result

Gene information

Detail information of AfisC4G01288

Location

Gene	Chr	Start	End	Strand
AfisC4G01288	chr4	230488084	230489664	-

Sequences

CDS

Protein

Gene

>AfisC4G01288
ATGACTAATGTCCTACTTTGCTGCTGCGTTATTAGCGATGCTCTAAGCCATAACAATATTCAATACACACTTAATAAGTAATAATTAACTTCTTTTTTGTTCATTAACGTCAAATAGACACCCAATATTCGGTTGATCAATACATATGTGTGTGTTAACTTTGGTTTATATATGTAAATTCATATGCTATATAATATAATATTATATATATATATATAGCTTACATATTACATATTAATTTACATGTACAAATTAAGGCAGACTTACCCGAGTTTCTAAAACTCAGGCAAGTGAGGTACTGACACCTCTCCACCAGCTAGCAAGGAGTAGCATGTTTGGCAAATAAGGTTCATGCCCAACTTTGTTAGGAATGCTCTAAGCCATAACAATATTCAATACACACTAAAGCAATAAATAACTTTGGTTTTCTCTTTGTGTCCGTTAAGCTTTCAAAACAGAAAGTATGATAACATAAAAGTATATTTTAAAACGCAATTTGATTCAATTGGAAAAATAAACAATTTGGAATTAATTCAGTCTAATTGTTTGTTTCTAACATAGTTTTACCTTAAAGTTGACTAAACACTCACCCTTGAATAAGACAAATTCTCTATAAAAAAAATTAGAAACGAAATAGGTAAATGTGAATATAGATGAAGGTTTTCTGTTATCGTTTTCATTCAGCTCATGTAGTTTTTTTTTTGCTGTAACGTAAGTGCATTCAGGACATATGATTTCAGTTTCTCTTTAATATGAAATACATTAAAAACTGCATTTTTGAAGTTTACTATAATATCAATATTTTTAATTTTGAATAAAAGAAAACATAGAATTCAATAATATCTTCTCTTACATAATCAAGATTATAACTTCTACACGAAGTTCAAAATAAATATTGATCCATTTGCATTTTTGAAAGCAATTTCTTCAATTAAATTGCGATATTCTAGTTTCCAGTGACAGGCTTTCAAATTGAAATTATTGCTAATTCAATCAACCATTCTTGTCTCCGATTTGTTTAAAATATCTTTACACCGGTTTCGACTTATAAAACGGCATTCTAACAATGGAATCGGCATCACCCGAATTAATAATGTTAGATATTGCTCTGATGCATGTCAATCAAAGCATTGGAATGCAAGTCATAAATTGAAATGCAAGCCGTCAATCCCTTTGAAGGATTCACAAAATTCATGTTTTAAAGAAGTCATTCATCCAGACAACTTATACAACTTAATAGAAGATGATAAGAGAAATCAGGCCAGTGGGAATTTAAAATTGGCTGCCGCTTGCCATAATTACGGTGAACATCATTTGTTGAAAAGAGGTCGATTTGGTCCAGTTTATAAAGGAATTTTAAAGCAGATTGCTCAAGTTGTGGCTATAAAGAAGCTTCGTAATAATGCCGACGGCCGTCATGGTTTACAAGCATTTCTTACCGAAGCGAGGATGTTAGTCGAGCTTCATCATCCTAACCTTGTTAATACCATTGGATACTGTGTCGATCCTTTTGAAAGACTTTTAGTATTAAAGTACATGCCTCTTGGATCACTGGATGACCATCTCTTCAGATGTAATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009798942.1	1.0e-21	PREDICTED: serine/threonine-protein kinase PBS1-like
Swissprot	Q1PDV6.1	4.3e-22	Receptor-like cytoplasmic kinase PBL27
trEMBL	A0A1S4C8T9	7.2e-22	serine/threonine-protein kinase CDL1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G76370.1	55.10	4e-23	104		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G01288	AT1G76370.1	98	41	2	85	182	67	161	55.10	4e-23	104
AfisC4G01288	AT5G18610.2	97	40	1	85	181	75	169	56.70	6e-23	103
AfisC4G01288	AT5G18610.1	97	40	1	85	181	75	169	56.70	6e-23	103

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	98	182	58.3	6.2e-16

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0002229	P	defense response to oomycetes
GO:0004674	F	protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0007166	P	cell surface receptor signaling pathway
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0046777	P	protein autophosphorylation
GO:0071323	P	cellular response to chitin
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network