result

Gene information

Detail information of AfisC4G00785

Location

Gene	Chr	Start	End	Strand
AfisC4G00785	chr4	134798888	134800015	-

Sequences

CDS

Protein

Gene

>AfisC4G00785
ATGGCGATAATATATAAGAAGAAACAAAAGAATGAAGTTGACTCGAGTTCACAAGGGAATAGCAATGCCCCTAACAAAGATTATAGTCATATTCGAGCTAAGCGTGGTCAAGCTACAAATAGTCACAGTCTTGCAGAGAGAGTAAGCCAAAGATACATTTTCAAATAATCAAATATTCATGCATGTCGGTAACATTTTTTATCAAATCTTTCCCAAAATCGTAGGTAAGAAGAGAAAAAATTAGTGAAAGAATGAAACTTCTCCAAGATATTGTTCCTGGCTGTAACAAGGTACATACAATAATTTTGTTATACAATTCAAGATGTTATTAGTTCAAGTTTATCGCTAATATGACAGTGTTATCCTAGATTACTAGGAAAGCAGTCATGCTTGATGAAATAATAAATTATGTACAGTCCCTGCAAAAGTAAGTTGAGGTAAATCTTCATTTTGTATAATGGTGAATTTCGATATAAGAACTAAATGGAAGTGTTCTGATTTTACAGTTTTTATCAATGAAGCTGGCTACTGTGACTCCGGAAATCAATATTGGTATGGAGAAGAAATTTGCAAAAGAAGCAAGAGTAATAAATACATCCTGTATGAACATATAATATATTTATCGTCTATATAGTATATACTTATTTCATAGTCCTTTTTCTTTTAGAATATGCATTCAAGATATGAGAATTCTACGTATAATGGACATTTACAAGAAATGGTTATTCCCGATGTTCGTTTGCAATCGAGAATGGAAATTCTGAGTGCATACAATAACATGGATTTTCTCCGAACAGCAAACAACTATCAGCTTCCAGATTTGAGTCATGTTATCATGATTCTTGGTCGTGTGATAACATGACCATAACTATCGTTGAACCTGCCAGGTGAGCGCGCCCAACAAGGCAAAGGTCTAATACAAAATACATACCATCGTCTTCTTCCTCAGATGACCCATCGCAAGTAATTGCTGGCACTGTCGACGTGGACGAGGTCAGAGCTGAAGTTCTCAGCCCATTCTTAGTAGGCGGAGGTGCTGCGGGGGGAGCTGGAGGTGTCGTCGGGGAGAGAGACGTTTTCGGAAGAGGAGGGAGCTCGCGGTGGAGCTCGACTTTGCTGGAATGGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256376.1	5.6e-33	transcription factor bHLH74-like isoform X2
Swissprot	Q6NKN9.1	2.7e-32	bHLH transcription factor bHLH074
trEMBL	A0A5P1FCI0	4.0e-33	BHLH domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G10120.1	55.00	9e-38	153		basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G00785	AT1G10120.1	160	58	4	6	160	176	326	55.00	9e-38	153
AfisC4G00785	AT1G68920.3	181	83	2	8	178	279	457	47.51	4e-36	148
AfisC4G00785	AT1G68920.2	181	83	2	8	178	280	458	47.51	4e-36	148

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	40	88	32.5	5.4e-08

Gene Ontology

Accession	Ontology	Name
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0001228	F	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0006366	P	transcription from RNA polymerase II promoter
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046983	F	protein dimerization activity
GO:0009637	P	response to blue light
GO:0009739	P	response to gibberellin
GO:0009911	P	positive regulation of flower development
GO:0048446	P	petal morphogenesis
GO:0048767	P	root hair elongation
GO:1902448	P	positive regulation of shade avoidance
GO:2000488	P	positive regulation of brassinosteroid biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network