Detail information of AfisC4G01438


Location
GeneChrStartEndStrand
AfisC4G01438chr4265638086265652026+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264250.12.6e-151LOW QUALITY PROTEIN: probable WRKY transcription factor 2
SwissprotQ9FG77.11.1e-90WRKY DNA-binding protein 2
trEMBLA0A5P1EVT36.1e-142WRKY transcription factor 2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G56270.139.972e-108 389ATWRKY2;WRKY2WRKY DNA-binding protein 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag81932.t1
Allium fistulosumAfisC4G01438
Allium sativumAsa4G01296.1
Arabidopsis thaliana
Oryza sativaLOC_Os08g38990.1; LOC_Os08g38990.2; LOC_Os08g38990.3; LOC_Os08g38990.4; LOC_Os09g30400.1; LOC_Os09g30400.2; LOC_Os09g30400.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03106.12WRKYDomain28834482.91.3e-23
PF03106.12WRKYDomain45351087.45.3e-25

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0008270Fzinc ion binding
GO:0009409Presponse to cold
GO:0009611Presponse to wounding
GO:0009651Presponse to salt stress
GO:0009863Psalicylic acid mediated signaling pathway
GO:0009941Cchloroplast envelope
GO:0009961Presponse to 1-aminocyclopropane-1-carboxylic acid
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0044702Psingle organism reproductive process
GO:0070370Pcellular heat acclimation
GO:1990837Fsequence-specific double-stranded DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K18835WRKY2; WRKY transcription factor 2EC:- Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.