result

Gene information

Detail information of AfisC4G02192

Location

Gene	Chr	Start	End	Strand
AfisC4G02192	chr4	407590572	407593574	-

Sequences

CDS

>AfisC4G02192
ATGGGAAATTGTTTGAATTCTTCTTCTTCTTCAGTTCAGAATGCTCTAAGCTCCAATCAAGCTTCAGGTGCTTCAAAATTTGGGAGTAAATCAAACTTATCTTCTATCCGTTCCTCTCAAACATTTTCCAATCCATCTACATTAACAGCGCCTTCTTCAAATGAAAGTCGTAATCTAGAAATTCCTCCTACACCAAGAACTGAAGGAGAAATACTGTCTTCGTCTAATGTGAAGCCATTCACATATAGTGAACTTAAAAGTGCAACACGAAATTTCAGACCCGATGGCCTTATAGGTGAAGGAGGATTTGGCTTTGTATATAAAGGTTGGATTGATGAATATACTTTAGCTCCATCAAAGCCTGGATCTGGTATGATTGTTGCTATCAAGAAGCTTAAACCTGAAGGTTTTCAGGGTCATAAGGAGTGGCTGACAGAGGTTGAGTATCTTGGTCAGCTTTCGCATCCAAACTTAGTTAAGCTCATCGGGTATTGTTTGGATGGTGATAACCGCCTTTTGGTTTATGAATACATGCCTAAAGGAAGTTTGGAGAATCATTTGTTTAGAAGAAGTTCACAGCCACTTTCATGGGCAACTAGAATGAAAGTGGTCGTTGGAGCTGCCAGAGGATTCACATTTTTGCATGATGGTGAATCCCAAGTTATCTTTCGAGACGTTAAGGCTTCGAATATTCTTCTTGATTCGGATTTTAATCCAAAGCTTTCGGACTTTGGGTTGGCAAAAGCTGGTCCGACTGGAGATAATACACACGTATCTACACAAGTGATGGGAACTCATGGTTATGCTGCTCCAGAATATGTCGCCACAGGTCGACTATCAGCAAAAGCAGATGTATACAGCTTTGGTGTGGTACTTTTGGAAATACTTTCAGGGCGGCGAGCCCTTGATAAGAATAGAACGCTAGCAGAGCAAAACCTAGTAGATTGGGCTAGACCTTTTCTCAGAGACAAGAAAAAGCTGTACAAAATAATGGACGCAAGATTGGAGAGTCAGTACTCGAAGAAATCAGCACATGTAGTAGCCAAACTTGCATTAGATTGCATCAACAATGAAGCTCGGTTTAGACCTAAAATGTCTGAGGTGCTAGCAGCACTCGAACCACTTCAGGACCCAAAAGAAATGTTGAAGCAAGCGCAATGCGATTCAGTAAAAGTTGCTCATCCTTTGCCTCAAAAATCACCAATTAGGCATGTTCTTTCTCCCAAGCAACAAAGAGTGCAAAGATAG

Protein

Gene

>AfisC4G02192
TACTGACAACATTTTTACGTGTCAGCATCGAAAATTTAGACAACCAACAGGGGCAATTTTGTCCACAAAATGTTTCATTTGCTTATCAAGTTGTTCTCTTCATTTGGGAAACTTGCTTCTCCTTTCTCTCTCCACGACCGATATTATACTTTATAGTTGAAAATATTCCTTTTTCCTTGAGTAAAAGTTGGAGTCTCGGTGTGGCTCAAATCTTATATTTGAGTGAAAAAAATCTGATAAATAAAGGTTCTCTTGAAAAATAATAGTTAGATTGCTTTTTCGAATTTGTAATTATCGATGGGTAATTCATGAATTTGAGTTTTCAGAATTTACTAGTATGGGAAATTGTTTGAATTCTTCTTCTTCTTCAGTTCAGAATGCTCTAAGCTCCAATCAAGCTTCAGGTTATCTCTTTTATTTTCACAGCTGCGTTTTACTATTGCTTTATTCCATAAAGTATAACTTTTTGTTGCTTGAAAACGATAAAGTGCTTGTTTGCCATTGTGACTGTTTTAGATTGATATGTTAGTTTCATGCGAAATCAAAAATAGAAAACGTTAGTTGACTCCTTTTATTGATTGCCTTTTAATTTTGTTGGCTTTTTATCTCAAATATTTGTTGCATTTTATTATGAACCAACTGTAAAATCATGTGACAAACCTAGTGTTAGATTCGATTAATTGAGGTTTGATGTTAGGAATTGTATATTGCTACAACTATGATTCATGTCTTAGAAAAAACAATAATAACTTCTAAGTTACTCTTTTATCATATAAATGTAACTAGCTGTATTTTAAATTTTTAGGAAGAATTTAAACTCTTCAAAGCTTGCAAATAACTTAAAATATTTCCCTTGATTCTAAAATTCTACAGGTGCTTCAAAATTTGGGAGTAAATCAAACTTATCTTCTATCCGTTCCTCTCAAACATTTTCCAATCCATCTACATTAACAGCGCCTTCTTCAAATGAAAGTCGTAATCTAGAAATTCCTCCTACACCAAGAACTGAAGGAGAAATACTGTCTTCGTCTAATGTGAAGCCATTCACATATAGTGAACTTAAAAGTGCAACACGAAATTTCAGACCCGATGGCCTTATAGGTGAAGGAGGATTTGGCTTTGTATATAAAGGTTGGATTGATGAATATACTTTAGCTCCATCAAAGCCTGGATCTGGTATGATTGTTGCTATCAAGAAGCTTAAACCTGAAGGTTTTCAGGGTCATAAGGAGTGGCTGGTACTCAATAACACACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATGATATGTGTATTTCTTCGTTTTAGTTCAATTCCATTTAAATCTAGTTAATTTTTCATTGCAGACAGAGGTTGAGTATCTTGGTCAGCTTTCGCATCCAAACTTAGTTAAGCTCATCGGGTATTGTTTGGATGGTGATAACCGCCTTTTGGTTTATGAATACATGCCTAAAGGAAGTTTGGAGAATCATTTGTTTAGAAGTGAGTATTGAGCATGCCAATAGATATCTTCTATATATATGTCATCCTTCATAACATATATACTTCATCTGGCAAACACATTGTGCAACTTTATGACACATTACTTACTATAGTTCTAGGACAACTATTAATTTAGACTAAGCATGATATTGTGATTAAAATTTATAGGAAGTTCACAGCCACTTTCATGGGCAACTAGAATGAAAGTGGTCGTTGGAGCTGCCAGAGGATTCACATTTTTGCATGATGGTGAATCCCAAGTTATCTTTCGAGACGTTAAGGCTTCGAATATTCTTCTTGATTCGGTACAACTTTCTTTTACGGTTTGATTTCTCAAATTAAGATCTCCAAATACCTTCATTTTTAAATAAGTTTTTGGGTGCAGGATTTTAATCCAAAGCTTTCGGACTTTGGGTTGGCAAAAGCTGGTCCGACTGGAGATAATACACACGTATCTACACAAGTGATGGGAACTCATGGTTATGCTGCTCCAGAATATGTCGCCACAGGTACTTTTTCTTGCTGAACCCAGCTCTTCTTCAATATCATTTTACTGTTTCTATTTCTTTATAAATACCAAGATTAATGTAATCATAATGGATCCTATATAAATACCAAGAAATCATTCTTTATACCGTCAATTGATTTTTTAATGATGACCAGTTCTTTAATATAGTAATAGAGCAATGATTCAAGTGATATGTCAAGAATAGTCTTATATCCAGAGATTTATCATAGCAATAGATGAATGTTAAAATTTTCAGTTTGTTCTGTGATAATAAATGGTTATTGTATGGCAATTCTTGGAATCTATTTTAGGTCGACTATCAGCAAAAGCAGATGTATACAGCTTTGGTGTGGTACTTTTGGAAATACTTTCAGGGCGGCGAGCCCTTGATAAGAATAGAACGCTAGCAGAGCAAAACCTAGTAGATTGGGCTAGACCTTTTCTCAGAGACAAGAAAAAGCTGTACAAAATAATGGACGCAAGATTGGAGAGTCAGTACTCGAAGAAATCAGCACATGTAGTAGCCAAACTTGCATTAGATTGCATCAACAATGAAGCTCGGTTTAGACCTAAAATGTCTGAGGTGCTAGCAGCACTCGAACCACTTCAGGACCCAAAAGAAATGTTGAAGCAAGCGCAATGCGATTCAGTAAAAGTTGCTCATCCTTTGCCTCAAAAATCACCAATTAGGCATGTTCTTTCTCCCAAGCAACAAAGAGTGCAAAGATAGGATTTTTGGTGGAAAATGAACTGATTTTTACCCCCCCTTTTTCATTCTTTCTTTATTCTTACTTTTATTTTTTGTTCTTGTTGTTAGCTTGGTTGTGATGTTTATAGTATCACCATGTTTTATTAAGACCGCGGTTTACGCATGTACCGATTTATAGAAGACGAGTGTCTGGTTTATAATATGGTAATTTTTTTTGTAATGGTGTTTTTTTATCATAGTTTTCCAATGAATTGTTTTGTAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257329.1	2.4e-169	probable serine/threonine-protein kinase PBL3 isoform X1
Swissprot	O49840.1	3.7e-146	Protein kinase 2B
trEMBL	A0A8B7BLF7	1.1e-155	probable serine/threonine-protein kinase PBL3

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G02800.1	64.96	2e-150	528	APK2B;Kin2	protein kinase 2B

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G02192	AT2G02800.2	411	126	4	1	404	1	400	64.96	2e-150	528
AfisC4G02192	AT2G02800.1	411	126	4	1	404	1	400	64.96	2e-150	528
AfisC4G02192	AT1G14370.1	406	139	5	1	404	1	400	63.79	1e-144	509

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	98	371	158.9	1.3e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009507	C	chloroplast
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network