result

Gene information

Detail information of AfisC4G00558

Location

Gene	Chr	Start	End	Strand
AfisC4G00558	chr4	96225135	96227201	-

Sequences

CDS

Protein

Gene

>AfisC4G00558
ATGACACCTGAAAAAGAAGAAAAGAAGTTGCCATACCCTCTAAACCCTAACTCCTATAACATCCTTAACGAAATAGGAAGTGGAGTTAGTGCAGTAGTATACAAAGCCAAATGCATTCCCCTTAACTCTTCGATAGTAGCCATAAAATCCATTGACCTTGAAAGAGCCAATGCCAATCTCGACGATGTATATCGTGAAGCAAAGGCATTGTCATTACTCTCGCATCCGAATATTCTTAAAGCTCACTGCTCGTTTACTGTGGACAGTAATTTGTGGGTTGTTATGCCCTTTATGAGCGCTGGTTCCTTGCAATCGATAGTAACGTCTGCATTTCCAGATGGTTTATCGGAACAATGTATTGCTGTTATACTGAAGGAGGTGCTTCATGCACTTTGCTATCTGCATAATCAAGGCCATGTTCATCGTGATATTAAGGCAGGAAATATTTTGGTAGATTCGGATGGCTCTGTTAAGCTTGCAGACTTTGGTGTCTCCGCTTCTATTTATGACTCTCGCTCCTCCAGCTTTCCATCTTCCTCCTCTTTTCTCAATGAGTTGGCAGGTGATGTTATAACATAATATAGTTTTTCTTTTGAATCTCTCTTGGTATTCCATACAATGTCTTATCCTGTATATATTATAAGTCACGTTATAGCATATGGTTATCACAATATAACTGGAAATAACTAATTTATATGCAAGCAACAAAGAACTATACTTGTCAATTTTTGAAGTTCTTCAACATTTGCGGCCCTGTTTGGGTTTCCAACTTTAATGCATAAAATTTGTAAATGCTACATAACTAGTCTTTTTGATATCAAAAGTAGTCTATTACAACCAAAATAAGAAAGTTAAATATTGACTCAAACTAAACTATCTGGAAATCTTGAAAGTTAAGGCATAACTGTACATAACCCAAAGTTTCCATAGAACTCAGTCCTTGATACACTTGAATAACATTGTTCATGAATTCAAAACAACACTTAATCTTTTTATTTTTTATTTTTTCCTTTGCTTTAATATGTACAGGCACACCCTACTGGATGGCACCAGAAGTAATTCATTCTCATACAGGCTATGGCATCAAAGCTGATATATGGTCATTCGGAATAACAGCACTAGAATTAGCTCATGGTCGACCACCTCTTTCCCATCTTCCAATATCAAAATCTTTTATGATGAGGTTAACAAATGGACTTAAACTTGAAGACACTCATAGTTGTAAGAGTAGCACTAAAAAGAAGTTCTCAAAAGCATTCAAAGATATGGTAGCTTCCTGTCTTTTACATGATCCTTCGAAAAGACCAACTGCAGATAAACTATTGCGCCATGCTTTTTTCAAGAACTGCAAGTCTTTAGACTACTTTGCCAAGAATGTGCTTAACGGCGTTCCATGTATTGAGAAGAGGCTGGAAAAAGATGCGAGTCTTGAGAAAAAGAAGAGTTTGGAGCCTATTGTGAAGACAAGACGAGTTAGCGGTTGGAATTTTAAAGAAGATGTACTTGAGTTGAGTCCTGTTTTTACGCCTAAAGAAAGAGGAGAGCAAAAGAAAGTCGAGGAGAAGAAAAATGAAGAAGTTGTAAAGGAGAGTTTGGTTCCTGATTTAGTGTATCTTTTAAGCAATTTGGATGTGCAAAAGGGAATGGTTATGAATGTGCTGACATACTGTGAAGGTGGAGATAAAAGTGAAGAGAATGTGAATTATAGGGTGGTTGAAAGAGAGAAACAACTTATGGATGTTGTTGATGAATTGCAGAAAAATGTGAATGATTTGACCATTGAGTTGCAAAGTGAAATGAAGAAGAATGCTATTTTGGAAGAAAAGCTGGAAAGTTACAGAATAAAGAACAATGAAGAAATGTAGGAGTGTACAGTAGCTAATTCCTGTGTTTTCTTTGATTGAAATATGTAAATGGCTTAAATAAAGAGATTAAGCTTCGTACCTTCCTTTCTCGATTGAAAGTTTAGAAGATTACTATTACCTTTGTTCTACTTGAGGTATTAAAGTTGATTGTACCAGCATAGCGTACTACCCGAAAAGTATGGGATACCCGAAAAGTAGGTAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020243739.1	1.4e-173	serine/threonine-protein kinase BLUS1
Swissprot	O23304.1	2.0e-116	Protein BLUE LIGHT SIGNALING 1
trEMBL	A0A445MHK1	1.9e-148	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G14480.1	51.86	3e-126	448		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G00558	AT4G14480.1	484	169	10	9	443	5	473	51.86	3e-126	448
AfisC4G00558	AT5G14720.1	350	141	8	7	341	6	337	50.29	4e-96	348
AfisC4G00558	AT1G79640.1	355	148	7	6	344	5	342	49.01	7e-93	338

Ortholog group

Species	Genes
Allium cepa	g127744.t1
Allium fistulosum	AfisC4G00558
Allium sativum	Asa4G00608.1
Arabidopsis thaliana	AT4G14480.1
Oryza sativa	LOC_Os03g47470.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	19	291	209.1	6.7e-62

Gene Ontology

Accession	Ontology	Name
GO:0000139	C	Golgi membrane
GO:0000287	F	magnesium ion binding
GO:0019898	C	extrinsic component of membrane
GO:0001933	P	negative regulation of protein phosphorylation
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0008217	P	regulation of blood pressure
GO:0008631	P	intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0016323	C	basolateral plasma membrane
GO:0016324	C	apical plasma membrane
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0019901	F	protein kinase binding
GO:0023014	P	signal transduction by protein phosphorylation
GO:0031981	C	nuclear lumen
GO:0032414	P	positive regulation of ion transmembrane transporter activity
GO:0036438	P	maintenance of lens transparency
GO:0042542	P	response to hydrogen peroxide
GO:0043232	C	intracellular non-membrane-bounded organelle
GO:0046777	P	protein autophosphorylation
GO:0048680	P	positive regulation of axon regeneration
GO:0050727	P	regulation of inflammatory response
GO:0050891	P	multicellular organismal water homeostasis
GO:0051645	P	Golgi localization
GO:0060562	P	epithelial tube morphogenesis
GO:0061404	P	positive regulation of transcription from RNA polymerase II promoter in response to increased salt
GO:0070062	C	extracellular exosome
GO:0071476	P	cellular hypotonic response
GO:0090188	P	negative regulation of pancreatic juice secretion
GO:0097194	P	execution phase of apoptosis
GO:1901017	P	negative regulation of potassium ion transmembrane transporter activity
GO:1902456	P	regulation of stomatal opening
GO:2000021	P	regulation of ion homeostasis
GO:2000687	P	negative regulation of rubidium ion transmembrane transporter activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08835	OXSR1, STK39; serine/threonine-protein kinase OSR1/STK39	EC:2.7.11.1	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network