result

Gene information

Detail information of AfisC4G01902

Location

Gene	Chr	Start	End	Strand
AfisC4G01902	chr4	360070936	360079707	+

Sequences

CDS

Protein

Gene

>AfisC4G01902
ATGACAGCAATGAGTTTACCACCTGGGTTCAGATTTCACCCAATCGATGAAGAACTCGTTGCTTATTATCTAAAAATAAAGATCAAGGCAGAAATACGGAGTTGGAGGTTATTCAAGAAGTCGATCTTTACAAATGTGAGCTATGGGAGTTATAAGGTGATTGTTTTGTATTTTTCTAATTGGTGAACTGTAAAGCTATACATTGCTTGTATCGGCTATTCAAGTATATTTATAGGTTGTACTTTAAACTGTTAAATTAACTACATTAAAATTAAGAAGCATATTATAATTACAATGCAACTATATGATTGTAAAGAAGTTATTCTTACCAAGCAAAGACTCGGAGTGGTTCTTCTTCAGTCCTATAGATCAAAAATACCCAAATGAATCAAGGACAAACCTATCAACCCAAGCAGGATATCGGAAAGCTACAGGAAAGGATTGAAAAGTAATTCACAAAAAAGAGTTCGAAAATACCCAAATGAATCAAGGACAAACCGATCAACCCAAGCAGGATACTGGAAGGCTACAGGAAAGGATTGAAAAGTAAATTCAAAAAAAAGAGTAGTCGGCACAAATAAATTTAGTGTACTACAGAGGAAGAGCTCCTCATGGCTCAAGGCTAACTGATCATGAATGAATATCAACTCGATGAAAATGAATGTGAGTCTCCTTCTGGTTTACAGGTAACATGAAATAAGTCAATAATGATATGAAAGAATATAACATGATAATAGCTATTTGTCCAAGTTCCATATCCAGCAATGCCACGTGACGGTTACTTACACGCGCGCGCGCACATATTCTCTCAGTCAGTCTACAACTAAAATACACTATGCCACATGACAAAACCAGTTTTTATATTCTATGCATGAAGATGTTACTAACCAAAAGGCTTATATCATATAGAAAAATGCATTCTTCTGTACGTGTACTCTACATCATGTGCTCATTTAGAATCGGGTATATATATATAAAACCGCATATATTCAATTGCTACATATTGGAAATCCATTCGTACATAGAATTGCATTCTCTTGAAAATTTAATTATTTGACATATTAAATAGTTTAACTGATTGTATTTAATTTCATTAAGTACTATAAAGTGCAGTACTCATGTCCATATTAATGTTTGATCGCATATGGATTTTGTAGAATTAAATTAGTGCATATATCATTAAGCTGAACTACGCATGTGATCGTATATCTAATATGACATAAGCACGTTAATTATTCACAGTAATCACTATAGAGCAAAGATTAAACATGGAAACGGAAAGCTTACAAAGAAACACCACATGTAAAATTAAAGAACTCTGCATTGTACACTTTCAGATTTATATAAAACTGTAAAAATAACGTTTGCCAAAATTTTAAAACTCGTTTAGTGATACAACTCTGCACGAGAACAATTATCAATTCAATTGCCACTATTTGCATACCAAACAAGTTAAAAATGATTTTATTGCATATTCTGTGTAACTTGATATCAGTTATACAAATGCACAAACCATTAACATTCGGCATCTTATGGTATATTTTCTTATCATCGACCAATGGTTGTACTGCAAAGTAAAAGAAATCTACAATATTCAGGGCTGGAAATTTAACATGAAAGCCTATATAGTCATCTAGTGCATTTTAGAAATATTTGCTCTGCAATATAAAATTATTTTTTGTGTTAATTCTCTTTCTTCATAGCAACATACAGAAGCAGTCATGGTTCCATTACAATCCTATATCAAATGGGGGAAGAAAGGAACAAAACAACAGTTGCAATAACAGATTAAGGTAATGCACAATATATTAAAAATCAAAAGTATCACACAATTATTCAAACAAAAATTAGTGTCGGCTGTTCACATGTTATGGTATGAATAGGCAATGATTGATTTTCACCATTAATTTGTTCAAAAATTGTGAAAAGGCATCTATTGTGCACCCAGTATCCATGACTGCTCCAAGAGGATGCACCTTATCTAATTAGCCAAACATCAAAATCATATAATCATTGATTATGAGATGTAATTATCAATCATATATACTTAAAAATTAACTATATAAGAACCTTGAAGTGGCAAAGGGTCTTCCATGTAGCATTGGAAAGTGACTTAGACTGCTAATGTACTGCTCTTTTCCTTGGATCTCATTTGCTTGTTCACCGATAACTGAGTTAAGCATATAATACATTAATATAATATCCAATTTTACTGCAATATTACTTGATATGGAAAATTATACAAATATATAAATACCTTGACCAGAATCATCAATCTTTTTACTTCTATACATCTATCGATTAAGCAAAAAGGAATGAGAAAGAAAGTAAGTTAACCAATTAGGCAACATAGTTAACTATATACCGTAGAGACATTTTTTAATTAGTAATTACCTGTAAGTGACTCTTGACATGAGCAATACTAAGTCCTTTAACATTCATCATCTGTAAAACTAGCTTTGGAGTTGCTCCTGCAACAACGGCAGAAGCGACAACATAGATAGCAATTCAACAGGGACTATAAAGAGGCATACGGGAGGTGACTGTAGATGGGAGGCGGTTCAGTTGGCAAATGCCCGAGATGCCCCTCTAGGGCTGAGTCATTTCAGGCTGCTGAAGAGGTTGGGGTATGGGGATATTGGAAGTGTGTATTTGGTGGAGCTTAGGGGCACTGGGGCATACTTTGCAATGAAGGTGATGGATAGAGTGTCCCTTGTGAGTAGGAATAAGCTGCTTAGGGCGCAGACCGAGAGGGAGATTCTGGGCTTGCTGGATCATCCCTTTTTGCCGACTTTGTATTGCTACTTTGAGACGGAGAAGTTCTACTGCCTTGTGATGGAGTATTGTAGTGGGGGGAATCTGCATTCGCTTAGGCAGAAGCAGCCTAGCAAGTATTTCACTGAACAAGCTGCCAGGTAATTGTGCCATGACAAAAATTAATCTTTTAATAGGAAAAATCTTTGAGTCTCTGTGTACATGTGATTAAACAAATGAGCTATATGAATCTGTACCATTGGTACAGCTTTTTAACTGTACGTCTGGAGCAAATTATGAACACCTAAACAAATTCTATATTGATTATCATACATGATTAAAAGTACTGTAAAAAGAAAAGAAGAAAATTGTACAAGGGACATGATTAGCCAGGGAAAGAACCTAAAAATAACTATTAATAAGGAAATAAGAAAATGTAAGTTCAATTATATTATATGCACTTATTAATTTTATATATGTTAACCCGCATTTTGGCAAGGCCGCGGACAGACGGATTTAACTTAAACAACTTCACAACTATCGAGACTAAAGTATGATGGGATGGTTCGGCATTAGATGGAGCGCTCGGCATTAACCAACGTTCGGCATCTGGAAACGTTCGACATTGGATGGAGCGCTCGGCATTAACCAACGTTCGGCATCTGGAGACGTTCGGCGTTGGATGGAGCGCTCGGCATTAACCAACGTTCGGCATCTGGAGACGTTCGGCATTGGATGGATCGTTCGGCATCAAGGAGACGTTCGGCATTGGATGGATCGTTCGGCATCAAGGAGCGTTCAGCATTGGATGGATCATTCGGCATCAAGGAGCGTTCAACATTGGATGGATCGTTCGGCATCAAGGAGCGTTCGGCATTGGATGGGTCGTTCGGCATACCTCACCTCGCTCGACATTGCACCTCGCACCTCCATACCTCGCACCTCCATATCTCGCACCTCCATACTCCGCACCTCCATACCTCGCACCTCCATATCTTGGTACCTCCATACTCCGCACCTCCATACCTCGCACCTCCATATCTTGGTACTCCACACCTCCATACCTCGGTACCTCGCACCTCCCAACGTTCGACATGAGGAGATCGATCGGCATTCACACATTGTTCGGCATTCAGCGTTCGGCATTTATGGTTCGGCATATGGAGACCACTCCATTTGGGCTGAGGTACTCGGCTACCAGGCCCACCAGGGAAGTCCAACCCATCTTTGTCTATAAATAGAGAGGCAGGGGCACAGTAAAAAGGGATCTTCTTTCTGCTCTCTTACTTTCTCTTTTCTAAGGCTAAGGCAACTCTGCCATTTTGTAACTGTAATCGATTATTACAGCAATAAAAAGCAAACTTCTGGAGTGGACGTAGGCCGGAGTTAGCCGAACCACTATAAAATCTGTTGTTCTTTACTGCTTTCATTTCAGTTTTAACTGTTCTTTACATTATTACTCTCTACATACATTCTATCTCTGGGCTGTGATTGGTATTTGGTGCCTTAATCTGGATTTTGGGGTTAGTGACCAATTTTGGCGCTAACACTTTGGTGCTTTCACTGAGAGCTGAACTCAGGAACTTTGGAGTTAGGAACTTGGATCCTTGAAAGCAATGGCTAAACCACCAACAAGGAAGCAAGTAGTGGAAAGAAGCAATCAGGAAGGAAGTCAAGCAGCCTCTTCTGGAGCTGGAGAGGATCATGCATCCATCTACATAACTCGGGATGAGATGCAGGCAATGATGAATTCTATGCAGGAGCAGATGATGAAACGACAAGAGGAGATGATGCAGGCTCTTCTCAGGCAATTTGAACAACCAAGAACTGCAGGAGCTCAAGTTCGTGGAACTGGACCAGAGGGACTCAACCAGCGGACAGATGGAGTGATTCAACAGGAGGCAGCTCCCAATCAACAAACAGTTAACAATCTAGATGGACCTAGACTCGGGGGCACACCACCAGTTGATGCTGGACCAGTTCATGGAGGGATACCGGATAACGCTACGCGGCCTGGCATCGATAGGAATACAGGAGTACGTGATGAAGAATATGTGCCAGAATTTCCTCGGGGACTTGGGAGGCAGTCTGGATTAGTTGGAAACACTGGATTGGCTGACATTATTAGGAGGACTATTCGCGGAGGTCTAACAAACAGGGATTCAGAGGGAGTTAACAAAAGTCTGTTTACCCGGAACATCAGGACAGCTAGGAATCCGTCCGATTTCAAACTACCCACTCTGGAAGTATACAACGGGAAGACGGATCCCACCGACCACTTGATGAGGTACACTAGGCATATGGAAGTGCTGGGGGCAACGGAGGAGGTTATGGCCCGATGTTTCCCCCTGTACTTGACTGAAATTGCTGCTATGTGGTTCAGACAGCTGGAGGATGGATCCATTGGAACATGGACAGAACTGGTGGACAAGTTCTTAAGTCAATTTCGAGTTCACATAAAAAGGCCAAAGAACGTGATGACACTAACATCAGTCAAACAGGGGGCAGATGAATCGCTCAGGACATTCTTAACTCGATTTAATGCAGCAGTTGCTTCGGTGGATCGGCCAGATCCATCAATGGTTCTGATGGCTGCGGTATCAGGAGTCAGAGATAATTCGGAGTTCAAAGTATCGTTGGTACGGGACCCACCGTTGGATATTGGGGAATTCTTTCATGAAGCTGAAAGATTTCTTCGACAAGAGGATGCATGTTTGGACATGAGGTCACAGGAAGTAAACATGACTAAGGATGGAAGATTACTCGGCGAAAGCTCAGGTGGGGACAAGGATAAAGGGAAAAGGAAGCGCTGGGGAGAACCAAAGTTCTCCACTTACACAGGATTGAACGCAACGTTGGAGCGGATTTTCTTAGATACTCGAGATCGTCTTCCCTATCGAAGGCCATCAAGGAGGGAACCCACAGAACGTGAAAGGGCATCAGGAAGGCACTGTCTCTTTCATGACCTGGACGGGCATGATACTAACAGCTGCCGACATCTAAAGGATATAATCGAGGAACATATAAGGAATGGTCAGTTGCGACAGTATGTCGGAACTCGGAATGCGGCAGTGGAACATGAACAGCCTCCGCCTACCTTGAACGACGAGGGCGCGAGGCCCAGGAATGGTGACCGATTGGTCATCAACTAATCTTGATGGTTTGGAATAAGTAACAAACTCCGGGCAAACGGTTAAATCACTTACTCATGTACGGGGTCGGAGATAACCCTCAGGCATGCTCTGAGATGATGGCTTACCGAAACGCCCGGGTTTGTGAAATCTGTTTTTTCCTTTGACTTGGACATTTGCTTTTTCTGGTTTGGTTTTGGAGTTTGGTTTGAACTCCCTGTTTTTCTCGTTTTTCTGGTTTGAATGTTTGTTTTTCGGATTGGATTTTGATTGGATTTTCTCTGTATTTTGGCTTAAAGGTCGTCGAGTATGGACTATGCTCGGCAAGGGTCCGGAGCGACCAGGATTCGGCTTAGGACTTAAGCCACGACATTACTTGCGTCCAGGGACACTGGGCCACGGTCGTCAAGTGTGGATTGCGCTTGGCAAGAACCCGGAGAGGTTAGCTCAACGCCCAGGGACACTAGGCCACGGTCGTCAAGTGTGGATTGCGCTTGGCAAGAACCTGGAGAGGTTATCTCAACGTCCAGGGACACTGGACCATGGTCATCAGGTGTGGATTGCGCTTGGCAAGAGCCCGGAGAGGTTATGGATTTGGATATCGACCCGAAGAGGTCCTAAAGTCCCCTATTGGTTATTGGATATGGATGAAACATAGACTTTGGATACTGGACTTAAGGCTATTCAAAACACACCTTTCACAGCAAGACATGTTTTGGGGGGCAAGTGTTAACACGCCTTTTGGCAAGGCCGCGGACAGACGGATTTAACTTAAACAACTTCACAACTATCGAGACTAAAGTATGATGGGATGGTTCGGCATTAGATGGAGCGCTTGGCATTAACCAACGTTCGGCATCTGGAAACGTTCGACATTGGATGGAGCGCTCGGCATTAACCAACGTTCGGCATCTGGAGACGTTCGGCGTTAGATGGAGCGCTCGGCATTAACCAATGTTCGGCATCTGGAGACGTTCGACATTGGATGGATCGTTCGGCATCAAGGAGACGTTCGGCATTGGATGGATCGTTCGGCATCAAGGAGCGTTCAGCATTGGATGGATCGTTCGGCATCAAGGAGCTTTCAGCATTGGATGGATCGTTTGGCATCAAGGAGCGTTCGGCATTGGATGGGTCGTTCGGCATACCTCACCTCGCTCGACATTGCACCTCGCACCTCCATATCTCGCACCTCCATACTCCGCACCTCCATACCTCGCACCTCCATATCTTGGTACCTCCATACTCCGCACCTCCATACCTCGCACCTCCATATCTTGGTACTCCGCACCTCCATACCTCGGTACCTCGCACCTCCCAACGTTCGACATGAGGAGATCGTTCGGCATTCACACATTGTTCGGCATTCAGCGTTCGGCATTTATGGTTCGGCATATGGAGACCACTCCATTTGGGCTGAGGTACTCGGCTACCAGGCCCACCAGGGAAGTCCAACCCATCTTTGTCTATAAATAGAGAGGCAGGGGCACAGTAAAAAGGGATCTTCTTTCTGCTCTCTTACTTTCTCTTTTCTAAGGCTAAGGCAACTCTGCCATTTTGTAACTGTAATCGATTATTACAGCAATAAAAAGCAAACTTCTGGAGTGGACGTAGGCCGGAGTTAGCCGAACCACTATAAAATCTGTTGTTCTTTACTGCTTTCATTTCAGTTTTAACTGTTCTTCACATTATTACTCTCTACATACATTCTATCTCTGGGCTGTGATTGGTATTTGGTGCTTTAATCTGGATTTTGGGGTTAGTGACCAATTTTGGCGCTAACAATATATTGATCAAAATAGTCTTGAACTGTTCTCTTTATACTAAAGAACAAACAAAAACAATTCTAAAAATCAGATTAAATCTAAAGAAAAACTGAAAATTTGAAGTTTTAAAAATAAAATGTTTCACAAATATTTATTTTGAATAGTTCAAAAAATTCCTAAACTTTCAGCTTCTAACACTTTGGATTTCTTTGATTTTTATGAAATAAATAAAAGGACTTCAGTTTATAGATTTTTTAAAAAAAAAAGAGTAAAAGACGAATTTAACTTATTTTATTTTGATTTTCCTTTAGCAATTTAAGGTTTTCCCTGCAGCATTATTTTAATGATGTCTCTTGTCTAATTTTTGTACCCTTTATCAATCATCCACATAAATTGTTAAAAAATCCCAATTCTATACTAAGGTAATTAGAAATTTGTACATCATCGGTATAAATACATATTCCTTTTTCTGTATATAAATATCTACTAGCGTGGTATTGAATTTTTACAAATTATGGATTTTTTTTCTTTGAACAAATTACATATTGTTCGTCATCATCAATATCTTATTCTCAACTGACAGCCGGATGAATTATCATTTTCCATCGTTTAAATCAACAGTTCAGCTGAATTTTAACCGTACAGCTGATACATATTGTTTATAATAAATAAATTCTTAAAGAAGTCCATGATTTATACCAACAGTAAAGATTCAAACTCCTTTTCTGGAAACCGTTTTTTTTATAAATTAAATGAAACAAATTAAGAAAGACAAGAAAATGATGTATAAATCTCACCTTGACTGTTGAATATTGACCAGATTCTATGCTTCGGAGGTTCTCCTAGCACTAGAATACCTCCACATGTTAGGCGTAATATACCGCGACCTGAAACCCGAAAACGTCCTTGTAAGAGAAGAAGGCCACATAATGATGTCTGATTTCGACCTCTTGCTGCGCTGCTCCGTCAGCCCAACCCTAGTAAACTCGCAATCAACCAACTCACTCATCCTCGAAGGCGATCAAGCCGTCCAAAGCTGCATCCAACCATCCTCCTTCTTCACCCGCATCCTCCCCAAACGCAGCCGAAATTCCAAATCCGACTTCGGAGTAGGAAGTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020246619.1	1.3e-119	serine/threonine-protein kinase RHS3-like
Swissprot	Q9LTW5.1	2.7e-93	AGC serine/threonine-protein kinase subfamily 1 member 5
trEMBL	A0A5P1FTM1	9.4e-120	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G79250.1	69.60	1e-98	356	AGC1.7	AGC kinase 1.7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G01902	AT1G79250.2	250	63	2	66	302	110	359	69.60	1e-98	356
AfisC4G01902	AT1G79250.1	250	63	2	66	302	110	359	69.60	1e-98	356
AfisC4G01902	AT3G12690.3	244	69	2	64	303	147	390	70.08	8e-98	353

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	7	40	29.5	8.9e-07
PF00069.22	Pkinase	Domain	103	252	125.5	2.1e-36

Gene Ontology

Accession	Ontology	Name
GO:0000155	F	phosphorelay sensor kinase activity
GO:0000160	P	phosphorelay signal transduction system
GO:0004674	F	protein serine/threonine kinase activity
GO:0005198	F	structural molecule activity
GO:0005524	F	ATP binding
GO:0005525	F	GTP binding
GO:0005730	C	nucleolus
GO:0005874	C	microtubule
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006468	P	protein phosphorylation
GO:0007018	P	microtubule-based movement
GO:0008728	F	GTP diphosphokinase activity
GO:0008893	F	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
GO:0009507	C	chloroplast
GO:0009734	P	auxin-activated signaling pathway
GO:0009860	P	pollen tube growth
GO:0009882	F	blue light photoreceptor activity
GO:0009908	P	flower development
GO:0009925	C	basal plasma membrane
GO:0009958	P	positive gravitropism
GO:0009986	C	cell surface
GO:0010150	P	leaf senescence
GO:0010540	P	basipetal auxin transport
GO:0015970	P	guanosine tetraphosphate biosynthetic process
GO:0015979	P	photosynthesis
GO:0019901	F	protein kinase binding
GO:0040008	P	regulation of growth
GO:0042594	P	response to starvation
GO:0048766	P	root hair initiation
GO:0048767	P	root hair elongation
GO:0048825	P	cotyledon development
GO:0080167	P	response to karrikin
GO:1901981	F	phosphatidylinositol phosphate binding
GO:2000012	P	regulation of auxin polar transport
GO:2000114	P	regulation of establishment of cell polarity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network