Detail information of AfisC4G01898


Location
GeneChrStartEndStrand
AfisC4G01898chr4359181213359214476+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020245174.11.0e-239calcium-dependent protein kinase 18 isoform X2
SwissprotQ0D715.12.1e-226OsCDPK5
trEMBLA0A5P1FQ637.3e-240Calcium-dependent protein kinase 28-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G66210.172.270.0 816CPK28calcium-dependent protein kinase 28

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain78338225.28e-67
PF13499.3EF-hand_7Domain38544738.97.6e-10
PF13499.3EF-hand_7Domain46751938.41.1e-09

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005509Fcalcium ion binding
GO:0003779Factin binding
GO:0006952Pdefense response
GO:0005773Cvacuole
GO:0005829Ccytosol
GO:0004683Fcalmodulin-dependent protein kinase activity
GO:0035556Pintracellular signal transduction
GO:0005516Fcalmodulin binding
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0005885CArp2/3 protein complex
GO:0030041Pactin filament polymerization
GO:0009507Cchloroplast
GO:0009651Presponse to salt stress
GO:0009738Pabscisic acid-activated signaling pathway
GO:0009825Pmultidimensional cell growth
GO:0009931Fcalcium-dependent protein serine/threonine kinase activity
GO:0010090Ptrichome morphogenesis
GO:0010119Pregulation of stomatal movement
GO:0010150Pleaf senescence
GO:0010286Pheat acclimation
GO:0010359Pregulation of anion channel activity
GO:0018105Ppeptidyl-serine phosphorylation
GO:0046777Pprotein autophosphorylation
GO:0080092Pregulation of pollen tube growth

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13412CPK; calcium-dependent protein kinaseEC:2.7.11.1 Plant-pathogen interactionko04626

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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