result

Gene information

Detail information of AfisC4G00170

Location

Gene	Chr	Start	End	Strand
AfisC4G00170	chr4	28143327	28149484	+

Sequences

CDS

>AfisC4G00170
ATGGCGGCAAACATTCCTGAGCTATCCTCTTCCTCCTCCTACGTCTCCAACGCTTCCTCATCCAACGACGCCTCGGCCACCGGCCTCGAGATCGTCAGCCTCTCGAAACTCAGTTTGAATCTCGAGCAGCTGCTTATCAGCGACGAGTTCGACTGCACGGATGCGGACGTAATCATTGACAACTCCCCCGTGGGTGTCCACAAATGCATTCTAGCGGCGAGAAGCGGTTTTTTTAGGCAGTTATTTAAAGAGAGTAAGGAGAAGGATGAGGGATTGGAAGGAGGGGAGAAGAGGGAGAAGTATTATATGGATGAGATGATGAAGGAGAAGGGGAAGGTTGGGCGAGAGGCGTTTATGGTGTTTTTGGGGTATCTGTATACTGGGAGACTGAGGCAGTCGCCGGTGGATGTGTCGACGTGTGTTGATGGTGGATGCGCTCATGATTCCTGCCGCCCTGCTGTTGCTTTTGCTGTTGAGATGATGTATGCTAGTTTTGTGTTCCAGATCCCGGAACTGGTTTCTCTGTTTCAGCGCCGTCTTCTTAACTTTGTTGAGAAGGCTCTAGTGGAAGATGTCATCCCCATTCTCTTAGTTGCCCTCCATTCACAACTTGATCTATTGATCGAACGGTGCATTCAAAGAGTAGCAAGATCCGATCTTGATAACATTTCTCTTGGCAAGGAACTGCCTCCTGAAGCTGTAGATAAAATTAAAACAATACGTAAAAGTTCTCAAACTGACAGAAATTCACCTCTACTTGAAATGGACCCAGTCCAAGAAAAAAGAATTAGAAGAATACATAGGGCTCTTGATTCAGATGACGTTGAGCTTGTGAAGTTGTTACTAAGCGAATCAAATGTCACTTTAGATGATGCAAATGCTTTACACTATGCTGCTGCTTACTGTGATTCGAAGATAGTTGCAGAAGTGTTGGCACTTGGCATGGCTAATGTAAATCTAAAAAATAATAGAGGATACACTCCTTTACATATTGCTGCTATACGAAGAGAACCAGCTGTCATTGTCTCACTTCTTGATAAAGGTGCTCGCGCATCAGAAATGACAGGCGATGGTCAAAGCGCTATTAGTATATGTAGAAGGCTTACTAGAGCAAAAGACTACCATGCAATTACAATGCAGGGTCAAGAATCGAATAAAGATCGGGTATGCATAGATATACTAGAAAGGGAAATCATGAGAAGCACGATGGTTGGAGATGAGTTTATAACTTCACTTATGATGTCTGATAATGTGCATGCAAAGATCCTGTACCTCGAGAATAGAGTTGCATTTGCCAAACTTTTCTTCCCTGTGGAGGCAAAAGTAGCCATGGAAATTGCACAAGCAGAAACAACCTCCGAATTTGCAGGTCTTTCTGTATCAACAAGTACTGGTAACCTTAGGGATGTTGATTTAAATGAAACTCCTGGCAAAAGGTTGCGTTCCAGAGTGGATGCCCTTATGAAAGCAGTGGAGCTGGGTCGACGTTACTTTCCGCATTGCTCTAGAGTGCTCGACAAATTTCTAGAAGACGATCACCGTGACCTCTTCTTCCTACAAAAAGGAACTCCAGATGAGCAGAAGATGAAAAAGAGACGCTTCTGCGAACTAAAAGACAACGTTCTCAAAGCTTTCAGCAAAGACAAAGCTCAGGGTTGTCGTTCTGGATTTTTCTCTTCTTCTTCATCATCTTCTCCACAGAAAAGTGAACATATGAAACATAGATCTGCAAGTAAATAG

Protein

Gene

>AfisC4G00170
GAAATCACCACGAAAGCCGCGAACTTTTCCAACTGGCTCACGTCTCTGCTGATGTCACCATACCCACCCACCTTCCTCTGATGTCATACATCTCATCATCTTCTCTTCTCAAATTTCTCCTCCCGGTCTGCTCACCTCCCTCTTAGCTTTCACAACAAAAATCAAATCAAATAACTTCGAAATACCAAATCCGTCATTATCATGTAAACCTTCGAATCTCGCAATATTTTCAATGGCGGCAAACATTCCTGAGCTATCCTCTTCCTCCTCCTACGTCTCCAACGCTTCCTCATCCAACGACGCCTCGGCCACCGGCCTCGAGATCGTCAGCCTCTCGAAACTCAGTTTGAATCTCGAGCAGCTGCTTATCAGCGACGAGTTCGACTGCACGGATGCGGACGTAATCATTGACAACTCCCCCGTGGGTGTCCACAAATGCATTCTAGCGGCGAGAAGCGGTTTTTTTAGGCAGTTATTTAAAGAGAGTAAGGAGAAGGATGAGGGATTGGAAGGAGGGGAGAAGAGGGAGAAGTATTATATGGATGAGATGATGAAGGAGAAGGGGAAGGTTGGGCGAGAGGCGTTTATGGTGTTTTTGGGGTATCTGTATACTGGGAGACTGAGGCAGTCGCCGGTGGATGTGTCGACGTGTGTTGATGGTGGATGCGCTCATGATTCCTGCCGCCCTGCTGTTGCTTTTGCTGTTGAGATGATGTATGCTAGTTTTGTGTTCCAGATCCCGGAACTGGTTTCTCTGTTTCAGGTACAGCTGAATTGTTTCAAATAATCATCATATTGTGAAAGTGAATTATTGTGAAGTAATGATTGTTGAACTTCTTTCAAGAAGTTATTTTGCTTTTGAAGTAGCTACATTCTTGTCACACCCAGGCTAGATGGTTATATACTCCTTGACATAACTGAATACTTAAGGATGTGGAATAGAGTTTGAGGTTGAAAAATGACGTTTATGATAGTTTTGAGTGATTAAACATGAAGCTTTTACAATCTGCGTGAATATTGGATACATTAATTGTTCTGTAGCTAGACATAAATCAATTGTAATTCTGTGTCTAAAAAGAAATGAAATTTTCTTACAAACTGATCCATACATTGTCTACTGAATTTAAGAGCATTTGGCAGCAATCATTGTAGTACAAAAGTTAATTGATTACTGGATGTACTTCACTATTTTGGCCATGGCTGCAGATTAGTTGAACCCATCATAAACTGTAAGAGGAACTACTATTTTTGTTAATAATGTAAATATATTATCCAGTAATGGTATTTGGTATGAACCTTGTTACTGTTGCTTGATGAACTTTGACCTGGAGTAGCCATTATAGTATTAAGGTTACCTGATCATTGAAAGTTGAATGTGAAATCTTCTTTCTTTCTGTTTGTTTCCCAGGTATAAACATGTAACAATACTCTTCAACCTTTCTTTAAGTGATAAATAATTGGTTTGTCTATTCTGCAAATCTAACTTCCAAGTTTAAATCTCATTCAGCGCCGTCTTCTTAACTTTGTTGAGAAGGCTCTAGTGGAAGATGTCATCCCCATTCTCTTAGTTGCCCTCCATTCACAACTTGATCTATTGATCGAACGGTGCATTCAAAGAGTAGCAAGATCCGATCTTGATAACATTTCTCTTGGCAAGGAACTGCCTCCTGAAGCTGTAGATAAAATTAAAACAATACGTAAAAGTTCTCAAACTGACAGAAATTCACCTCTACTTGAAATGGACCCAGTCCAAGAAAAAAGAATTAGAAGAATACATAGGGCTCTTGATTCAGATGACGTTGAGCTTGTGAAGTTGTTACTAAGCGAATCAAATGTCACTTTAGATGATGCAAATGCTTTACACTATGCTGCTGCTTACTGTGATTCGAAGATAGTTGCAGAAGTGTTGGCACTTGGCATGGCTAATGTAAATCTAAAAAATAATAGAGGATACACTCCTTTACATATTGCTGCTATACGAAGAGAACCAGCTGTCATTGTCTCACTTCTTGATAAAGGTGCTCGCGCATCAGAAATGACAGGCGATGGTCAAAGCGCTATTAGTATATGTAGAAGGCTTACTAGAGCAAAAGACTACCATGCAATTACAATGCAGGGTCAAGAATCGAATAAAGATCGGGTATGCATAGATATACTAGAAAGGGAAATCATGAGAAGCACGATGGTTGGAGATGAGTTTATAACTTCACTTATGATGTCTGATAATGTGCATGCAAAGATCCTGTACCTCGAGAATAGAGGTCAGTACACACTCAACTATAATATGAGGCTTTTAAAAACAAAAACATGCTAAGATTTTACTGAATTATTTATTACTCTACCAAAAATCTCCAATTGAGATATCCGATAGAGGGCATGTACACACATTGTGAGCGGTGCAATTCCTCTGTCCCCAATTTCCTTATCCCTCTGCCCCAAATTCATCTCAGCCGTCAATTTATGTATGATATGGTTACTATAATAGCATGGTGTGACCCATGCAGTAATTAGATCACATGGTGTGTGGTTATGGTTTAACTGGGTATATGGGGACAGAGGAATTGAGCTGCATTGTGAGCATTGATTGGTGTGCTTGAAAAAAACCAAACTGTTCATTGGTTTTTGTGCATTTTTCCCCCTGTATGGTTGTTACATGAGATTAATAATATATTTTCCCTGGTTAATATTTTGAGAACAACATGTTGATGCTCCATTGATATAGCTAAGGGTCTGTTTGCTTTTTGGCCTTTTGAAAGTAAAAAATAATACATTTTGGCTTTTAAAAAGCCAAAAATAACTTATTTAAGTCTATCCACTTAAGCATCAAGCAATGTTTTCTTGGTCACTAATTGGACCCAAGAAGTGAATCTTTCACTTTGTTTGTTAACTCAGCTGCATTTGCCAAATTAGCTCTAACATCACTCTTTCTTTGTTAACTCAGTTGCATTTGCCAAACTTTTCTTCCCTGTGGAGGCAAAAGTAGCCATGGAAATTGCACAAGCAGAAACAACCTCCGAATTTGCAGGTCTTTCTGTATCAACAAGTACTGGTAACCTTAGGGATGTTGATTTAAATGAAACTCCTGGCAAAAGGTTGCGTTCCAGAGTGGATGCCCTTATGAAAGCAGGTATCTTAAGATGTTTAACTGCAAATCCAATATGCATTTATGAGTAATAATGCACATTCTCAATTTCATGTAGTATGATTAACAATCAAGTCCATCAAGTGTGTACATATTAGTTACTACATACCGTTGATCTTCATAAAGTGTAATTTTCATTTACCTTTGACCTCGATTGAAGAGAAACATCATGAACTTGTAAAAAAGTATCCTTTCTTTGCATCACCTTTCTTTGCATCACTGTCTCAAGTTCCATCTTTTCCGCCTATCTCGTTTGAGATCTCAATTTGGCACTTCCACGAGATGAAATCTCGAACAAGTGTACAATAATTCAAATTTCGTTTGAATTTATCAATGTTTTAGTTCTTGGTTTTGGTAGAATTTCGATATATTAGTAAATTTCGGTTCTCGTTTCGGTTCCAAATTTCATTGATTATTTTCCATATGGTTACACATATATGTGTTCAATTTATTGAAACAGAATGTATCATTTATCTTTAGTTGAAAAATAACATATAAACGAAAAATACCGATTAATTATAAATATTTATAGCACTAAAAAATATTAACATTACTTCGTTTTCAACTTTTTTTTAGTTACACCATTTATGTATTTCATCATTCTCTATGTTTACTAAGTTAAAATTTCCGATTTTGAATATCTATATATTTGAAACTGAAATTAATTCTTGTTTTGAGTTTCTTCTATATAATTTGAAGTTCGGTGGCTTTTTTTATAGAACCGGAGTTTCGGTTTTGTTTCATTTCGGTCTCCTTTGAAACCAAAATGGAATGATTGAAATTTCAATGTTTCGGTCGATATCTCAAACCTTGGAATTTATATGTTTTTCTTTTACATTTTGTTCAACTTTTTATATAGATTCATAATTAGCTAAATCCTTTTTCATTTTTAAACTGTTCAATTGTAGTTATGAAAGACTTCCTTTTTTCAATGTTTGCATTAAAGAAACATTTGGTCATTGTAAATAAATTACGGAACTACCATTATGCCCCTTTCTTAGAGATTTAATAAAAGGTGGAACCCAGTGCACAAGGCTCCCGCACGATAGCGGACTCTGGAGAGATCGATAATACTCTTTTTTTCCAACAACTCTCTTATGCGAATAAGTATGTTACTATTTTTTTCCACTTTTAGATAACCAATTATTTACAAATAAAACCATTAATGTAAATTTTATACATGTAAGTTACTCTAAGATGGTCTCGAGACCTACTTTAAGATCAAAGATGTTGATCCTAAATGTAAACTTGAATCTCGATACACTCATTTCGTTATCATGTATGAACATCTTGATATTTGAAACCTTGTTTGCCGACCATTTTCCTATTACCATTTCTTGATGATGAAGAGAACACTAATATTAGGCGCAACTAACATTTTCATGAACATTTGTGCATATGCAATGGCTTATACAACCCACTCATCATGGAATTATAAGTTATATCAACTATATCTTATAATCCCTTTCATTTCAAGTGCTCATTGAATATTTTGTTCATCTATAAAGAGATAAGTGTCACGGTAATTACGTATGTTGCTTTTAACAACATAATCTGATTATATGTTACAATTTATCAGTGGAGCTGGGTCGACGTTACTTTCCGCATTGCTCTAGAGTGCTCGACAAATTTCTAGAAGACGATCACCGTGACCTCTTCTTCCTACAAAAAGGAACTCCAGATGAGCAGAAGATGAAAAAGAGACGCTTCTGCGAACTAAAAGACAACGTTCTCAAAGCTTTCAGCAAAGACAAAGCTCAGGGTTGTCGTTCTGGATTTTTCTCTTCTTCTTCATCATCTTCTCCACAGAAAAGTGAACATATGAAACATAGATCTGCAAGTAAATAGAGTTTAAGGCGATTCAGTTTAATGCATGTACAATAGATGTTTACATGAAGGAAAAGGTGAAGGCATAGAATAGTTTGTTTTGACATTTTTTTATGTTCTTTTTAATAATTATATCTGTATTTGTTTCTTCAATGTGTGTGTTTAGGGGGTTACAGATAGATTAATGTTTTTTTTTTAAATTATGTGTAATGTGCAGATGCTCTTTGAGCTTTTTGTTTGTATTGCTTGCACGTCTACAAAAAATGTAGATGCTTCATGTTTCTTTGTGTACATTCCTTCTGTGAAGTATCATAATTTTCTTTATACCTGACTTTGATGTCGTTGATGTTTGAATATAGCTGAATATATAGAATATTCTTTATTGCCTTTTCTGATAATTATTTCATCGTTCTATATCTTTCTTGGTATTTAAATTGACAGAGAAATGCTAATGTTTGTCACAGGGTATTCAGCACAAAGCTCAATTGTGTACTAATTTTCAACATCAAAGGTGTTTTTCAACTAATTTTGAAGCCCATTACTGTCATTGCCTGGAAATGACCATGACAAGTGTAGTGCTTTATACCGAAGAATTTGGGCCGTTGGATGCAAACCTAACAGTGTGGATAGCATGATATGAGTCATATGACACTACGAAGTAAACTCAACTCCTTTGTTCTCAGCTTCAGTGATACAAAGGAGTCAAAGCTCCGGGCCTTAGGTATCCGTGTGTATATATGTATGTGTATATGATATTTTTAATGCTTTCGGTCACTGCTATTGAAATATAGTAGTTATAGTCACACACAGATATATGTATGTACGTACGTATATATAGATACAAATATACATACATATGTGTATGATATACACACATGTATGTATGTGTGTATGATATGTTGCTATTGAAGTAGAGTAGCGTGTATCCATCTCGGGCCATACTAACAGTGATAAGTAAAGAAGATGCATTTGATGATCAAAGCAATCTGTAGCTATTAATGATCATGAGCAGTTCTCTGAAAGCAATTAGATCAGAGTGTGTTTACAGACACCTTCCTGCAACGTCTTTATTCCCCTGTGATTTCAGTCATATATTCGAAAAGAAAGAAAATATATTACTTAAGTCCGAATGTGTTAACTCAGGGAGAAATAGCGATGTAGCAGAAATTAGACATAACCGATCCTTGTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020271412.1	4.5e-214	BTB/POZ domain and ankyrin repeat-containing protein NPR2 isoform X1
Swissprot	E7BQV0.2	8.4e-189	NPR1 homolog
trEMBL	A0A8K0N423	3.0e-199	BTB/POZ domain and ankyrin repeat-containing protein NPR2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G45110.1	55.85	1e-164	576	ATNPR3;NPR3	NPR1-like protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G00170	AT5G45110.1	530	216	7	30	549	37	558	55.85	1e-164	576
AfisC4G00170	AT4G19660.1	532	214	10	33	550	34	552	54.70	8e-154	540
AfisC4G00170	AT1G64280.1	564	299	12	10	548	15	559	39.18	4e-99	358

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00651.28	BTB	Domain	53	133	30.3	3.6e-07
PF11900.5	DUF3420	Family	219	267	40.5	1.9e-10
PF13637.3	Ank_4	Domain	294	335	23.5	5.5e-05
PF12313.5	NPR1_like_C	Family	366	564	271.7	3e-81

Gene Ontology

Accession	Ontology	Name
GO:0042787	P	protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0001666	P	response to hypoxia
GO:0003002	P	regionalization
GO:0005634	C	nucleus
GO:0008219	P	cell death
GO:0009408	P	response to heat
GO:0009536	C	plastid
GO:0009611	P	response to wounding
GO:0009625	P	response to insect
GO:0009682	P	induced systemic resistance
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009817	P	defense response to fungus, incompatible interaction
GO:0019005	C	SCF ubiquitin ligase complex
GO:0009862	P	systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009908	P	flower development
GO:0010016	P	shoot system morphogenesis
GO:0010022	P	meristem determinacy
GO:0010112	P	regulation of systemic acquired resistance
GO:0010200	P	response to chitin
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0030162	P	regulation of proteolysis
GO:0031348	P	negative regulation of defense response
GO:0031625	F	ubiquitin protein ligase binding
GO:0043161	P	proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048827	P	phyllome development
GO:0080185	P	effector dependent induction by symbiont of host immune response
GO:1901149	F	salicylic acid binding
GO:2000022	P	regulation of jasmonic acid mediated signaling pathway
GO:2000031	P	regulation of salicylic acid mediated signaling pathway
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14508	NPR1; regulatory protein NPR1	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network