result

Gene information

Detail information of AfisC4G01061

Location

Gene	Chr	Start	End	Strand
AfisC4G01061	chr4	191336851	191339965	+

Sequences

CDS

>AfisC4G01061
ATGAACAATTTCATTGCTTTATTCATAACAACTGCATGTATTTTATCAAAAATTGTGTGTGCAAAAATTGAACCAACTCTGCTTGATTGTGGTTCTGATTCCATTACTAAAGTCGATGGTCGAAAATGGGTTGGTGATTCAATTGCCAATGACAATAAAAATTACACTTTGAGTTCATTGGGAACTGTTACTTCAACTAAACTAAGTAGTGATGATTCAATATACAAAGACTTGTATAAAACTGCTAGAGTCTTCAACTCTTCTTCAAACTACAATTTCAGTGTTATTCCTATGCTTTATTGCATTAGGCTTCACTTCTCGTCTTTCCAATCTGATAGCTTCAACTCAAATGGCTCTATCTTTGATGTATCTGCCAATGGTATCAAACTGGTTTCAAAATTCAATGTCTCTGAAGAAGTTTCCTGGAAAAATTCAGTCACTAATTCAAGTACTTCTTATATAATGAAAGAGTACTTTGTTAACATCAGCTCAAATGGGCTTCTCCTTGAGTTTGTTCCAATTCCTACCTCATTTGCTTTTGTTAATGCCATAGAAGTCATCCCAATACTCGACACTTTATTTGAGGATTCAGTGAATAAAGTGGGTGGTTATGTAAATAATTATTCATTAGACCTTACTGATCGAGGAATTGAGACAATGTATAGATTGAATGTAGGAGGACCAGCACTAGACTCTGATATAGACAACGTTCTACATAGGAGATGGGAAACCGATGAAAAGTACATGTTTAGCTTAAATGCAGCAACAGAAATAAGTAACAAGTCAAATATAAGCTATGCATCTCCTAATGAGTTCTCCATTGCACCTATTCAAGTATATGAAACTGCAAGAATCATGACAAACAATGATGTAGTAGAAAGAAGATTCAACTTGTCATGGCGCTTTGTAGTCGACTCAAACTTCGAATACTTAGTTAGACTGCACTTCTGTGAGTTAGCCTACGACAAGGCAAACCAGAGAGACTTCAAAATCTACATAAACAACAAAACAGCAGCTGAAGATTATGATGTCTTCCTCAAAGCTGGAGGCATGAATCAAGCTTATCATGAAGATTATTTCGATGTTGCTCAAAGCGTAGACACTCTGTGGGTACAGCTAGGGCCAGATTCTATGGTAACCAACTCAGGCACTGATGCACTACTTAACGGCGTAGAAATATTCAAGCTAAGCAAAAATGGAAACTTAGCCCATGCATTCAGGGGCAGTGCTAGTGAAGAAGGTGTCAAAAACAAGAAGCATAAGAGCAAAACAATGTACATGGCAATCGGCCTTGGTGCATTCTCATTAGTAGGCGTATCACTAGCTTCGGCATTCATATTCTTTGTATGCCTTCAAAAGAAGAACAAAAGCACAATTTTAGACAAAGATCAACCTCCGGGTTGGCACCCGTTATTTCTCCACGAGCTGATGGGGAGCACAAAAAATGCACGAGCTTCTTCAAAGCCAAATTTCACGGCAAGCAACTCAATGGGAAGTCATAGAGGAGGAAAAATGTTCACTTTACAGGAAATCAAAGAAGCAACGAGGAACTTCGACGAGTCCTTAATCATAGGCAACGGAGGATTCGGAACGGTGTACAAAGGCAAAATCGAACAACTAGGGCTCGACGTAGCGATTAAGAGGGCGAACCCCATGTCTCGACAAGGCCTAGCAGAGTTCGAAACTGAGATAGAGATGCTATCAAAACTAAGGCATAGACATCTAGTCTCCATGGTAGGCTATTGTGAGGAGAAAAACGAAATGATTCTGGTGTACGAGTACATGGCTAATGGCACTCTAAGAAGTCATTTATATGGCACCAACCTTCCTAGTATTTCATGGAAGAAGAGAATAGAAGCATGCATAGGCGCTGCACGTGGGCTGCACTACCTTCATACTGGTGCTGATAGGTGTATAATACATAGAGATGTTAAAACCACAAACATATTGCTCGATGAGAATTTCGTGGCAAAGATGGCGGATTTTGGGTTATCAAAGGCGGGCCCAACGCTTGATCATACCCATGTGAGTACAGCTGTTAAGGGCAGTTTTGGGTACCTTGACCCAGAGTATTTTAGGAGACAGCAGCTGACGCAGAAGAGCGATGTGTACTCATTCGGCGTTGTCTTGTTTGAGGTTGTTTGTGCAAGGCCGGTAATTAATCCCACATTGCCAAAAGATCAGATAAATTTGGCTGAATGGGCAGTTAGGTGGCAGAGGCAGAGGTCACTGGAGAGTATAATGGACCCGAGGCTTGAAGGAGACTGCTCGATAGAGTCTTTGAAGAAGATTGGAGAGATAGCGGAGAAGTGCCTTTTGGATGATGGAAAGAATAGGCCGAGTATTGGTGAAGTGCTGTGGCATTTGGAGTATGCATTGCAGTTGCATGAAGCTTATAGTAAGCATGAAGACGAGAGCTCCTTTGCTGATATGAGCTTTGGTTTGATTAGGGGTAGTGAAGGTGAAGGTGAAGGTGACTGCAATGGTAACTTTGAGGATGATGCCATTAGGCCTCAAGGGAGGTGA

Protein

Gene

>AfisC4G01061
AATAAACTCCAGAAGTGTGTATCAAGTTCTCTTTTCAGCTTCTTTAATATCTTTATTGCTATCTGCATTATAGATTTACGCGACACATTCTGTCCTTTTCCAAAATTTCCATTGCTAAAAAGCTGGATTGAGGCATAAAAATCCGTCCTTTGCAGCAAAGGTGTCTCCTTGTACATTCTGCATTGTGTTTGGAGCTCATTTGAGGTCTTAGTTTATCAACCTTTAGTTGGGTTTTTGCTATTGTTCATGGATACCGCTCTGTTCGTCAGATCTTGTTATATATGTGGCCTATGATTAAGCTTTCAGTTAGTGAAATTTGAAGTACCAAAAGCGTGGCACCCCAAATTTGTGCAAGAAATGAACAATTTCATTGCTTTATTCATAACAACTGCATGTATTTTATCAAAAATTGTGTGTGCAAAAATTGAACCAACTCTGCTTGATTGTGGTTCTGATTCCATTACTAAAGTCGATGGTCGAAAATGGGTTGGTGATTCAATTGCCAATGACAATAAAAATTACACTTTGAGTTCATTGGGAACTGTTACTTCAACTAAACTAAGTAGTGATGATTCAATATACAAAGACTTGTATAAAACTGCTAGAGTCTTCAACTCTTCTTCAAACTACAATTTCAGTGTTATTCCTATGCTTTATTGCATTAGGCTTCACTTCTCGTCTTTCCAATCTGATAGCTTCAACTCAAATGGCTCTATCTTTGATGTATCTGCCAATGGTATCAAACTGGTTTCAAAATTCAATGTCTCTGAAGAAGTTTCCTGGAAAAATTCAGTCACTAATTCAAGTACTTCTTATATAATGAAAGAGTACTTTGTTAACATCAGCTCAAATGGGCTTCTCCTTGAGTTTGTTCCAATTCCTACCTCATTTGCTTTTGTTAATGCCATAGAAGTCATCCCAATACTCGACACTTTATTTGAGGATTCAGTGAATAAAGTGGGTGGTTATGTAAATAATTATTCATTAGACCTTACTGATCGAGGAATTGAGACAATGTATAGATTGAATGTAGGAGGACCAGCACTAGACTCTGATATAGACAACGTTCTACATAGGAGATGGGAAACCGATGAAAAGTACATGTTTAGCTTAAATGCAGCAACAGAAATAAGTAACAAGTCAAATATAAGCTATGCATCTCCTAATGAGTTCTCCATTGCACCTATTCAAGTATATGAAACTGCAAGAATCATGACAAACAATGATGTAGTAGAAAGAAGATTCAACTTGTCATGGCGCTTTGTAGTCGACTCAAACTTCGAATACTTAGTTAGACTGCACTTCTGTGAGTTAGCCTACGACAAGGCAAACCAGAGAGACTTCAAAATCTACATAAACAACAAAACAGCAGCTGAAGATTATGATGTCTTCCTCAAAGCTGGAGGCATGAATCAAGCTTATCATGAAGATTATTTCGATGTTGCTCAAAGCGTAGACACTCTGTGGGTACAGCTAGGGCCAGATTCTATGGTAACCAACTCAGGCACTGATGCACTACTTAACGGCGTAGAAATATTCAAGCTAAGCAAAAATGGAAACTTAGCCCATGCATTCAGGGGCAGTGCTAGTGAAGAAGGTGTCAAAAACAAGAAGCATAAGAGCAAAACAATGTACATGGCAATCGGCCTTGGTGCATTCTCATTAGTAGGCGTATCACTAGCTTCGGCATTCATATTCTTTGTATGCCTTCAAAAGAAGAACAAAAGCACAATTTTAGACAAAGATCAACCTCCGGGTTGGCACCCGTTATTTCTCCACGAGCTGATGGGGAGCACAAAAAATGCACGAGCTTCTTCAAAGCCAAATTTCACGGCAAGCAACTCAATGGGAAGTCATAGAGGAGGAAAAATGTTCACTTTACAGGAAATCAAAGAAGCAACGAGGAACTTCGACGAGTCCTTAATCATAGGCAACGGAGGATTCGGAACGGTGTACAAAGGCAAAATCGAACAACTAGGGCTCGACGTAGCGATTAAGAGGGCGAACCCCATGTCTCGACAAGGCCTAGCAGAGTTCGAAACTGAGATAGAGATGCTATCAAAACTAAGGCATAGACATCTAGTCTCCATGGTAGGCTATTGTGAGGAGAAAAACGAAATGATTCTGGTGTACGAGTACATGGCTAATGGCACTCTAAGAAGTCATTTATATGGCACCAACCTTCCTAGTATTTCATGGAAGAAGAGAATAGAAGCATGCATAGGCGCTGCACGTGGGCTGCACTACCTTCATACTGGTGCTGATAGGTGTATAATACATAGAGATGTTAAAACCACAAACATATTGCTCGATGAGAATTTCGTGGCAAAGATGGCGGATTTTGGGTTATCAAAGGCGGGCCCAACGCTTGATCATACCCATGTGAGTACAGCTGTTAAGGGCAGTTTTGGGTACCTTGACCCAGAGTATTTTAGGAGACAGCAGCTGACGCAGAAGAGCGATGTGTACTCATTCGGCGTTGTCTTGTTTGAGGTTGTTTGTGCAAGGCCGGTAATTAATCCCACATTGCCAAAAGATCAGATAAATTTGGCTGAATGGGCAGTTAGGTGGCAGAGGCAGAGGTCACTGGAGAGTATAATGGACCCGAGGCTTGAAGGAGACTGCTCGATAGAGTCTTTGAAGAAGATTGGAGAGATAGCGGAGAAGTGCCTTTTGGATGATGGAAAGAATAGGCCGAGTATTGGTGAAGTGCTGTGGCATTTGGAGTATGCATTGCAGTTGCATGAAGCTTATAGTAAGCATGAAGACGAGAGCTCCTTTGCTGATATGAGCTTTGGTTTGATTAGGGGTAGTGAAGGTGAAGGTGAAGGTGACTGCAATGGTAACTTTGAGGATGATGCCATTAGGCCTCAAGGGAGGTGACTTGTGGGTGGTTAACTTGCATCTTTTATTGACTGCGTTGTCCTTGGCATAGGAAGGGGAAAAAAAGATTATGTGTAGTTATGTTGTATTAATTTGTTTATCAATATCTCCTTGATTTTTTTGTTTGAAAGGATTAAGATATCAAATTTCATTTGCATGTGATTCTTAATGTGTTATGTGTACGGTTTTGTACAAACCAGGTAATTACAGATTTAATGTAGTTCAATTATTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010926938.1	0.0e+00	probable receptor-like protein kinase At1g30570
Swissprot	Q9SA72.1	4.3e-250	Probable receptor-like protein kinase At1g30570
trEMBL	A0A6I9RIR8	0.0e+00	probable receptor-like protein kinase At1g30570

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G30570.1	57.89	0.0	913	HERK2	hercules receptor kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC4G01061	AT1G30570.1	805	302	16	21	809	28	811	57.89	913
AfisC4G01061	AT5G54380.1	816	399	18	3	800	6	791	45.22	638
AfisC4G01061	AT3G51550.1	840	429	19	9	825	19	842	44.29	634

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF12819.4	Malectin_like	Domain	28	395	132.0	2.5e-38
PF07714.14	Pkinase_Tyr	Domain	524	785	160.2	5e-47

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0004674	F	protein serine/threonine kinase activity
GO:0009506	C	plasmodesma
GO:0009705	C	plant-type vacuole membrane
GO:0009723	P	response to ethylene
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009791	P	post-embryonic development
GO:0009860	P	pollen tube growth
GO:0009941	C	chloroplast envelope
GO:0010483	P	pollen tube reception
GO:0016324	C	apical plasma membrane
GO:0030308	P	negative regulation of cell growth
GO:0043680	C	filiform apparatus
GO:0046777	P	protein autophosphorylation
GO:0051510	P	regulation of unidimensional cell growth
GO:0051924	P	regulation of calcium ion transport
GO:0080147	P	root hair cell development
GO:0090404	C	pollen tube tip
GO:0097275	P	cellular ammonia homeostasis

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network