Detail information of AfisC4G01515


Location
GeneChrStartEndStrand
AfisC4G01515chr4279859958279895455+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263972.11.4e-135protein tesmin/TSO1-like CXC 5, partial
SwissprotQ9SZD1.14.4e-97Protein tesmin/TSO1-like CXC 5
trEMBLA0A5P1FLR42.8e-133CRC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G20110.143.381e-106 384Tesmin/TSO1-like CXC domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03638.12TCRDomain9813341.79.3e-11
PF03638.12TCRDomain18121546.52.9e-12

Gene Ontology
AccessionOntologyName
GO:0000122Pnegative regulation of transcription from RNA polymerase II promoter
GO:0005515Fprotein binding
GO:0000794Ccondensed nuclear chromosome
GO:0000785Cchromatin
GO:0001046Fcore promoter sequence-specific DNA binding
GO:0051726Pregulation of cell cycle
GO:0004181Fmetallocarboxypeptidase activity
GO:0046872Fmetal ion binding
GO:0005700Cpolytene chromosome
GO:0007307Peggshell chorion gene amplification
GO:0008340Pdetermination of adult lifespan
GO:0009934Pregulation of meristem structural organization
GO:0010008Cendosome membrane
GO:0010082Pregulation of root meristem growth
GO:0030317Psperm motility
GO:0030849Cautosome
GO:0031523CMyb complex
GO:0048444Pfloral organ morphogenesis
GO:0051302Pregulation of cell division
GO:0070176CDRM complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K21776LIN54; protein lin-54EC:- Cellular senescenceko04218

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.