Detail information of AfisC4G01076


Location
GeneChrStartEndStrand
AfisC4G01076chr4194141805194163243+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020240720.13.6e-217protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1
SwissprotQ84JF5.11.6e-182Plastid-encoded RNA polymerase-associated protein 7
trEMBLA0A4S8JRD81.4e-210SET domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G20130.167.030.0 653PTAC14;TAC14plastid transcriptionally active 14

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag135118.t1
Allium fistulosumAfisC4G01076
Allium sativumAsa4G00786.1
Arabidopsis thalianaAT4G20130.1
Oryza sativaLOC_Os05g50980.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00856.25SETFamily9031377.41.5e-21
PF09273.8Rubis-subs-bindDomain35145528.52e-06

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000427Cplastid-encoded plastid RNA polymerase complex
GO:0006355Pregulation of transcription, DNA-templated
GO:0009416Presponse to light stimulus
GO:0009508Cplastid chromosome
GO:0009534Cchloroplast thylakoid
GO:0009658Pchloroplast organization
GO:0010027Pthylakoid membrane organization
GO:0016279Fprotein-lysine N-methyltransferase activity
GO:0018026Ppeptidyl-lysine monomethylation
GO:0042793Ptranscription from plastid promoter

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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