result

Gene information

Detail information of AfisC4G01287

Location

Gene	Chr	Start	End	Strand
AfisC4G01287	chr4	230486738	230488080	-

Sequences

CDS

Protein

Gene

>AfisC4G01287
ATGGTACCTCTAGATTGGAATGCACGGATGAAAATAGCATTACGTTTTGCCCATGGATTGGAATGTTTGCATCTTAAGCACAAACCACCAGTTATACATAGAGACCTGAAATGCTATAATATATTTCTTTGGGTGAGTTACCATGCAAAATTATCAGATTTTGGCTTGGCTAAAGAAGGACCAGCTGGTGATAAACCTCATGTTAGAACAGCTATTGTAGGAACCGATGGATATATTACCCCTGAATATGCTAGTACAAATAGATTGACTGCTAAATTTGATATATACGGTTTCAAGGTAGTGCTTTTGGAAATTATTACTGGAAGAGGGAAGTTGATGATTCCAGTCAGGCAAAAATGAAAGAGCTTGTTGTTTGGGCAATACCATACATAGAGCATGAGAATTTTTTAACCCATATAACAGATCCTTTGCTTCAAGGCAAGCATTATAATGAAAAGAAGATATTCGTATTCGACTCGAGCGGTGGCTCGTTGACTGGTATAAGGATGCTGAAATGACTGGAGAAGCTTCGACTCAACCTTGAGGACAAGGTTGTTTTGAAGGAGAAGGGAAATGTTATACCTAGTTTTAGTTTCAAGAAAGCAAAATGCAGAAAACTGCCAATGTCAGGATTCAGGCCATAGAACATCAGAAATGGTACCAGAGTTCACCGGAGGTAGAGTCTGCAGTGGAGAAAAGAAGATGATTGACATTGCTCCAGAAAATGAAGCTTCGGGGGGTGAAGAAAAGAGATATCAGTTGTGAAAGTTTTGTGCATGTGCACGTGCACAAGCATGCATAGAAGTATTTGGGCCTGCATTGTATTTATTATTAATTAATTCAGTAACTAGAGTTAATTAAGGTTAGTTTAGAGCCGTTATAATTAACTCTCTATATACATACGTGGGCATGTATGCATGTAAAGGGTGTGAGCAATATTTAGAAAACTTCAAAATCATTTCTGTTAATTTTCTGTGTGTATCTTCTTATGCAAATCTATCTGCATTTCACCCTTCTTACTTCCTGTGCATTCTCACTTTCTTTATTTCAATTTTCTTGTGCTTGAAATCTTTAATCTCCCTCGCCATAATCAATTCTACAACAACAGATGCTCACTCCTGTTTTTGTAACTCACAATCCCTTTCTTCCTGAACTCATCAACTCCAATTCAATTATAAACAACTACAACAGTCACTTGTTTCATCATCACAACAGCAAGCATTTCTTTCTTTTATCATGACCATAACCAGAAATCAAGCAAAAGATAAAGGGCTATCAGTATAACCTTGCAAACCAATGAATATTATACTTTTTTTCTAGTCTCAACCAGTGATTGCAAAAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_019436245.1	5.6e-34	PREDICTED: probable serine/threonine-protein kinase PBL5
Swissprot	Q0WRY5.1	5.4e-34	PBS1-like protein 7
trEMBL	A0A4P1RQH3	4.0e-34	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G07870.1	65.42	5e-36	145		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G01287	AT1G07870.2	107	37	3	109	198	304	65.42	5e-36	145
AfisC4G01287	AT1G07870.1	107	37	3	109	198	304	65.42	5e-36	145
AfisC4G01287	AT5G02800.1	107	35	3	109	168	274	67.29	6e-35	142

Ortholog group

Species	Genes
Allium cepa	g512564.t1
Allium fistulosum	AfisC4G01287
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	11	109	70.8	1e-19

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0046777	P	protein autophosphorylation
GO:0071323	P	cellular response to chitin
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network