innate immune response
GO:0042127Pregulation of cell proliferation
GO:0046777Pprotein autophosphorylation
GO:0048366Pleaf development
GO:0048481Pplant ovule development
GO:0071323Pcellular response to chitin
GO:1900150Pregulation of defense response to fungus
GO:1900426Ppositive regulation of defense response to bacterium
GO:1900459Ppositive regulation of brassinosteroid mediated signaling pathway

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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